-
1
-
-
0027239768
-
Grasses as a single genetic system: genome composition, colinearity, and compatibility
-
PID: 8379002, COI: 1:STN:280:DyaK3szpt1ahug%3D%3D
-
Bennetzen JL, Freeling M: Grasses as a single genetic system: genome composition, colinearity, and compatibility. Trends Genet. 1993, 9: 259-261. 10.1016/0168-9525(93)90001-X. DOI: 10.1016/0168-9525(93)90001-X
-
(1993)
Trends Genet
, vol.9
, pp. 259-261
-
-
Bennetzen, J.L.1
Freeling, M.2
-
2
-
-
0029334974
-
Cereal genome evolution. Grasses, line up and form a circle
-
PID: 7583118, COI: 1:CAS:528:DyaK2MXnt1agsrg%3D
-
Moore G, Devos KM, Wang Z, Gale MD: Cereal genome evolution. Grasses, line up and form a circle. Curr Biol. 1995, 5: 737-739. DOI: 10.1016/S0960-9822(95)00148-5
-
(1995)
Curr Biol
, vol.5
, pp. 737-739
-
-
Moore, G.1
Devos, K.M.2
Wang, Z.3
Gale, M.D.4
-
3
-
-
0034096819
-
Synteny: recent advances and future prospects
-
PID: 10712952, COI: 1:CAS:528:DC%2BD3cXisVKjsLc%3D
-
Schmidt R: Synteny: recent advances and future prospects. Curr Opin Plant Biol. 2000, 3: 97-102. 10.1016/S1369-5266(99)00048-5. DOI: 10.1016/S1369-5266(99)00048-5
-
(2000)
Curr Opin Plant Biol
, vol.3
, pp. 97-102
-
-
Schmidt, R.1
-
4
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative: Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature. 2000, 408: 796-815. 10.1038/35048692. DOI: 10.1038/35048692
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
5
-
-
0035110572
-
Arabidopsisgenome sequence as a tool for functional genomics in tomato
-
reviews1003.1
-
Mysore KS, Tuori RP, Martin GB: Arabidopsis genome sequence as a tool for functional genomics in tomato. Genome Biol. 2001, 2: reviews1003.1-1003.4. 10.1186/gb-2001-2-1-reviews1003. DOI: 10.1186/gb-2001-2-1-reviews1003
-
(2001)
Genome Biol
, vol.2
-
-
Mysore, K.S.1
Tuori, R.P.2
Martin, G.B.3
-
6
-
-
0027994623
-
Comparative mapping of Arabidopsis thaliana and Brassica oleraceachromosomes reveals islands of conserved organization
-
PID: 7828831, COI: 1:CAS:528:DyaK2MXmtFaqs78%3D
-
Kowalski SP, Lan T-H, Feldmann KA, Paterson AH: Comparative mapping of Arabidopsis thaliana and Brassica oleracea chromosomes reveals islands of conserved organization. Genetics. 1994, 138: 499-510.
-
(1994)
Genetics
, vol.138
, pp. 499-510
-
-
Kowalski, S.P.1
Lan, T.-H.2
Feldmann, K.A.3
Paterson, A.H.4
-
7
-
-
0031238680
-
Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4using rice as an intergenomic cloning vehicle
-
PID: 9291972, COI: 1:CAS:528:DyaK2sXlvVGgt7s%3D
-
Kilian A, Chen J, Han F, Steffenson B, Kleinhofs A: Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4 using rice as an intergenomic cloning vehicle. Plant Mol Biol. 1997, 35: 187-195. 10.1023/A:1005768222615. DOI: 10.1023/A:1005768222615
-
(1997)
Plant Mol Biol
, vol.35
, pp. 187-195
-
-
Kilian, A.1
Chen, J.2
Han, F.3
Steffenson, B.4
Kleinhofs, A.5
-
8
-
-
0026482438
-
High density molecular linkage maps of the tomato and potato genomes
-
PID: 1360934, COI: 1:STN:280:DyaK3s%2FptlCguw%3D%3D
-
Tanksley SD, Ganal MW, Prince JP, de Vivente MC, Bonierbale MW, Broun P, Fulton TM, Giovannoni JJ, Grandillo S, Martin GB: High density molecular linkage maps of the tomato and potato genomes. Genetics. 1992, 132: 1141-1160.
