-
1
-
-
0000956277
-
Morphogenesis of the T4 head
-
Karam,J.D. (ed.), ASM Press, Washington, DC
-
Black,L.W., Showe,M.K. and Steven,A.C. (1994) Morphogenesis of the T4 head. In Karam,J.D. (ed.), Molecular Biology of Bacteriophage T4. ASM Press, Washington, DC, pp. 218-258.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 218-258
-
-
Black, L.W.1
Showe, M.K.2
Steven, A.C.3
-
2
-
-
0018932980
-
DNA packaging by the double-stranded DNA bacteriophages
-
Earnshaw,W.C. and Casjens,S.R. (1980) DNA packaging by the double-stranded DNA bacteriophages. Cell, 21, 319-331.
-
(1980)
Cell
, vol.21
, pp. 319-331
-
-
Earnshaw, W.C.1
Casjens, S.R.2
-
3
-
-
0002067248
-
Terminase and the recognition, cutting, and packaging of lambda chromosomes
-
Feiss,M. (1986) Terminase and the recognition, cutting, and packaging of lambda chromosomes. Trends Genet., 2, 100-104.
-
(1986)
Trends Genet
, vol.2
, pp. 100-104
-
-
Feiss, M.1
-
4
-
-
0024452966
-
DNA packaging in dsDNA bacteriophages
-
Black,L.W. (1989) DNA packaging in dsDNA bacteriophages. Annu. Rev. Microbiol., 43, 267-292.
-
(1989)
Annu. Rev. Microbiol
, vol.43
, pp. 267-292
-
-
Black, L.W.1
-
5
-
-
0029129145
-
Virus DNA packaging: The strategy used by phage lambda
-
Catalano,C.E., Cue,D. and Feiss,M. (1995) Virus DNA packaging: the strategy used by phage lambda. Mol. Microbiol., 16, 1075-1086.
-
(1995)
Mol. Microbiol
, vol.16
, pp. 1075-1086
-
-
Catalano, C.E.1
Cue, D.2
Feiss, M.3
-
6
-
-
0023933829
-
Cloning, overexpression and purification of the terminase proteins gp16 and gp17 of bacteriophage T4. Construction of a defined in-vitro DNA packaging system using purified terminase proteins
-
Rao,V.B. and Black,L.W. (1988) Cloning, overexpression and purification of the terminase proteins gp16 and gp17 of bacteriophage T4. Construction of a defined in-vitro DNA packaging system using purified terminase proteins. J. Mol. Biol., 200, 475-488.
-
(1988)
J. Mol. Biol
, vol.200
, pp. 475-488
-
-
Rao, V.B.1
Black, L.W.2
-
7
-
-
0025292260
-
Bacteriophage T4 DNA packaging genes 16 and 17
-
Powell,D., Franklin,J., Arisaka,F. and Mosig,G. (1990) Bacteriophage T4 DNA packaging genes 16 and 17. Nucleic Acids Res., 18, 4005
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 4005
-
-
Powell, D.1
Franklin, J.2
Arisaka, F.3
Mosig, G.4
-
8
-
-
0027217224
-
A novel terminase activity associated with the DNA packaging protein gp17 of bacteriophage T4
-
Bhattacharyya,S.P. and Rao,V.B. (1993) A novel terminase activity associated with the DNA packaging protein gp17 of bacteriophage T4. Virology, 196, 34-44.
-
(1993)
Virology
, vol.196
, pp. 34-44
-
-
Bhattacharyya, S.P.1
Rao, V.B.2
-
9
-
-
0034711268
-
Biochemical characterization of an ATPase activity associated with the large packaging subunit gp17 from bacteriophage T4
-
Leffers,G. and Rao,V.B. (2000) Biochemical characterization of an ATPase activity associated with the large packaging subunit gp17 from bacteriophage T4. J. Biol. Chem., 275, 37127-37136.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 37127-37136
-
-
Leffers, G.1
Rao, V.B.2
-
10
-
-
0027299633
-
DNA packaging ATPase of bacteriophage T3
-
Morita,M., Tasaka,M. and Fujisawa,H. (1993) DNA packaging ATPase of bacteriophage T3. Virology, 193, 748-752.
