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1
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0033210727
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DNA sequencing based on single molecule detection
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Ishikawa, M.: DNA Sequencing Based on Single Molecule Detection, Tanpakushitsu Kakusan Koso 44 (1999), 2019-2023.
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Tanpakushitsu Kakusan Koso
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Ishikawa, M.1
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2
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0030180521
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Single-molecule fluorescence analysis in solution
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Keller, R., Ambrose, W.P., Goodwin, P.M., Jett, J.H., Martin, J.C. and Wu, M.: Single-Molecule Fluorescence Analysis in Solution, Appl. Spectros. 50 (1996), 12A-32A.
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Appl. Spectros.
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Keller, R.1
Ambrose, W.P.2
Goodwin, P.M.3
Jett, J.H.4
Martin, J.C.5
Wu, M.6
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3
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0034111022
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Investigation of hydrolysis of single DNA molecules using fluorescence video microscopy
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Tachi-iri, Y., Ishikawa, M. and Hirano, K.-I.: Investigation of Hydrolysis of Single DNA Molecules Using Fluorescence Video Microscopy, Anal. Chem. 72 (2000), 1649-1656.
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Anal. Chem.
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Tachi-iri, Y.1
Ishikawa, M.2
Hirano, K.-I.3
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4
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0035870178
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On-demand droplet spotter for preparing pico- to femtoliter droplets on surfaces
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Yogi, O., Kawakami, T., Yamauchi, M., Ye, J.Y. and Ishikawa, M.: On-Demand Droplet Spotter for Preparing Pico- to Femtoliter Droplets on Surfaces, Anal. Chem. 73 (2001), 1896-1902.
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Anal. Chem.
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Yogi, O.1
Kawakami, T.2
Yamauchi, M.3
Ye, J.Y.4
Ishikawa, M.5
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5
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2842588851
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Surface-enhanced adsorption raman of dyes on silver and gold sols
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Lee, P.C. and Meisel, D.: Adsorption and Surface-Enhanced Raman of Dyes on Silver and Gold Sols, J. Phys. Chem. 86 (1982), 3391-3395.
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Lee, P.C.1
Meisel, D.2
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6
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0001386225
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Spectroscopic properties of 2-(or3)-o-(2,4,6-trinitrophenyl) adenosine 5′-triphosphate revealed by time-resolved fluorescence spectroscopy
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Ye, J.Y., Yamauchi, M., Yogi, O. and Ishikawa, M.: Spectroscopic Properties of 2-(or3)-O-(2,4,6-Trinitrophenyl) Adenosine 5′-Triphosphate Revealed by Time-Resolved Fluorescence Spectroscopy, J. Phys. Chem. B 103 (1999), 2812-2817.
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J. Phys. Chem. B
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Ye, J.Y.1
Yamauchi, M.2
Yogi, O.3
Ishikawa, M.4
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7
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0015504246
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Fluorescent modification of adenosine-containing coenzymes. Biological activities and spectroscopic properties
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Secrist III, J.A., Barrio, J.R., Leonard, N.J. and Weber, G.: Fluorescent Modification of Adenosine-Containing Coenzymes. Biological Activities and Spectroscopic Properties, Biochemistry 11 (1972), 3499-3506.
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Biochemistry
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Secrist, J.A.1
Barrio, J.R.2
Leonard, N.J.3
Weber, G.4
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8
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85021392560
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note
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This statement is simply based on our feeling with accumulated experience. Here we have no rigorous discussion about what factors determine signal-to-noise ratio of single-molecule fluorescence.
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9
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0032535107
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Grouping of independent single molecules on silicon surfaces
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Ishikawa, M., Yogi, O., Ye, J.Y., Yasuda, T. and Maruyama, Y.: Grouping of Independent Single Molecules on Silicon Surfaces, Anal. Chem. 70 (1998), 5198-5208.
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(1998)
Anal. Chem.
, vol.70
, pp. 5198-5208
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Ishikawa, M.1
Yogi, O.2
Ye, J.Y.3
Yasuda, T.4
Maruyama, Y.5
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10
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0000271482
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Distribution of single molecules in polymer thin films
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Biju, V., Yamauchi, M. and Ishikawa, M.: Distribution of Single Molecules in Polymer Thin Films, J. Photochem. Photobiol. A 140 (2001), 237-241.
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(2001)
J. Photochem. Photobiol. A
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, pp. 237-241
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Biju, V.1
Yamauchi, M.2
Ishikawa, M.3
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11
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0029900789
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Coformational transitions monitored for single molecules in solution
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Edman, L., Mets, U. and Rigler, R.: Coformational Transitions Monitored for Single Molecules in Solution, Proc. Natl. Sci. USA 93 (1996), 6710-6715.
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(1996)
Proc. Natl. Sci. USA
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, pp. 6710-6715
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Edman, L.1
Mets, U.2
Rigler, R.3
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12
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0030878722
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Phe molecule under physiological conditions
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Phe Molecule under Physiological Conditions, Proc. Natl. Acad. Sci. USA 94 (1997), 7932-7936.
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(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
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Jia, Y.1
Sytnik, A.2
Li, L.3
Vladimirov, S.4
Cooperman, B.S.5
Hochstrasser, R.M.6
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13
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0001032209
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Application of single molecule detection to DNA sequencing and sizing
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Ambrose, W.P., Goodwin, P.M., Jett, J.H., Johnson, M.E., Martin, J.C., Marrone, B.L., Schecker, J.A., Wilkerson, C.W. and Keller, R.A.: Application of Single Molecule Detection to DNA Sequencing and Sizing, Ber. Bunsenges. Phys. Chem. 97 (1993), 1535-1541.