-
(1992)
Genetics
, vol.132
, pp. 1141-1160
-
-
Tanksley, S.D.1
Ganal, M.W.2
Prince, J.P.3
de Vivente, M.C.4
Bonierbale, M.W.5
Broun, P.6
Fulton, T.M.7
Giovannoni, J.J.8
Grandillo, S.9
Martin, G.B.10
-
9
-
-
0032779774
-
Genome mapping in Capsicumand the evolution of genome structure in the Solanaceae
-
PID: 10388833, COI: 1:CAS:528:DyaK1MXltVWnsbs%3D
-
Livingstone KD, Lackney VK, Blauth JR, van Wijk R, Jahn MK: Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae. Genetics. 1999, 152: 1183-1202.
-
(1999)
Genetics
, vol.152
, pp. 1183-1202
-
-
Livingstone, K.D.1
Lackney, V.K.2
Blauth, J.R.3
van Wijk, R.4
Jahn, M.K.5
-
10
-
-
0034255126
-
Comparing sequenced segments of the tomato and Arabidopsisgenomes: large-scale duplication followed by selective gene loss creates a network of synteny
-
PID: 10908680, COI: 1:CAS:528:DC%2BD3cXls12ks70%3D
-
Ku H-M, Vision T, Liu J, Tanksley SD: Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. Proc Natl Acad Sci USA. 2000, 97: 9121-9126. 10.1073/pnas.160271297. DOI: 10.1073/pnas.160271297
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 9121-9126
-
-
Ku, H.-M.1
Vision, T.2
Liu, J.3
Tanksley, S.D.4
-
11
-
-
0035032414
-
Comparative sequence analysis reveals extensive microcolinearity in the Lateral suppressor regions of the tomato, Arabidopsis, and Capsellagenomes
-
PID: 11283350, COI: 1:CAS:528:DC%2BD3MXjtFajsrc%3D
-
Rossberg M, Theres K, Acarkana A, Herrero R, Schmitt T, Schumacher K, Schmitz G, Schmidt R: Comparative sequence analysis reveals extensive microcolinearity in the Lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. Plant Cell. 2001, 13: 979-988. 10.1105/tpc.13.4.979. DOI: 10.1105/tpc.13.4.979
-
(2001)
Plant Cell
, vol.13
, pp. 979-988
-
-
Rossberg, M.1
Theres, K.2
Acarkana, A.3
Herrero, R.4
Schmitt, T.5
Schumacher, K.6
Schmitz, G.7
Schmidt, R.8
-
12
-
-
0034636168
-
Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis
-
PID: 10759555, COI: 1:CAS:528:DC%2BD3cXislSguro%3D
-
Grant D, Cregan P, Shoemaker RC: Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis. Proc Natl Acad Sci USA. 2000, 97: 4168-4173. 10.1073/pnas.070430597. DOI: 10.1073/pnas.070430597
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 4168-4173
-
-
Grant, D.1
Cregan, P.2
Shoemaker, R.C.3
-
13
-
-
0000566957
-
Insensitivity of the diageotropicatomato mutant to auxin
-
PID: 16665098, COI: 1:CAS:528:DyaL2sXhsFyktQ%3D%3D
-
Kelly MO, Bradford KJ: Insensitivity of the diageotropica tomato mutant to auxin. Plant Physiol. 1986, 82: 713-717. DOI: 10.1104/pp.82.3.713
-
(1986)
Plant Physiol
, vol.82
, pp. 713-717
-
-
Kelly, M.O.1
Bradford, K.J.2
-
14
-
-
0032057637
-
The diageotropicagene differentially affects auxin and cytokinin responses throughout development in tomato
-
PID: 9576775, COI: 1:CAS:528:DyaK1cXjsFSksLY%3D
-
Coenen C, Lomax TL: The diageotropica gene differentially affects auxin and cytokinin responses throughout development in tomato. Plant Physiol. 1998, 117: 63-72. 10.1104/pp.117.1.63. DOI: 10.1104/pp.117.1.63
-
(1998)
Plant Physiol
, vol.117
, pp. 63-72
-
-
Coenen, C.1
Lomax, T.L.2
-
15
-
-
0029360583
-
The diageotropicamutation and synthetic auxins differentially affect the expression of auxin-regulated genes in tomato
-
PID: 7480327, COI: 1:CAS:528:DyaK2MXotFWmsbo%3D
-