-
(1993)
Virology
, vol.193
, pp. 748-752
-
-
Morita, M.1
Tasaka, M.2
Fujisawa, H.3
-
11
-
-
0023660929
-
Initiation events in in-vitro packaging of bacteriophage phi 29 DNA-gp3
-
Guo,P., Peterson,C. and Anderson,D. (1987) Initiation events in in-vitro packaging of bacteriophage phi 29 DNA-gp3. J. Mol. Biol., 197, 219-228.
-
(1987)
J. Mol. Biol
, vol.197
, pp. 219-228
-
-
Guo, P.1
Peterson, C.2
Anderson, D.3
-
12
-
-
0035909370
-
The bacteriophage straight phi29 portal motor can package DNA against a large internal force
-
Smith,D.E., Tans,S.J., Smith,S.B., Grimes,S., Anderson,D.L. and Bustamante,C. (2001) The bacteriophage straight phi29 portal motor can package DNA against a large internal force. Nature, 413, 748-752.
-
(2001)
Nature
, vol.413
, pp. 748-752
-
-
Smith, D.E.1
Tans, S.J.2
Smith, S.B.3
Grimes, S.4
Anderson, D.L.5
Bustamante, C.6
-
13
-
-
0029556888
-
DNA packaging and cutting by phage terminases: Control in phage T4 by a synaptic mechanism
-
Black,L.W. (1995) DNA packaging and cutting by phage terminases: control in phage T4 by a synaptic mechanism. Bioessays, 17, 1025-1030.
-
(1995)
Bioessays
, vol.17
, pp. 1025-1030
-
-
Black, L.W.1
-
14
-
-
0035976782
-
The N-terminal ATPase site in the large terminase protein gp17 is critically required for DNA packaging in bacteriophage T4
-
Rao,V.B. and Mitchell,M.S. (2001) The N-terminal ATPase site in the large terminase protein gp17 is critically required for DNA packaging in bacteriophage T4. J. Mol. Biol., 314, 401-411.
-
(2001)
J. Mol. Biol
, vol.314
, pp. 401-411
-
-
Rao, V.B.1
Mitchell, M.S.2
-
15
-
-
0036300304
-
The large subunit of bacteriophage lambda's terminase plays a role in DNA translocation and packaging termination
-
Duffy,C. and Feiss,M. (2002) The large subunit of bacteriophage lambda's terminase plays a role in DNA translocation and packaging termination. J. Mol. Biol., 316, 547-561.
-
(2002)
J. Mol. Biol
, vol.316
, pp. 547-561
-
-
Duffy, C.1
Feiss, M.2
-
16
-
-
0027983134
-
Analysis of functional domains of the packaging proteins of bacteriophage T3 by site-directed mutagenesis
-
Morita,M., Tasaka,M. and Fujisawa,H. (1994) Analysis of functional domains of the packaging proteins of bacteriophage T3 by site-directed mutagenesis. J. Mol. Biol., 235, 248-259.
-
(1994)
J. Mol. Biol
, vol.235
, pp. 248-259
-
-
Morita, M.1
Tasaka, M.2
Fujisawa, H.3
-
17
-
-
0023660940
-
Prohead and DNA-gp3-dependent ATPase activity of the DNA-packaging protein gp16 of bacteriophage phi 29
-
Guo,P., Peterson,C. and Anderson,D. (1987) Prohead and DNA-gp3-dependent ATPase activity of the DNA-packaging protein gp16 of bacteriophage phi 29. J. Mol. Biol., 197, 229-236.
-
(1987)
J. Mol. Biol
, vol.197
, pp. 229-236
-
-
Guo, P.1
Peterson, C.2
Anderson, D.3
-
18
-
-
0026570966
-
Channel catfish virus: A new type of herpesvirus
-
Davison,A.J. (1992) Channel catfish virus: a new type of herpesvirus. Virology, 186, 9-14.
-
(1992)
Virology
, vol.186
, pp. 9-14
-
-
Davison, A.J.1
-
19
-
-
0027182114
-
Helicases: Amino acid sequence comparisons and structure-function relationships
-
Gorbalenya,A.E. and Koonin,E.V. (1993) Helicases: amino acid sequence comparisons and structure-function relationships. Curr. Opin. Struct. Biol., 3, 419-429.
