Comparative mapping of the Brassica S locus region and its homeolog in Arabidopsis: Implications for the evolution of mating systems in the Brassicaceae

Plant Cell

Volumn 10, Issue 5, 1998, Pages 801-812

  Conner, Joann A ^a,b   Conner, Patrick ^a,b   Nasrallah, Mikhail E ^a   Nasrallah, June B ^a  

^a Cornell University ^*  (United States)

^b UNIVERSITY OF MARYLAND   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; COMPLEMENTARY DNA; ETHYLENE; GENE LOCUS; GENE MAPPING; GENETIC MARKER; HAPLOTYPE; HOMOZYGOSITY; PLANT GENETICS;

BRASSICA;

EID: 0032076003     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.10.5.801     Document Type: Article

References (64)

1. Ahn, S., Anderson, J.A., Sorrels, M.E., and Tanksley, S.D. (1993). Homoeologous relationships of rice, wheat and maize chromosomes. Mol. Gen. Genet. 241, 483-490.
2. Baker, H.G. (1955). Self-compatibility and establishment after "long-distance" dispersal. Evolution 9, 347-348.
3. Boyes, D.C., and Nasrallah, J.B. (1993). Physical linkage of the SLG and SRK genes at the self-incompatibility locus of Brassica oleracea. Mol. Gen. Genet. 236, 369-373.
4. Boyes, D.C., and Nasrallah, J.B. (1995). An anther-specific gene encoded by an S locus haplotype of Brassica produces complementary and differentially regulated transcripts. Plant Cell 7, 1283-1294.
5. Boyes, D.C., Nasrallah, M.E., Vrebalov, J., and Nasrallah, J.B. (1997). The self-incompatibility (S) haplotypes of Brassica contain highly divergent and rearranged sequences of ancient origin. Plant Cell 9, 237-247.
6. Chang, C., Kwok, S.F., Bleecker, A.B., and Meyerowitz, E.M. (1993). Arabidopsis ethylene-response gene ETR1: Similarity of product to two-component regulators. Science 262, 539-541.
7. Charlesworth, D. (1985). Distribution of dioecy and self-incompatibility in angiosperms. In Evolution - Essays in Honour of John Maynard Smith, J.J. Greenwood and M. Slatkin, eds (Cambridge, UK: Cambridge University Press), pp. 237-268.
8. Charlesworth, D., and Charlesworth, B. (1979). The evolution and breakdown of S-allele systems. Heredity 43, 41-55.
9. Charlesworth, D., Morgan, M.T., and Charlesworth, B. (1990). inbreeding depression with heterozygote advantage and its effect on selection of modifiers changing the outcrossing rate. Evolution 44, 870-888.
10. Chen, E.Y., and Seeburg, P.M. (1985). Supercoil sequencing: A fast and simple method for sequencing plasmid DNA. DNA 4, 165-170.
11. Chen, M., SanMiguel, P., de Oliveira, A.C., Woo, S.-S., Zhang, H., Wing, R.A., and Bennetzen, J.L. (1997). Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes. Proc. Natl. Acad. Sci. USA 94, 3431-3435.
12. Choi, S., Creelman, R.A., Muller, J.E., and Wing, R.A. (1995). Construction and characterization of a bacterial artificial chromosome library of Arabidopsis thaliana. Plant Mol. Biol, Rep. 13, 124-128.
13. Conner, J.A., Tantikanjana, T., Stein, J.C., Kandasamy, M.K., Nasrallah, J.B., and Nasrallah, M.E. (1997). Transgene-induced silencing of S-locus genes and related genes in Brassica. Plant J. 11, 809-823.
14. Darling, S.M., and Abbott, C.M. (1992). Mouse models of human single gene disorders. I. Non-transgenic mice. Bioessays 14, 359-366.
15. de Nettancourt, D. (1977). Incompatibility in Angiosperms. Monographs on Theoretical and Applied Genetics 3. (Berlin: Springer-Verlag).
16. Dietrich, W.F., Copeland, N.G., Gilbert, D.J., Miller, J.C., Jenkins, N.A., and Lander, E.S. (1995). Mapping the mouse genome: Current status and future prospects. Proc. Natl. Acad. Sci. USA 92, 10849-10853.
17. Dunford, R.P., Kurata, N., Laurie, D.A., Money, T.A., Minobe, Y., and Moore, G. (1995). Conversion of fine-scale DNA marker order in the genomes of rice and the Triticeae. Nucleic Acids Res, 23, 2724-2728.
18. Dwyer, K.G., Balent, M.A., Nasrallah, J.B., and Nasrallah, M.E. (1991). DNA sequences of self-incompatibility genes from Brassica campestris and B. oleracea: Polymorphism predating speciation. Plant Mol. Biol. 16, 481-486.
19. Dwyer, K.G., Lalonde, B.A., Nasrallah, J.B., and Nasrallah, M.E. (1992). Structure and expression of AtS1, an Arabidopsis thaliana gene homologous to the S-locus related genes of Brassica. Mol. Gen. Genet. 231, 442-448.
