Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT

EMBO Journal

Volumn 21, Issue 8, 2002, Pages 1987-1997

  Yang, Yinshan ^a   Declerck, Nathalie ^a   Manival, Xavier ^a   Aymerich, Stéphane ^b   Kochoyan, Michel ^c  

^a DIVISION OF REPRODUCTIVE BIOLOGY   (United States)

^b UNIVERSITY OF LONDON   (United Kingdom)

^c INSERM   (France)

Author keywords

Antitermination complex; NMR; RNA binding; Structure; Transcriptional antiterminator

Indexed keywords

BACTERIAL PROTEIN; DIMER; DNA; MESSENGER RNA; PROTEIN LICT; REGULATOR PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; CO ANTITERMINATOR; COMPLEX FORMATION; CONFORMATIONAL TRANSITION; GENETIC CONSERVATION; HYDROPHOBICITY; MOLECULAR RECOGNITION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN INTERACTION; PROTEIN RNA BINDING; PROTEIN STRUCTURE; RIBONUCLEIC ANTITERMINATOR; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TRANSCRIPTION REGULATION;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RNA; SEQUENCE HOMOLOGY, AMINO ACID; SOLUTIONS; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); FELIS CATUS;

EID: 0037090685     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/21.8.1987     Document Type: Article

References (52)

1. Structure of the S15, S6, S18-rRNA complex: Assembly of the 30S ribosome central domain
2. Structure of the PI helix from group I self-splicing introns
3. Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin
4. Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA
5. In vitro reconstitution of transcriptional antitermination by the SacT and SacY proteins of Bacillus subtilis
6. Cloning and preliminary characterization of the sacS locus from Bacillus subtilis which controls the regulation of the exoenzyme levansucrase
7. Specificity determinants and structural features in the RNA target of the bacterial antiterminator proteins of the BglG/SacY family
8. Preparation of isotopically labeled ribonucleotides for multidimensional NMR spectroscopy of RNA
9. Crystal structure of the ribonucleoprotein core of the signal recognition particle
10. The structural basis for terminator recognition by the Rho transcription termination factor
11. Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin
12. Crystal structure of an initiation factor bound to the 30S ribosomal subunit
13. Crystal structure of a conserved ribosomal protein-RNA complex
14. RNA-protein complexes
15. RNA recognition by transcriptional antiterminators of the BglG/SacY family: Functional and structural comparison of the CAT domain from SacY and LicT
16. Themes in RNA-protein recognition
17. The mechanism of intrinsic transcription termination
18. RNA bulges as architectural and recognition motifs
19. Transcriptional antitermination in the bgl operon of E. coli is modulated by a specific RNA binding protein
20. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
21. Regulation of the putative bglPH operon for aryl-β-glucoside utilization in Bacillus subtilis
22. Specific interaction of the RNA-binding domain of the Bacillus subtilis transcriptional antiterminator GlcT with its RNA target, RAT
23. Conserved geometrical base-pairing patterns in RNA
24. Current topics in RNA-protein recognition: Control of specificity and biological function through induced fit and conformational capture
25. A bacterial gene involved in transcription antitermination: Regulation at a rho-independent terminator in the bgl operon of E. coli
26. From genetic to structural characterization of a new class of RNA-binding domain within the SacY/BglG family of antiterminator proteins
27. Synthesis of small RNAs using T7 RNA polymerase
28. Improved RNA structure determination by detection of NOE contacts to exchange broadened amino-protons
29. Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
30. 15N labelled RNAs for heteronuclear multi-dimensional NMR studies
31. Crystal structure of the S15-rRNA complex
32. Automated NOESY interpretation with ambiguous distance restraints: The refined NMR solution structure of the pleckstrin homology domain from β-spectrin
33. Multidimensional heteronuclear NMR experiments for structure determination of isotopically labeled RNA
34. 13C-labeled RNAs
35. Asymmetric contributions to RNA binding by the Thr(45) residues of the MS2 coat protein dimer
36. Recent advances in RNA-protein recognition
37. Exchangeable proton NMR without base-line distortion, using new strong-pulse sequence
38. Gifa V4: A complete package for NMR data-set processing
39. RNA recognition by a Staufen double-stranded RNA-binding domain
40. LicT, a Bacillus subtilis transcriptional antiterminator protein of the BgIG family
41. The NMR structure of the 5S rRNA E-domain-protein L25 complex shows preformed and induced recognition
42. Crystal structure of an RNA bacteriophage coat protein-operator complex
43. Structural insights into the regulation of bacterial signalling proteins containing PRDs
44. Crystal structure of a new RNA-binding domain from the antiterminator protein SacY of Bacillus subtilis
45. RNA folding: Beyond Watson-Crick pairs
46. A detailed view of a ribosomal active site: The structure of the L11-RNA complex
47. An extended RNA binding surface through arrayed S1 and KH domains in transcription factor NusA
48. Mechanism of intrinsic transcription termination and antitermination