-
(1993)
Curr. Opin. Struct. Biol
, vol.3
, pp. 419-429
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
-
20
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul,S.F., Madden,T.L., Schäffer,A.A., Zhang,J., Zhang,Z., Miller,W. and Lipman,D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
21
-
-
0032964297
-
BLAST 2 sequences-a new tool for comparing protein and nucleotide sequences
-
Tatusova,T.T. and Madden,T.L. (1999) BLAST 2 sequences-a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett., 174, 247-250.
-
(1999)
FEMS Microbiol. Lett
, vol.174
, pp. 247-250
-
-
Tatusova, T.T.1
Madden, T.L.2
-
22
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
23
-
-
0034663597
-
Application of multiple sequence alignment profiles to improve protein secondary structure prediction
-
Cuff J.A. and Barton,G.J. (2000) Application of multiple sequence alignment profiles to improve protein secondary structure prediction. Proteins, 40, 502-511.
-
(2000)
Proteins
, vol.40
, pp. 502-511
-
-
Cuff, J.A.1
Barton, G.J.2
-
24
-
-
0025331936
-
Construction of Escherichia coli amber suppressor tRNA genes. II. Synthesis of additional tRNA genes and improvement of suppressor efficiency
-
Kleina,L.G., Masson,J.M., Normanly,J., Abelson J. and Miller,J.H. (1990) Construction of Escherichia coli amber suppressor tRNA genes. II. Synthesis of additional tRNA genes and improvement of suppressor efficiency. J. Mol. Biol., 213, 705-717.
-
(1990)
J. Mol. Biol
, vol.213
, pp. 705-717
-
-
Kleina, L.G.1
Masson, J.M.2
Normanly, J.3
Abelson, J.4
Miller, J.H.5
-
25
-
-
0032483313
-
Functional analysis of the DNA-packaging/terminase protein gp17 from bacteriophage T4
-
Kuebler,D. and Rao,V.B. (1998) Functional analysis of the DNA-packaging/terminase protein gp17 from bacteriophage T4. J. Mol. Biol., 281, 803-814.
-
(1998)
J. Mol. Biol
, vol.281
, pp. 803-814
-
-
Kuebler, D.1
Rao, V.B.2
-
26
-
-
0035180718
-
Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages
-
Tétart,F., Desplats,C., Kutateladze,M., Monod,C., Ackermann,H.W. and Krisch,H.M. (2001) Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages. J. Bacteriol., 183, 358-366.
-
(2001)
J. Bacteriol
, vol.183
, pp. 358-366
-
-
Tétart, F.1
Desplats, C.2
Kutateladze, M.3
Monod, C.4
Ackermann, H.W.5
Krisch, H.M.6
-
27
-
-
0031588902
-
The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4
-
Monod,C., Repoila,F., Kutateladze,M., Tétart,F. and Krisch,H.M. (1997) The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4. J. Mol. Biol., 267, 237-249.
-
(1997)
J. Mol. Biol
, vol.267
, pp. 237-249
-
-
Monod, C.1
Repoila, F.2
Kutateladze, M.3
Tétart, F.4
Krisch, H.M.5
-
28
-
-
0026585978
-
A broad-host-range vibriophage, KVP40, isolated from sea water
-
Matsuzaki,S., Tanaka,S., Koga,T. and Kawata,T. (1992) A broad-host-range vibriophage, KVP40, isolated from sea water. Microbiol. Immunol., 36, 93-97.
-
(1992)
Microbiol. Immunol
, vol.36
, pp. 93-97
-
-
Matsuzaki, S.1
Tanaka, S.2
Koga, T.3
Kawata, T.4
-
29
-
-
0032487733
-
Cloning and sequencing of major capsid protein (mcp) gene of a vibriophage, KVP20, possibly related to T-even coliphages
-
Matsuzaki,S., Inoue,T., Kuroda,M., Kimura,S. and Tanaka,S. (1998) Cloning and sequencing of major capsid protein (mcp) gene of a vibriophage, KVP20, possibly related to T-even coliphages. Gene, 222, 25-30.