Mito N, Bennett AB: The diageotropica mutation and synthetic auxins differentially affect the expression of auxin-regulated genes in tomato. Plant Physiol. 1995, 109: 293-297. 10.1104/pp.109.1.293. DOI: 10.1104/pp.109.1.293
-
(1995)
Plant Physiol
, vol.109
, pp. 293-297
-
-
Mito, N.1
Bennett, A.B.2
-
16
-
-
0033749255
-
The diageotropica mutation alters auxin induction of a subset of the AUX/IAAgene family in tomato
-
PID: 11094981
-
Nebenführ A, White TJ, Lomax TL: The diageotropica mutation alters auxin induction of a subset of the AUX/IAA gene family in tomato. Plant Mol Biol. 2000, 44: 73-84. 10.1023/A:1006437205596. DOI: 10.1023/A:1006437205596
-
(2000)
Plant Mol Biol
, vol.44
, pp. 73-84
-
-
Nebenführ, A.1
White, T.J.2
Lomax, T.L.3
-
17
-
-
0034072438
-
The auxin-resistant diageotropicamutant of tomato responds to gravity via an auxin-mediated pathway
-
PID: 10872221, COI: 1:CAS:528:DC%2BD3cXjtVWrt7w%3D
-
Rice MS, Lomax TL: The auxin-resistant diageotropica mutant of tomato responds to gravity via an auxin-mediated pathway. Planta. 2000, 210: 906-913. 10.1007/s004250050696. DOI: 10.1007/s004250050696
-
(2000)
Planta
, vol.210
, pp. 906-913
-
-
Rice, M.S.1
Lomax, T.L.2
-
18
-
-
85182658678
-
-
The Arabidopsis Information Resource. [http://www.Arabidopsis.org/Blast]
-
-
-
-
19
-
-
0033891353
-
Extensive duplication and reshuffling in the Arabidopsisgenome
-
PID: 10899976, COI: 1:CAS:528:DC%2BD3cXlslygtL0%3D
-
Blanc G, Barakat A, Guyot R, Cooke R, Delseney M: Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell. 2000, 12: 1093-1101. 10.1105/tpc.12.7.1093. DOI: 10.1105/tpc.12.7.1093
-
(2000)
Plant Cell
, vol.12
, pp. 1093-1101
-
-
Blanc, G.1
Barakat, A.2
Guyot, R.3
Cooke, R.4
Delseney, M.5
-
21
-
-
0035252409
-
Duplicate and diverge: the evolution of plant genome microstructure
-
PID: 11173118, COI: 1:CAS:528:DC%2BD3MXhtFaku78%3D
-
Bancroft I: Duplicate and diverge: the evolution of plant genome microstructure. Trends Genet. 2001, 17: 89-93. 10.1016/S0168-9525(00)02179-X. DOI: 10.1016/S0168-9525(00)02179-X
-
(2001)
Trends Genet
, vol.17
, pp. 89-93
-
-
Bancroft, I.1
-
22
-
-
0033869323
-
Comparative sequence analysis of plant nuclear genomes: microcolinearity and its many exceptions
-
PID: 10899971, COI: 1:CAS:528:DC%2BD3cXlslygt7Y%3D
-
Bennetzen JL: Comparative sequence analysis of plant nuclear genomes: microcolinearity and its many exceptions. Plant Cell. 2000, 12: 1021-1029. 10.1105/tpc.12.7.1021. DOI: 10.1105/tpc.12.7.1021
-
(2000)
Plant Cell
, vol.12
, pp. 1021-1029
-
-
Bennetzen, J.L.1
-
23
-
-
16144364971
-
Toward a unified map of higher plant chromosomes, transcending the monocot-dicot divergence
-
PID: 8944014, COI: 1:CAS:528:DyaK28XntlGitLo%3D
-
Paterson AH, Lan TH, Reischmann KP, Chang C, Lin YR: Toward a unified map of higher plant chromosomes, transcending the monocot-dicot divergence. Nat Genet. 1996, 14: 380-382. DOI: 10.1038/ng1296-380
-
(1996)
Nat Genet
, vol.14
, pp. 380-382
-
-
Paterson, A.H.1
Lan, T.H.2
Reischmann, K.P.3
Chang, C.4
Lin, Y.R.5
-
24
-
-
0032076003
-
Comparative mapping of the Brassica S locus region and its homeolog in Arabidopsis: implications for the evolution of mating systems in the Brassicaceae
-
PID: 9596638, COI: 1:CAS:528:DyaK1cXjs1ehsbk%3D
-
Conner JA, Conner P, Nasrallah ME, Nasrallah JB: Comparative mapping of the Brassica S locus region and its homeolog in Arabidopsis: implications for the evolution of mating systems in the Brassicaceae. Plant Cell. 1998, 10: 801-812. 10.1105/tpc.10.5.801. DOI: 10.1105/tpc.10.5.801
