SCOPUS 정보 검색 플랫폼

Biochemistry

Volumn 41, Issue 3, 2002, Pages 869-880

Experimentally derived nearest-neighbor parameters for the stability of RNA three- and four-way multibranch loops

(2) Mathews, David H a Turner, Douglas H a

a UNIVERSITY OF ROCHESTER (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MULTIBRANCH LOOPS;

ALGORITHMS; FREE ENERGY; RNA; STABILITY; STRAIN;

BIOCHEMISTRY;

RNA;

ALGORITHM; ARTICLE; LINEAR REGRESSION ANALYSIS; MELTING POINT; PRIORITY JOURNAL; RNA STABILITY; RNA STRUCTURE; SEQUENCE ANALYSIS; THERMODYNAMICS;

ALGORITHMS; BASE SEQUENCE; DRUG STABILITY; INDICATORS AND REAGENTS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; NUCLEIC ACID DENATURATION; NUCLEIC ACID HETERODUPLEXES; RNA; THERMODYNAMICS;

BONUS;

EID: 0037154101 PISSN: 00062960 EISSN: None Source Type: Journal
DOI: 10.1021/bi011441d Document Type: Article

Times cited : (73)

References (69)

1
- 0031804156
- (1998) Nucleic Acids Res. , vol.26 , pp. 148-153
- Sprinzl, M.¹ Horn, C.² Brown, M.³ Ioudovitch, A.⁴ Steinberg, S.⁵

2
- 0031866152
- (1998) Nucleic Acids Res. , vol.26 , pp. 156-159
- Szymanski, M.¹ Specht, T.² Barciszewska, M.Z.³ Barciszewski, J.⁴ Erdmann, V.A.⁵

3
- 0027225783
- (1993) Nucleic Acids Res. , vol.21 , pp. 3055-3074
- Gutell, R.R.¹ Gray, M.W.² Schnare, M.N.³

4
- 0028071557
- (1994) Nucleic Acids Res. , vol.22 , pp. 3502-3507
- Gutell, R.R.¹

5
- 0032979707
- (1999) Nat. Struct. Biol. , vol.6 , pp. 544-549
- Walter, N.G.¹ Burke, J.M.² Millar, D.P.³

6
- 0033591465
- (1999) J. Mol. Biol. , vol.288 , pp. 911-940
- Mathews, D.H.¹ Sabina, J.² Zuker, M.³ Turner, D.H.⁴

7
- 0033524952
- (1999) J. Mol. Biol. , vol.285 , pp. 2053-2068
- Rivas, E.¹ Eddy, S.R.²

8
- 0029061125
- (1995) J. Mol. Biol. , vol.250 , pp. 37-51
- Gultyaev, A.P.¹ Van Batenburg, F.H.D.² Pleij, C.W.A.³

9
- 34249772381
- (1994) Monatsh. Chem. , vol.125 , pp. 167-168
- Hofacker, I.L.¹ Fontana, W.² Stadler, P.F.³ Bonhoeffer, L.S.⁴ Tacker, M.⁵ Schuster, P.⁶

10
- 0033563515
- (1999) Comput. Chem. , vol.23 , pp. 387-400
- Ding, Y.¹ Lawrence, C.E.²

11
- 0345005029
- (1989) Proc. Natl. Acad. Sci. U.S.A. , vol.86 , pp. 7706-7710
- Jaeger, J.A.¹ Turner, D.H.² Zuker, M.³

12
- 0028000994
- (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 9218-9222
- Walter, A.E.¹ Turner, D.H.² Kim, J.³ Lyttle, M.H.⁴ Müller, P.⁵ Mathews, D.H.⁶ Zuker, M.⁷

13
- 0000616205
- (1984) Bull. Math. Biol. , vol.46 , pp. 591-621
- Zuker, M.¹ Sankoff, D.²

14
- 0024477261
- (1989) Science , vol.244 , pp. 48-52
- Zuker, M.¹

15
- 0035849554
- (2001) Biochemistry , vol.40 , pp. 6971-6981
- Diamond, J.M.¹ Turner, D.H.² Mathews, D.H.³

16
- 0001606582
- (Fasman, G. D., Ed.), CRC Press, Boca Raton, FL
- (1975) Handbook of Biochemistry and Molecular Biology: Nucleic Acids , pp. 589
- Borer, P.N.¹

17
- 0002809449
- (Fasman, G. D., Ed.), CRC Press, Boca Raton, FL
- (1975) Handbook of Biochemistry and Molecular Biology: Nucleic Acids , pp. 197
- Richards, E.G.¹

18
- 0029805937
- (1996) Biochemistry , vol.35 , pp. 14077-14089
- McDowell, J.A.¹ Turner, D.H.²

19
- 0020674698
- (1983) Biochemistry , vol.22 , pp. 256-268
- Petersheim, M.¹ Turner, D.H.²