-
(1998)
Gene
, vol.222
, pp. 25-30
-
-
Matsuzaki, S.1
Inoue, T.2
Kuroda, M.3
Kimura, S.4
Tanaka, S.5
-
30
-
-
0032741021
-
Vibriophage KVP40 and coliphage T4 genomes share a homologous 7-kbp region immediately upstream of the gene encoding the major capsid protein
-
Matsuzaki,S., Kuroda,M., Kimura,S. and Tanaka,S. (1999) Vibriophage KVP40 and coliphage T4 genomes share a homologous 7-kbp region immediately upstream of the gene encoding the major capsid protein. Arch. Virol., 144, 2007-2012.
-
(1999)
Arch. Virol
, vol.144
, pp. 2007-2012
-
-
Matsuzaki, S.1
Kuroda, M.2
Kimura, S.3
Tanaka, S.4
-
31
-
-
0028239563
-
Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences
-
Ruimy,R., Breittmayer,V., Elbaze,P., Lafay,B., Boussemart,O., Gauthier,M. and Christen,R. (1994) Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences. Int. J. Syst. Bacteriol., 44, 416-426.
-
(1994)
Int. J. Syst. Bacteriol
, vol.44
, pp. 416-426
-
-
Ruimy, R.1
Breittmayer, V.2
Elbaze, P.3
Lafay, B.4
Boussemart, O.5
Gauthier, M.6
Christen, R.7
-
32
-
-
0027374807
-
HF1 and HF2: Novel bacteriophages of halophilic Archaea
-
Nuttall,S.D. and Dyall-Smith,M.L. (1993) HF1 and HF2: novel bacteriophages of halophilic Archaea. Virology, 197, 678-684.
-
(1993)
Virology
, vol.197
, pp. 678-684
-
-
Nuttall, S.D.1
Dyall-Smith, M.L.2
-
33
-
-
0028932073
-
Halophage HF2: Genome organization and replication strategy
-
Nuttall,S.D. and Dyall-Smith,M.L. (1995) Halophage HF2: genome organization and replication strategy. J. Virol., 69, 2322-2327.
-
(1995)
J. Virol
, vol.69
, pp. 2322-2327
-
-
Nuttall, S.D.1
Dyall-Smith, M.L.2
-
34
-
-
0033056680
-
Sequence of the Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product
-
Plunkett,G.,III, Rose,D.J., Durfee,T.J. and Blattner,F.R. (1999) Sequence of the Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product. J. Bacteriol., 181, 1767-1778.
-
(1999)
J. Bacteriol
, vol.181
, pp. 1767-1778
-
-
Plunkett G. III1
Rose, D.J.2
Durfee, T.J.3
Blattner, F.R.4
-
35
-
-
0035853056
-
Herpes simplex virus DNA packaging sequences adopt novel structures that are specifically recognized by a component of the cleavage and packaging machinery
-
Adelman,K., Salmon,B. and Baines,J.D. (2001) Herpes simplex virus DNA packaging sequences adopt novel structures that are specifically recognized by a component of the cleavage and packaging machinery. Proc. Natl Acad. Sci. USA, 98, 3086-3091.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 3086-3091
-
-
Adelman, K.1
Salmon, B.2
Baines, J.D.3
-
36
-
-
0031937428
-
The genome of salmonid herpesvirus 1
-
Davison,A.J. (1998) The genome of salmonid herpesvirus 1. J. Virol., 72, 1974-1982.
-
(1998)
J. Virol
, vol.72
, pp. 1974-1982
-
-
Davison, A.J.1
-
37
-
-
0035852638
-
Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii
-
Story,R.M., Li,H. and Abelson,J.N. (2001) Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii. Proc. Natl Acad. Sci. USA, 98, 1465-1470.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 1465-1470
-
-
Story, R.M.1
Li, H.2
Abelson, J.N.3
-
38
-
-
0034708444
-
Comparative genomics of the eukaryotes
-
Rubin,G.M., Yandell,M.D., Wortman,J.R., Miklos,G.L.G., Nelson,C.R., Hariharan,I.K., Fortini,M.E., Li,P.I., Apweiler,R., Fleischmann,W. et al. (2000) Comparative genomics of the eukaryotes. Science, 287, 2204-2215.