-
(1998)
Plant Cell
, vol.10
, pp. 801-812
-
-
Conner, J.A.1
Conner, P.2
Nasrallah, M.E.3
Nasrallah, J.B.4
-
25
-
-
0033935102
-
An EST-enriched comparative map of Brassica oleracea and Arabidopsis thaliana
-
PID: 10854410, COI: 1:CAS:528:DC%2BD3cXkt1eisLs%3D
-
Lan TH, DelMonte TA, Reischmann KP, Hyman J, Kowalski SP, McFerson J, Kresovich S, Paterson A: An EST-enriched comparative map of Brassica oleracea and Arabidopsis thaliana. Genome Res. 2000, 10: 776-788. 10.1101/gr.10.6.776. DOI: 10.1101/gr.10.6.776
-
(2000)
Genome Res
, vol.10
, pp. 776-788
-
-
Lan, T.H.1
DelMonte, T.A.2
Reischmann, K.P.3
Hyman, J.4
Kowalski, S.P.5
McFerson, J.6
Kresovich, S.7
Paterson, A.8
-
26
-
-
0034014008
-
Comparative genetics of nucleotide binding site-leucine rich repeat resistance gene homologues in the genomes of two dicotyledons: tomato and Arabidopsis
-
PID: 10790405, COI: 1:CAS:528:DC%2BD3cXjslKhtL0%3D
-
Pan Q, Liu Y-S, Budai-Hadrian O, Selan M, Carmel-Goren L, Zamir D, Fluhr R: Comparative genetics of nucleotide binding site-leucine rich repeat resistance gene homologues in the genomes of two dicotyledons: tomato and Arabidopsis. Genetics. 2000, 155: 309-322.
-
(2000)
Genetics
, vol.155
, pp. 309-322
-
-
Pan, Q.1
Liu, Y.-S.2
Budai-Hadrian, O.3
Selan, M.4
Carmel-Goren, L.5
Zamir, D.6
Fluhr, R.7
-
27
-
-
0032773155
-
A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map
-
PID: 10388831, COI: 1:CAS:528:DyaK1MXltVWnsb0%3D
-
Davis GL, McMullen MD, Baysdorfer C, Musket T, Grant D, Staebell M, Xu G, Polacco M, Koster L, Melia-Hancock S, et al: A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map. Genetics. 1999, 152: 1137-1172.
-
(1999)
Genetics
, vol.152
, pp. 1137-1172
-
-
Davis, G.L.1
McMullen, M.D.2
Baysdorfer, C.3
Musket, T.4
Grant, D.5
Staebell, M.6
Xu, G.7
Polacco, M.8
Koster, L.9
Melia-Hancock, S.10
-
28
-
-
0035165581
-
The TIGR gene indices: analysis of gene transcript sequences in highly sampled eukaryotic species
-
PID: 11125077, COI: 1:CAS:528:DC%2BD3MXjtlWnu7g%3D
-
Quackenbush J, Cho J, Lee D, Liang F, Holt I, Karamycheva S, Parvizi B, Pertea G, Sultana R, White J: The TIGR gene indices: analysis of gene transcript sequences in highly sampled eukaryotic species. Nucleic Acid Res. 2001, 29: 159-164. 10.1093/nar/29.1.159. DOI: 10.1093/nar/29.1.159
-
(2001)
Nucleic Acid Res
, vol.29
, pp. 159-164
-
-
Quackenbush, J.1
Cho, J.2
Lee, D.3
Liang, F.4
Holt, I.5
Karamycheva, S.6
Parvizi, B.7
Pertea, G.8
Sultana, R.9
White, J.10
-
29
-
-
0035106055
-
Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes
-
PID: 11244114, COI: 1:CAS:528:DC%2BD3MXitFWrtLg%3D
-
Dubcovsky J, Ramakrishna W, SanMiguel PJ, Busso CS, Liuling Y, Shiloff BA, Bennetzen JL: Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes. Plant Physiol. 2001, 125: 1342-1353. 10.1104/pp.125.3.1342. DOI: 10.1104/pp.125.3.1342
-
(2001)
Plant Physiol
, vol.125
, pp. 1342-1353
-
-
Dubcovsky, J.1
Ramakrishna, W.2
SanMiguel, P.J.3
Busso, C.S.4
Liuling, Y.5
Shiloff, B.A.6
Bennetzen, J.L.7
-
30
-
-
0023462635
-
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
-
PID: 3480529, COI: 1:CAS:528:DyaL1cXovVyktQ%3D%3D
-
Wolfe KH, Li W-H, Sharp PM: Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA. 1987, 84: 9054-9058. DOI: 10.1073/pnas.84.24.9054