20
- 0023973247
- (1988) Proc. Natl. Acad. Sci. U.S.A. , vol.85 , pp. 1364-1368
- Tuerk, C.¹ Gauss, P.² Thermes, C.³ Groebe, D.R.⁴ Gayle, M.⁵ Guild, N.⁶ Stormo, G.⁷ D'Auberton-Carafa, Y.⁸ Uhlenbeck, O.C.⁹ Tinoco Jr., I.¹⁰ Brody, E.N.¹¹ Gold, L.¹²

21
- 0026593806
- (1992) Nucleic Acids Res. , vol.20 , pp. 819-824
- Antao, V.P.¹ Tinoco Jr., I.²

22
- 0002084217
- (Gesteland, R. F., Cech, T. R., and Atkins, J. F., Eds.) Cold Spring Harbor Laboratory Press, Plainview, NY
- (1999) The RNA World , pp. 233-264
- Burkard, M.E.¹ Turner, D.H.² Tinoco Jr., I.³

23
- 0029855518
- (1996) Biochemistry , vol.35 , pp. 13753-13761
- Kim, J.¹ Walter, A.E.² Turner, D.H.³

24
- 0000075467
- (1986) Proc. Natl. Acad. Sci. U.S.A. , vol.83 , pp. 9373-9377
- Freier, S.M.¹ Kierzek, R.² Jaeger, J.A.³ Sugimoto, N.⁴ Caruthers, M.H.⁵ Neilson, T.⁶ Turner, D.H.⁷

25
- 0032552882
- (1998) Biochemistry , vol.37 , pp. 14719-14735
- Xia, T.¹ SantaLucia Jr., J.² Burkard, M.E.³ Kierzek, R.⁴ Schroeder, S.J.⁵ Jiao, X.⁶ Cox, C.⁷ Turner, D.H.⁸

26
- 0002635816
- (Bloomfield, V. A., Crothers, D. M., and Tinoco, I., Jr., Eds.), University Science Books, Sausalito, CA
- (2000) Nucleic Acids , pp. 259-334
- Turner, D.H.¹

27
- 0033529318
- (1999) Proc. Natl. Acad. Sci. U.S.A. , vol.96 , pp. 7853-7858
- Chalikian, T.V.¹ Völker, J.² Plum, G.E.³ Breslauer, K.J.⁴

28
- 0033614819
- (1999) Biochemistry , vol.38 , pp. 8409-8422
- Holbrook, J.A.¹ Capp, M.W.² Saecker, R.M.³ Record Jr., M.T.⁴

29
- 0013822628
- (1965) Biopolymers , vol.3 , pp. 491-496
- Ross, P.D.¹ Scruggs, R.L.²

30
- 0014271642
- (1968) Biopolymers , vol.6 , pp. 491-512
- Krakauer, H.¹ Sturtevant, J.M.²

31
- 85088407106
- (1967) J. Phys. Chem. , vol.73 , pp. 2170-2178
- Neumann, E.¹ Ackerman, T.²

32
- 0017569069
- (1977) Biopolymers , vol.16 , pp. 2641-2652
- Suurkuusk, J.¹ Alvarez, J.² Freire, E.³ Biltonen, R.⁴

33
- 0018269338
- (1978) J. Mol. Biol. , vol.122 , pp. 465-470
- Filimonov, V.V.¹ Privalov, P.L.²

34
- 0001027215
- (1963) J. Am. Chem. Soc. , vol.85 , pp. 1915-1918
- Rawitscher, M.A.¹ Ross, P.D.² Sturtevant, J.M.³

35
- 0029877001
- (1996) J. Mol. Biol. , vol.256 , pp. 701-719
- Schnare, M.N.¹ Damberger, S.H.² Gray, M.W.³ Gutell, R.R.⁴

36
- 0028146967
- (1994) Nucleic Acids Res. , vol.22 , pp. 3508-3510
- Damberger, S.H.¹ Gutell, R.R.²

37
- 0024428420
- (1989) Gene , vol.82 , pp. 5-30
- Michel, F.¹ Umesono, K.² Ozeki, H.³

38
- 0031841911
- (1998) Nucleic Acids Res. , vol.26 , pp. 351-352
- Brown, J.W.¹

39
- 0031866668
- (1998) Nucleic Acids Res. , vol.26 , pp. 177-178
- Larsen, N.¹ Samuelsson, T.² Zwieb, C.³

40
- 0034598919
- (2000) Cell , vol.100 , pp. 503-514
- Chen, J.L.¹ Blasco, M.A.² Greider, C.W.³

41
- 0025944831
- (1991) Cell , vol.67 , pp. 343-353
- Romero, D.P.¹ Blackburn, E.H.²

42
- 0033983838
- (2000) Nucleic Acids Res. , vol.28 , pp. 169-170
- Zwieb, C.¹ Wower, J.²

43
- 0025900996
- (1991) Biochemistry , vol.30 , pp. 6428-6436
- Peritz, A.E.¹ Kierzek, R.² Sugimoto, N.³ Turner, D.H.⁴

44
- 0034622514
- (2000) Biochemistry , vol.38 , pp. 9257-9274
- Schroeder, S.J.¹ Turner, D.H.²

45
- 0000731487
- (2001) Biopolymers , vol.52 , pp. 157-167
- Schroeder, S.J.¹ Burkard, M.E.² Turner, D.H.³