-
(2000)
Science
, vol.287
, pp. 2204-2215
-
-
Rubin, G.M.1
Yandell, M.D.2
Wortman, J.R.3
Miklos, G.L.G.4
Nelson, C.R.5
Hariharan, I.K.6
Fortini, M.E.7
Li, P.I.8
Apweiler, R.9
Fleischmann, W.10
-
39
-
-
0031023655
-
Purification and characterization of the small subunit of phage T4 terminase, gp16, required for DNA packaging
-
Lin,H., Simon,M.N. and Black,L.W. (1997) Purification and characterization of the small subunit of phage T4 terminase, gp16, required for DNA packaging. J. Biol. Chem., 272, 3495-3501.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 3495-3501
-
-
Lin, H.1
Simon, M.N.2
Black, L.W.3
-
40
-
-
0033607307
-
Domain structure of gpNu1, a phage lambda DNA packaging protein
-
Yang,Q., Berton,N., Manning,M.C. and Catalano,C.E. (1999) Domain structure of gpNu1, a phage lambda DNA packaging protein. Biochemistry, 38, 14238-14247.
-
(1999)
Biochemistry
, vol.38
, pp. 14238-14247
-
-
Yang, Q.1
Berton, N.2
Manning, M.C.3
Catalano, C.E.4
-
41
-
-
0023042681
-
Lambda phage protein Nu 1 contains the conserved DNA binding fold of repressors
-
Kypr,J. and Mrazek,J. (1986) Lambda phage protein Nu 1 contains the conserved DNA binding fold of repressors. J. Mol. Biol., 191, 139-140.
-
(1986)
J. Mol. Biol
, vol.191
, pp. 139-140
-
-
Kypr, J.1
Mrazek, J.2
-
42
-
-
0026517262
-
Molecular analysis of the Bacillus subtilis bacteriophage SPP1 region encompassing genes 1 to 6. The products of gene 1 and gene 2 are required for pac cleavage
-
Chai,S., Bravo,A., Luder,G., Nedlin,A., Trautner,T.A. and Alonso,J.C. (1992) Molecular analysis of the Bacillus subtilis bacteriophage SPP1 region encompassing genes 1 to 6. The products of gene 1 and gene 2 are required for pac cleavage. J. Mol. Biol., 224, 87-102.
-
(1992)
J. Mol. Biol
, vol.224
, pp. 87-102
-
-
Chai, S.1
Bravo, A.2
Luder, G.3
Nedlin, A.4
Trautner, T.A.5
Alonso, J.C.6
-
44
-
-
0030595337
-
Structural classification of HTH DNA-binding domains and protein-DNA interaction modes
-
Wintjens,R. and Rooman,M. (1996) Structural classification of HTH DNA-binding domains and protein-DNA interaction modes. J. Mol. Biol., 262, 294-313.
-
(1996)
J. Mol. Biol
, vol.262
, pp. 294-313
-
-
Wintjens, R.1
Rooman, M.2
-
45
-
-
0030600476
-
Expression of the bacteriophage T4 DNA terminase genes 16 and 17 yields multiple proteins
-
Franklin,J. and Mosig,G. (1996) Expression of the bacteriophage T4 DNA terminase genes 16 and 17 yields multiple proteins. Gene, 177, 179-189.
-
(1996)
Gene
, vol.177
, pp. 179-189
-
-
Franklin, J.1
Mosig, G.2
-
46
-
-
0024278077
-
Prediction of an ATP reactive center in the small subunit, gpNu1, of the phage lambda terminase enzyme
-
Becker,A. and Gold,M. (1988) Prediction of an ATP reactive center in the small subunit, gpNu1, of the phage lambda terminase enzyme. J. Mol. Biol., 199, 219-222.
-
(1988)
J. Mol. Biol
, vol.199
, pp. 219-222
-
-
Becker, A.1
Gold, M.2
-
47
-
-
0027968217
-
Analysis of the Bacillus subtilis bacteriophages SPP1 and SF6 gene product 1: A protein involved in the initiation of headful DNA packaging
-
Chai,S., Kruft,V. and Alonso,J.C. (1994) Analysis of the Bacillus subtilis bacteriophages SPP1 and SF6 gene product 1: a protein involved in the initiation of headful DNA packaging. Virology, 202, 930-939.