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 9054-9058
-
-
Wolfe, K.H.1
Li, W.-H.2
Sharp, P.M.3
-
31
-
-
0034084963
-
The complete sequence of 340 kb of DNA around the rice Adh1-Adh2region reveals interrupted colinearity with maize chromosome 4
-
PID: 10715324, COI: 1:CAS:528:DC%2BD3cXktFWju78%3D
-
Tarchini R, Biddle P, Wineland R, Tingey S, Rafalski A: The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted colinearity with maize chromosome 4. Plant Cell. 2000, 12: 381-392. 10.1105/tpc.12.3.381. DOI: 10.1105/tpc.12.3.381
-
(2000)
Plant Cell
, vol.12
, pp. 381-392
-
-
Tarchini, R.1
Biddle, P.2
Wineland, R.3
Tingey, S.4
Rafalski, A.5
-
32
-
-
0034888702
-
Exploitation of Arabidopsis-tomato synteny to construct a high-resolution map of the ovate-containing region in tomato chromosome 2
-
PID: 11444707, COI: 1:CAS:528:DC%2BD3MXltFWjsbc%3D
-
Ku HM, Liu J, Doganlar S, Tanksley SD: Exploitation of Arabidopsis-tomato synteny to construct a high-resolution map of the ovate-containing region in tomato chromosome 2. Genome. 2001, 44: 470-475. 10.1139/gen-44-3-470. DOI: 10.1139/g01-024
-
(2001)
Genome
, vol.44
, pp. 470-475
-
-
Ku, H.M.1
Liu, J.2
Doganlar, S.3
Tanksley, S.D.4
-
33
-
-
0027650566
-
A procedure for mapping Arabidopsismutations using co-dominant ecotype specific PCR-based markers
-
PID: 8106085, COI: 1:CAS:528:DyaK2cXht1Khtbo%3D
-
Konieczny A, Ausubel FM: A procedure for mapping Arabidopsis mutations using co-dominant ecotype specific PCR-based markers. Plant J. 1993, 4: 403-410. 10.1046/j.1365-313X.1993.04020403.x. DOI: 10.1046/j.1365-313X.1993.04020403.x
-
(1993)
Plant J
, vol.4
, pp. 403-410
-
-
Konieczny, A.1
Ausubel, F.M.2
-
34
-
-
85182701647
-
-
Primer3
-
Primer3. [http://www-genome.wi.mit.edu/cgi-bin/primer/primer3_www.cgi]
-
-
-
-
35
-
-
51249186914
-
A plant DNA minipreparation: version II
-
COI: 1:CAS:528:DyaL2cXksFWhtrk%3D
-
Dellaporta SL, Wood J, Hicks JB: A plant DNA minipreparation: version II. Plant Mol Biol Rep. 1983, 1: 19-21. DOI: 10.1007/BF02712670
-
(1983)
Plant Mol Biol Rep
, vol.1
, pp. 19-21
-
-
Dellaporta, S.L.1
Wood, J.2
Hicks, J.B.3
-
36
-
-
0027527885
-
Rapid purification of high-activity TaqDNA polymerase
-
PID: 8233838, COI: 1:CAS:528:DyaK2cXis1SqtA%3D%3D
-
Pluthero FG: Rapid purification of high-activity Taq DNA polymerase. Nucleic Acid Res. 1993, 21: 4850-4851. DOI: 10.1093/nar/21.20.4850
-
(1993)
Nucleic Acid Res
, vol.21
, pp. 4850-4851
-
-
Pluthero, F.G.1
-
37
-
-
0033977088
-
A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing
-
PID: 10645957, COI: 1:CAS:528:DC%2BD3cXpsl2jug%3D%3D
-
Budiman MA, Mao L, Wood TC, Wing RA: A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing. Genome Res. 2000, 10: 129-136.
-
(2000)
Genome Res
, vol.10
, pp. 129-136
-
-
Budiman, M.A.1
Mao, L.2
Wood, T.C.3
Wing, R.A.4
-
38
-
-
85182671935
-
-
Clemson University Genome Institute. [http://www.genome.clemson.edu]
-
-
-
-
39
-
-
0004136246
-
-
Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY,. 1989
-
(1989)
Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
40
-
-
0040241402
-
Genomic sequencing
-
PID: 6326095, COI: 1:CAS:528:DyaL2cXkt1Sit7k%3D
-
Church GM, Gilbert W: Genomic sequencing. Proc Natl Acad Sci USA. 1984, 81: 1991-1995. DOI: 10.1073/pnas.81.7.1991
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 1991-1995
-
-
Church, G.M.1
Gilbert, W.2
|