46
- 3843114319
- (1950) J. Chem. Phys. , vol.18 , pp. 1600-1606
- Jacobson, H.¹ Stockmayer, W.H.²

47
- 0026032501
- (1991) Nucleic Acids Res. , vol.19 , pp. 759-766
- Leontis, N.B.¹ Kwok, W.² Newman, J.S.³

48
- 0029031144
- (1995) Nucleic Acids Res. , vol.23 , pp. 2212-2222
- Kadrmas, J.L.¹ Ravin, A.J.² Leontis, N.B.³

49
- 0015846852
- (1973) Biopolymers , vol.12 , pp. 1313-1335
- Pörschke, D.¹ Uhlenbeck, O.C.² Martin, F.H.³

50
- 0015810119
- (1973) Biopolymers , vol.12 , pp. 2093-2120
- Appleby, D.W.¹ Kallenbach, N.R.²

51
- 0019883234
- (1981) Biochemistry , vol.20 , pp. 1419-1426
- Freier, S.M.¹ Hill, K.D.² Dewey, T.G.³ Marky, L.A.⁴ Breslauer, K.J.⁵ Turner, L.D.H.⁶

52
- 0034699518
- (2000) Nature , vol.407 , pp. 327-339
- Wimberly, B.T.¹ Brodersen, D.E.² Clemons Jr., W.M.³ Morgan-Warren, R.J.⁴ Carter, A.P.⁵ Vonrhein, C.⁶ Hartsch, T.⁷ Ramakrishnan, V.⁸

53
- 0034637111
- (2000) Science , vol.289 , pp. 905-920
- Ban, N.¹ Nissen, P.² Hansen, J.³ Moore, P.B.⁴ Steitz, T.A.⁵

54
- 0034268836
- (2000) Cell , vol.102 , pp. 615
- Schluenzen, F.¹ Tocilj, A.² Zarivach, R.³ Harms, J.⁴ Gluehmann, M.⁵ Janell, D.⁶ Bashan, A.⁷ Bartels, H.⁸ Agmon, I.⁹ Franceschi, F.¹⁰ Yonath, A.¹¹

55
- 0033553625
- (1999) Science , vol.284 , pp. 1171-1174
- Conn, G.L.¹ Draper, D.E.² Lattman, E.E.³ Gittis, A.G.⁴

56
- 0034615759
- (2000) Science , vol.288 , pp. 107-113
- Agalarov, S.C.¹ Prasad, G.S.² Funke, P.M.³ Stout, C.D.⁴ Williamson, J.R.⁵

57
- 0032374090
- (1998) Biochemistry , vol.37 , pp. 16983-16988
- Hertel, K.J.¹ Stage-Zimmermann, T.K.² Ammons, G.³ Uhlenbeck, O.C.⁴

58
- 0033574151
- (1999) Biochemistry , vol.38 , pp. 3345-3354
- Bassi, G.S.¹ MØllegaard, N.E.² Murchie, A.I.H.³ Lilley, D.M.J.⁴

59
- 0033065715
- (1999) RNA , vol.5 , pp. 180-187
- Thompson, J.B.¹ Lilley, D.M.J.²

60
- 0034545071
- (2000) RNA , vol.6 , pp. 1833-1846
- Zhao, Z.¹ Wilson, T.J.² Maxwell, K.³ Lilley, D.M.J.⁴

61
- 0033555690
- (1999) J. Mol. Biol. , vol.285 , pp. 581-591
- Frazer-Abel, A.A.¹ Hagerman, P.J.²

62
- 0032584152
- (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 3572-3577
- Friederich, M.W.¹ Vacano, E.² Hagerman, P.J.³

63
- 0030590218
- (1996) J. Mol. Biol. , vol.261 , pp. 125-134
- Amiri, K.M.A.¹ Hagerman, P.J.²

64
- 0027982008
- (1994) J. Mol. Biol. , vol.241 , pp. 415-430
- Shen, Z.¹ Hagerman, P.J.²

65
- 0032582795
- (1998) J. Mol. Biol. , vol.283 , pp. 571-583
- Leontis, N.B.¹ Westhof, E.²

66
- 0031014702
- (1997) RNA , vol.3 , pp. 1-16
- Mathews, D.H.¹ Banerjee, A.R.² Luan, D.D.³ Eickbush, T.H.⁴ Turner, D.H.⁵

67
- 0002549050
- (Söll, D. G., Nishimura, S., and Moore, a. P. B., Eds.) Elsevier, New York
- (1999) Prebiotic Chemistry, Molecular Fossils, Nucleosides, and RNA , pp. 21-47
- Xia, T.¹ Mathews, D.H.² Turner, D.H.³

68
- 0033618268
- (1999) J. Mol. Biol. , vol.290 , pp. 967-982
- Burkard, M.E.¹ Kierzek, R.² Turner, D.H.³

69
- 0004161838
- Cambridge University Press, New York
- (1992) Numerical Recipes in C
- Press, W.H.¹ Teukolsky, S.A.² Vetterling, W.T.³ Flannery, B.P.⁴

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.