-
(1994)
Virology
, vol.202
, pp. 930-939
-
-
Chai, S.1
Kruft, V.2
Alonso, J.C.3
-
48
-
-
0016345760
-
Chemical and biological evolution of nucleotide-binding protein
-
Rossmann,M.G., Moras,D. and Olsen,K.W. (1974) Chemical and biological evolution of nucleotide-binding protein. Nature, 250, 194-199.
-
(1974)
Nature
, vol.250
, pp. 194-199
-
-
Rossmann M.G. Moras, D.1
Olsen, K.W.2
-
49
-
-
0034602364
-
Three-dimensional view of the surface motif associated with the P-loop structure: Cis and trans cases of convergent evolution
-
Via,A., Ferrè,F., Brannetti,B., Valencia,A. and Helmer-Citterich,M. (2000) Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution. J. Mol. Biol., 303, 455-465.
-
(2000)
J. Mol. Biol
, vol.303
, pp. 455-465
-
-
Via, A.1
Ferrè, F.2
Brannetti, B.3
Valencia, A.4
Helmer-Citterich, M.5
-
50
-
-
0001607723
-
Distantly related sequences in the α- and β-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold
-
Walker,J., Saraste,M., Runswick,M. and Gay,N. (1982) Distantly related sequences in the α- and β-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J., 1, 945-951.
-
(1982)
EMBO J
, vol.1
, pp. 945-951
-
-
Walker, J.1
Saraste, M.2
Runswick, M.3
Gay, N.4
-
51
-
-
0010456859
-
Crystal structure of the ATPase domain of translation initiation factor 4A from Saccharomyces cerevisiae-the prototype of the DEAD box protein family
-
Benz,J., Trachsel,H. and Baumann,U. (1999) Crystal structure of the ATPase domain of translation initiation factor 4A from Saccharomyces cerevisiae-the prototype of the DEAD box protein family. Structure, 6, 89-100.
-
(1999)
Structure
, vol.6
, pp. 89-100
-
-
Benz, J.1
Trachsel, H.2
Baumann, U.3
-
52
-
-
0034730389
-
ATPase center of bacteriophage lambda terminase involved in post-cleavage stages of DNA packaging: Identification of ATP-interactive amino acids
-
Hang,J.Q., Tack,B.F. and Feiss,M. (2000) ATPase center of bacteriophage lambda terminase involved in post-cleavage stages of DNA packaging: identification of ATP-interactive amino acids. J. Mol. Biol., 302, 777-795.
-
(2000)
J. Mol. Biol
, vol.302
, pp. 777-795
-
-
Hang, J.Q.1
Tack, B.F.2
Feiss, M.3
-
53
-
-
0025897229
-
Site-specific mutagenesis of conserved residues within Walker A and B sequences of Escherichia coli UvrA protein
-
Myles,G.M., Hearst,J.E. and Sancar,A. (1991) Site-specific mutagenesis of conserved residues within Walker A and B sequences of Escherichia coli UvrA protein. Biochemistry, 30, 3824-3834.
-
(1991)
Biochemistry
, vol.30
, pp. 3824-3834
-
-
Myles, G.M.1
Hearst, J.E.2
Sancar, A.3
-
54
-
-
0028796334
-
A common topology of proteins catalyzing ATP-triggered reactions
-
Yoshida,M. and Amano,T. (1995) A common topology of proteins catalyzing ATP-triggered reactions. FEBS Lett., 359, 1-5.
-
(1995)
FEBS Lett
, vol.359
, pp. 1-5
-
-
Yoshida, M.1
Amano, T.2
-
55
-
-
0025310575
-
Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 Å resolution: Implications for the mechanism of GTP hydrolysis
-
Pai,E.F., Krengel,U., Petsko,G.A., Goody,R.S., Kabsch,W. and Wittinghofer,A. (1990) Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 Å resolution: implications for the mechanism of GTP hydrolysis. EMBO J., 9, 2351-2359.