20. Dwyer, K.G., Kandasamy, M.K., Mahosky, D.I., Acciai, J., Kudish, B.I., Miller, J.E., Nasrallah, M.E., and Nasrallah, J.B. (1994). A superfamily of S locus-related sequences in Arabidopsis: Diverse structures and expression patterns. Plant Cell 6, 1829-1843.
21. Feinberg, A.P., and Vogelstein, B. (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
22. Fisher, R.A. (1941). Average excess and average effect of a gene substitution. Ann. Eugen. 11, 53-63.
23. Goring, D.R., Glavin, T.L., Schafer, U., and Rothstein, S.J. (1993). An S receptor kinase gene in self-compatible Brassica napus has a 1-bp deletion. Plant Cell 5, 531-539.
24. Green, P.J. (1994). The ribonucleases of higher plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 45, 421-445.
25. Grill, E., and Somerville, C. (1991). Construction and characterization of a yeast artificial chromosome library of Arabidopsis which is suitable for chromosome walking. Mol. Gen. Genet. 226, 484-490.
26. Hinata, K., Okasaki, K., and Nishio, T. (1983). Gene analysis of self-incompatibility in Brassica campestris var. Yellow Sarson (a case of recessive epistatic modifier). In Proceedings of the Sixth International Rapeseed Conference, Paris, Vol. 1, pp. 354-359.
27. Ioannou, P.A., Amemiya, C.T., Games, J., Kroisel, P.M., Shizuya, H., Chen, C., Batzer, M.A., and de Jong, P.J. (1994). A new bacteriophage Pl-derived vector for the propagation of farge human DNA fragments. Nature Genet. 6, 84-89.
28. Kilian, A., Kudrna, D.A., Kleinhofs, A., Yano, M., Kurata, N., Steffenson, B., and Sasaki, T. (1995). Rice-barley synteny and its application to saturation mapping of the barley Rpg1 region. Nucleic Acids Res. 23, 2729-2733.
29. Kowalski, S.P., Lan, T., Feldmann, K.A., and Paterson, A.H. (1994). Comparative mapping of Arabidopsis thaliana and Brassica oleracea: Chromosomes reveal islands of conserved organization. Genetics 138, 499-510.
30. Krishnan, B.R., Blakesley, R.W., and Berg, D.E. (1991). Linear amplification DNA sequencing directly from single phage plaques and bacterial colonies. Nucleic Acids Res, 19, 1153.
31. Kumar, V., and Trick, M. (1994). Expression of the S-locus receptor kinase multigene family in Brassica oleracea. Plant J. 6, 807-813.
32. Lagercrantz, U., Putterill, J., Coupland, G., and Lydiate, D. (1996). Comparative mapping in Arabidopsis and Brassica, fine scale genome collinearrty and congruence of genes controlling flowering time. Plant J. 9, 13-20.
33. Lalonde, B.A., Nasrallah, M.E., Dwyer, K.G., Chen, C.-H., Barlow, B., and Nasrallah, J.B. (1989). A highly conserved Brassica gene with homology to the S-locus specific glycoprotein structural gene. Plant Cell 1, 249-258.
34. Lande, R., and Schemske, D.W. (1985). The evolution and self-fertilization and inbreeding depression in plants. I. Genetic models. Evolution 39, 24-40.
35. Lander, E., Green, P., Abrahamson, J., Barlow, A., Daley, M., Lincoln, S., and Newburg, L. (1987). MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174-181.
36. Letham, D.L.D., and Nasrallah, J.B. (1998). A ClpP homolog linked to the Brassica self-incompatibility (S) locus. Sex. Plant Reprod., in press.
37. Levin, D.A. (1996). The evolutionary significance of pseudo-self-fertility. Am. Nat. 148, 321-332.
38. Lewis, D., and Crowe, L.K. (1958). Unilateral incompatibility in flowering plants. Heredity 12, 233-256.
39. Lister, C., and Dean, C. (1993). Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J. 4, 745-750.
40. Nasrallah, J.B., and Nasrallah, M.E. (1993). Pollen-stigma signaling in the sporophytic self-incompatibility response. Plant Cell 5, 1325-1335.
41. Nasrallah, J.B., Kao, T.-H., Goldberg, M.L., and Nasrallah, M.E. (1985). A cDNA clone encoding an S-locus specific glycoprotein from Brassica oleracea. Nature 318, 263-267.
42. Nasrallah, J.B., Rundle, S.J., and Nasrallah, M.E. (1994a). Genetic evidence for the requirement of the Brassica S-locus receptor kinase gene in the self-incompatibility response. Plant J. 5, 373-384.
43. Nasrallah, J.B., Stein, J.C., Kandasamy, M.K., and Nasrallah, M.E. (1994b). Signaling the arrest of pollen tube development in self-incompatible plants. Science 266, 1505-1508.