-
(1990)
EMBO J
, vol.9
, pp. 2351-2359
-
-
Pai, E.F.1
Krengel, U.2
Petsko, G.A.3
Goody, R.S.4
Kabsch, W.5
Wittinghofer, A.6
-
56
-
-
0026584599
-
Structure of the recA protein-ADP complex
-
Story,R.M. and Steitz,T.A. (1992) Structure of the recA protein-ADP complex. Nature., 355, 318-325.
-
(1992)
Nature
, vol.355
, pp. 318-325
-
-
Story, R.M.1
Steitz, T.A.2
-
57
-
-
0029856618
-
Crystal structure of a DExx box DNA helicase
-
Subramanya,H.S., Bird,L.E., Brannigan,J.A. and Wigley,D.B. (1996) Crystal structure of a DExx box DNA helicase. Nature, 384, 379-383.
-
(1996)
Nature
, vol.384
, pp. 379-383
-
-
Subramanya, H.S.1
Bird, L.E.2
Brannigan, J.A.3
Wigley, D.B.4
-
58
-
-
0026680746
-
Mutational analysis of a DEAD box RNA helicase: The mammalian translation initiation factor eIF-4A
-
Pause,A. and Sonenberg,M. (1992) Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A. EMBO J., 11, 2643-2654.
-
(1992)
EMBO J
, vol.11
, pp. 2643-2654
-
-
Pause, A.1
Sonenberg, M.2
-
59
-
-
0032539978
-
Crystal structure of yeast thymidylate kinase complexed with the bisubstrate inhibitor P1-(5′-adenosyl) P5-(5′-thymidyl) pentaphosphate (TP5A) at 2.0 Å resolution: Implications for catalysis and AZT activation
-
Lavie,A., Konrad,M., Brundiers,R., Goody,R.S., Schlichting,I. and Reinstein,J. (1998) Crystal structure of yeast thymidylate kinase complexed with the bisubstrate inhibitor P1-(5′-adenosyl) P5-(5′-thymidyl) pentaphosphate (TP5A) at 2.0 Å resolution: implications for catalysis and AZT activation. Biochemistry, 37, 3677-3686.
-
(1998)
Biochemistry
, vol.37
, pp. 3677-3686
-
-
Lavie, A.1
Konrad, M.2
Brundiers, R.3
Goody, R.S.4
Schlichting, I.5
Reinstein, J.6
-
60
-
-
0032478529
-
The largest (70 kDa) product of the bacteriophage T4 DNA terminase gene 17 binds to single stranded DNA segments and digests them towards junctions with double-stranded DNA
-
Franklin,J., Haseltine,D., Davenport,L. and Mosig,G. (1998) The largest (70 kDa) product of the bacteriophage T4 DNA terminase gene 17 binds to single stranded DNA segments and digests them towards junctions with double-stranded DNA. J. Mol. Biol., 277, 541-557.
-
(1998)
J. Mol. Biol
, vol.277
, pp. 541-557
-
-
Franklin, J.1
Haseltine, D.2
Davenport, L.3
Mosig, G.4
-
61
-
-
0028960132
-
Structural and functional domains of the large subunit of the bacteriophage T3 DNA packaging enzyme: Importance of the C-terminal region in prohead binding
-
Morita,M., Tasaka,M. and Fujisawa,H. (1995) Structural and functional domains of the large subunit of the bacteriophage T3 DNA packaging enzyme: importance of the C-terminal region in prohead binding. J. Mol. Biol., 245, 635-644.
-
(1995)
J. Mol. Biol
, vol.245
, pp. 635-644
-
-
Morita, M.1
Tasaka, M.2
Fujisawa, H.3
-
62
-
-
0028870215
-
Specific interaction of terminase, the DNA packaging enzyme of bacteriophage λ, with the portal protein of the prohead
-
Yeo,A. and Feiss,M. (1995) Specific interaction of terminase, the DNA packaging enzyme of bacteriophage λ, with the portal protein of the prohead. J. Mol. Biol., 245, 141-150.
-
(1995)
J. Mol. Biol
, vol.245
, pp. 141-150
-
-
Yeo, A.1
Feiss, M.2
-
63
-
-
0033523081
-
Analysis of a capsid portal protein and terminase functional domains: Interaction sites required for DNA packaging in bacteriophage T4
-
Lin,H., Rao,V.B. and Black,L.W. (1999) Analysis of a capsid portal protein and terminase functional domains: interaction sites required for DNA packaging in bacteriophage T4. J. Mol. Biol., 289, 249-260.
-
(1999)
J. Mol. Biol
, vol.289
, pp. 249-260
-
-
Lin, H.1
Rao, V.B.2
Black, L.W.3
-
64
-
-
0025996094
-
Evidence for an ancestral core structure in nucleotide-binding proteins with the type A motif
-
Milner-White,E.J., Coggins,J.R. and Anton,I.A. (1991) Evidence for an ancestral core structure in nucleotide-binding proteins with the type A motif. J. Mol. Biol., 221, 751-754.
-
(1991)
J. Mol. Biol
, vol.221
, pp. 751-754
-
-
Milner-White, E.J.1
Coggins, J.R.2
Anton, I.A.3
-
65
-
-
0029914905
-
Active site comparisons highlight structural similarities between myosin and other P-loop proteins
-
Smith,C.A. and Rayment,I. (1996) Active site comparisons highlight structural similarities between myosin and other P-loop proteins. Biophys. J., 70, 1590-1602.
-
(1996)
Biophys. J
, vol.70
, pp. 1590-1602
-
-
Smith, C.A.1
Rayment, I.2
-
66
-
-
0030871678
-
Capsid assembly and DNA packaging in herpes simplex virus
-
Homa,F.L. and Brown,J.C. (1997) Capsid assembly and DNA packaging in herpes simplex virus. Rev. Med. Virol., 7, 107-122.
-
(1997)
Rev. Med. Virol
, vol.7
, pp. 107-122
-
-
Homa, F.L.1
Brown, J.C.2
-
67
-
-
0032579608
-
Genetic analysis of the UL 15 gene locus for the putative terminase of herpes simplex virus type 1
-
Yu,D. and Weller,S.K. (1998) Genetic analysis of the UL 15 gene locus for the putative terminase of herpes simplex virus type 1. Virology, 243, 32-44.
-
(1998)
Virology
, vol.243
, pp. 32-44
-
-
Yu, D.1
Weller, S.K.2
-
68
-
-
0032518490
-
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: The crystal structure provides insights into the mode of unwinding
-
Kim,J.L., Morgenstern,K.A., Griffith,J.P., Dwyer,M.D., Thomson,J.A., Murcko,M.A., Lin,C. and Caron,P.R. (1998) Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding. Structure, 6, 89-100.
-
(1998)
Structure
, vol.6
, pp. 89-100
-
-
Kim, J.L.1
Morgenstern, K.A.2
Griffith, J.P.3
Dwyer, M.D.4
Thomson, J.A.5
Murcko, M.A.6
Lin, C.7
Caron, P.R.8
-
69
-
-
0025898593
-
Translation initiation factor 4A from Saccharomyces cerevisiae: Analysis of residues conserved in the D-E-A-D family of RNA helicases
-
Schmid,S.R. and Linder,P. (1991) Translation initiation factor 4A from Saccharomyces cerevisiae: analysis of residues conserved in the D-E-A-D family of RNA helicases. Mol. Cell Biol., 11, 3463-3471.
-
(1991)
Mol. Cell Biol
, vol.11
, pp. 3463-3471
-
-
Schmid, S.R.1
Linder, P.2
-
70
-
-
0034619668
-
Structure of the phi29 DNA packaging motor
-
Simpson,A.A., Tao,Y., Leiman,P.G., Badasso,M.O., He,Y., Jardine,P.J., Olson,N.H., Morais,M.C., Grimes,S., Anderson,D.L., Baker,T.S. and Rossmann,M.G. (2000) Structure of the phi29 DNA packaging motor. Nature, 408, 745-750.
-
(2000)
Nature
, vol.408
, pp. 745-750
-
-
Simpson, A.A.1
Tao, Y.2
Leiman, P.G.3
Badasso, M.O.4
He, Y.5
Jardine, P.J.6
Olson, N.H.7
Morais, M.C.8
Grimes, S.9
Anderson, D.L.10
Baker, T.S.11
Rossmann, M.G.12
|