44. Nasrallah, M.E. (1974). Genetic control of quantitative variation in self-incompatibility proteins detected by immunodiffusion. Genetics 76, 45-50.
45. Nasrallah, M.E., Kandasamy, M.K., and Nasrallah, J.B. (1992). A genetically defined frans-acting locus regulates S-locus function in Brassica. Plant J. 2, 497-506.
46. Pasero, P., and Marilley, M. (1993). Size variation of rDNA clusters in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe. Mol. Gen. Genet. 236, 448-452.
47. Pastuglia, M., Roby, D., Dumas, C., and Cock, J.M. (1997). Rapid induction by wounding and bacterial infection of an S gene family receptor-like kinase gene in Brassica oleracea. Plant Cell 9, 49-60.
48. Price, R.A., Palmer, J.D., and Al-Shehbaz, I.A. (1994). Systematic relationships of Arabidopsis: A molecular and morphological perspective. In Arabidopsis, E.M. Meyerowitz and C. Somerville, eds (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press), pp. 7-19.
49. Sadowski, J., Gaubier, P., Delseny, M., and Quiros, C.F. (1996). Genetic and physical mapping in Brassica diploid species of a gene cluster defined in Arabidopsis thaliana. Mol. Gen. Genet. 251, 298-306.
50. Sanger, R., Nicklen, S., and Coulson, A.R. (1977). DNA sequencing with chain-termination inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467.
51. Southern, E.M. (1975). Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98, 503-517.
52. Stebbins, G.L. (1957). Self-fertilization and population variability in the higher plants. Am. Nat. 91, 337-354.
53. Stein, J.C., Hewlett, B., Boyes, D.C., Nasrallah, M.E., and Nasrallah, J.B. (1991). Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea. Proc. Natl. Acad. Sci. USA 88, 8816-8820.
54. Tanksley, S.D., Ganal, M.W., Prince, J.P., de Vicente, M.C., Bonierbale, M.W., Broun, P., Fulton, T.M., Giovannoni, J.J., Grandillo, S., Martin, G.B., Messeguer, R., Miller, J.C., Miller, L., Paterson, A.M., Pineda, O., Roder, M.S., Wing, R.A., Wu, W., and Young, N.D. (1992). High density molecular linkage maps of the tomato and potato genomes. Genetics 132, 1141-1160.
55. Tobias, C.M. (1995). Characterization of an Arabidopsis thaliana Gene That Encodes a Receptor Protein Kinase Potentially Involved in Signaling Events at the Plasma Membrane. PhD Dissertation (Ithaca, NY: Cornell University).
56. Tobias, C.M., Howlett, B., and Nasrallah, J.B. (1992). An Arabidopsis thaliana gene with sequence similarity to the S-locus receptor kinase gene of Brassica oleracea. Plant Physiol. 99, 284-290.
57. Uyenoyama, M.K. (1995). A generalized least-squares estimate for the origin of sporophytic self-incompatibility. Genetics 139, 975-992.
58. Van Deynze, A.E., Nelson, J.C., Yglesias, E.S., Harrington, S.E., Braga, D.P., McCouch, S.R., and Sorrells, M.E. (1995). Comparative mapping in grasses: Wheat relationships. Mol. Gen. Genet. 248, 744-754.
59. Van Treuren, R., Kuittinen, H., Karkkainen, K., Baena-Gonzalez, E., and Savolainen, O. (1997). Evolution of microsatellites in Arabis petrea and Arabis lyrata, outcrossing relatives of Arabidopsis thaliana. Mol. Biol. Evol. 14, 220-229.
60. Walker, J.C. (1993). Receptor-like protein kinase genes from Arabidopsis thaliana. Plant J. 3, 451-456.
61. Ward, E.R., and Jen, G.G. (1990). Isolation of single-copy-sequence clones from a yeast artificial chromosome library of randomly sheared Arabidopsis thaliana DNA. Plant Mol. Biol. 14, 561-568.
62. Weller, S.G., Donoghue, M.J., and Charlesworth, D. (1993). The evolution of self-incompatibility in flowering plants: A phylogenetic approach. In Experimental and Molecular Approaches to Plant Biosystematics, Monographs in Systematic Botany, Vol. 53, P.C. Hoch and A.G. Stephensen, eds (St Louis, MO: Missouri Botanical Garden), pp. 355-382.
63. Yu, K., Schafer, U., Glavin, T.L., Goring, D.R., and Rothstein, S.J. (1996). Molecular characterization of the S locus in two self-incompatible Brassica napus lines. Plant Cell 8, 2369-2380.
64. Zhang, H.-B., Zhao, X., Ding, X., Paterson, A.M., and Wing, R.A. (1995). Preparation of megabase-size DNA from plant nuclei. Plant J. 7, 175-184.