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(1993)
Ber. Bunsenges. Phys. Chem.
, vol.97
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Ambrose, W.P.1
Goodwin, P.M.2
Jett, J.H.3
Johnson, M.E.4
Martin, J.C.5
Marrone, B.L.6
Schecker, J.A.7
Wilkerson, C.W.8
Keller, R.A.9
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14
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0031037501
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Probing single molecules and single nanoparticles by surface-enhanced raman scattering
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Nie, S. and Emory, S.R.: Probing Single Molecules and Single Nanoparticles by Surface-Enhanced Raman Scattering, Science 275 (1997), 1102-1106.
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(1997)
Science
, vol.275
, pp. 1102-1106
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Nie, S.1
Emory, S.R.2
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15
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0033520760
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Surface enhanced raman spectroscopy of individual rhodamine 6G molecules on large Ag Nanocrystals
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Michaels, A.M., Nirmal, M. and Brus, L.E.: Surface Enhanced Raman Spectroscopy of Individual Rhodamine 6G Molecules on Large Ag Nanocrystals, J. Am. Chem. Soc. 121 (1999), 9932-9939.
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J. Am. Chem. Soc.
, vol.121
, pp. 9932-9939
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Michaels, A.M.1
Nirmal, M.2
Brus, L.E.3
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16
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1642325089
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Single molecule detection using surface-enhanced raman scattering (SERS)
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Kneipp, K., Wang, Y., Kneipp, H., Perelman, L.T., Itzkan, I., Dasari, R.R. and Feld, M.S.: Single Molecule Detection Using Surface-Enhanced Raman Scattering (SERS), Phys. Rev. Lett. 78 (1997), 1667-1670.
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(1997)
Phys. Rev. Lett.
, vol.78
, pp. 1667-1670
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Kneipp, K.1
Wang, Y.2
Kneipp, H.3
Perelman, L.T.4
Itzkan, I.5
Dasari, R.R.6
Feld, M.S.7
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17
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0032879509
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Efficient raman enhancement and intermittent light emission observed in single gold nanocrystals
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Krug, II, J.T., Wang, G.D., Emony, S.R. and Nie, S.: Efficient Raman Enhancement and Intermittent Light Emission Observed in Single Gold Nanocrystals, J. Am. Chem. Soc. 121 (1999), 9208-9214.
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J. Am. Chem. Soc.
, vol.121
, pp. 9208-9214
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Krug, J.T.1
Wang, G.D.2
Emony, S.R.3
Nie, S.4
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18
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0031997556
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Single-molecule detection of a cyanine dye in silver colloidal solution using near-infrared surface-enhanced raman scattering
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Kneipp, K., Kneipp, H., Deinum, G., Itzkan, I., Dasari, R.R. and Feld, M.S.: Single-Molecule Detection of a Cyanine Dye in Silver Colloidal Solution Using Near-Infrared Surface-Enhanced Raman Scattering, Appl. Spectros. 52 (1998), 175-178.
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(1998)
Appl. Spectros.
, vol.52
, pp. 175-178
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Kneipp, K.1
Kneipp, H.2
Deinum, G.3
Itzkan, I.4
Dasari, R.R.5
Feld, M.S.6
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19
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0000107007
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Spectroscopy of single hemoglobin molecules by surface enhanced raman scattering
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Xu, H., Bjerneld, E.J., K. II, M. and Brjesson, L.: Spectroscopy of Single Hemoglobin Molecules by Surface Enhanced Raman Scattering, Phys. Rev. Lett. 83 (1999), 4357-4360.
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Phys. Rev. Lett.
, vol.83
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Xu, H.1
Bjerneld, E.J.K.2
Brjesson, L.3
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20
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0001558921
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Detection and identification of a single DNA base molecule using surface-enhanced raman scattering (SERS)
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A previous study (Kneipp, K., Kneipp, H., Kartha, B., Manoharan, R., Deinum, G., Itzkan, I., Dasari, R.R. and Feld, M.S.: Detection and Identification of a Single DNA Base Molecule Using Surface-Enhanced Raman Scattering (SERS), Phys. Rev. E57 (1998), 86281-86284) reported single-molecule detection and spectroscopy of adenine. This study, however, like References 16 and 18 detected SERS intensities of adenine on SERS-active hot particles subject to Brownian movement in a probe volume in solution using burst detection technique. Without imaging technique, no one identifies where are hot particles and what percentages of all particles are hot particles. Moreover, the temporal trajectory of SERS intensities on a single hot particle cannot be obtained by using burst detection technique.
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(1998)
Phys. Rev.
, vol.E57
, pp. 86281-86284
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Kneipp, K.1
Kneipp, H.2
Kartha, B.3
Manoharan, R.4
Deinum, G.5
Itzkan, I.6
Dasari, R.R.7
Feld, M.S.8
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21
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85021437203
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-
note
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The intensity of SERS showing blinking was constant witkin a factor of ∼3 irrespective of the difference in the average number of R6G molecules on a particle by a factor of 10 (0.3 and 3).
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22
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84950237951
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Spectral jumps of single molecules
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T. Basche, W.E. Moerner, M. Orrit and U.P. Wild (eds.), VCH, Weinheim
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Brown, R. and Orrit, M.: Spectral Jumps of Single Molecules, In: T. Basche, W.E. Moerner, M. Orrit and U.P. Wild (eds.), Single-Molecule Optical Detection, Imaging and Spectroscopy, VCH, Weinheim, 1996, pp. 109-142.
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(1996)
Single-Molecule Optical Detection, Imaging and Spectroscopy
, pp. 109-142
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Brown, R.1
Orrit, M.2
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23
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0032482812
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Correlation between surface enhanced raman scattering and absorbance changes in silver colloids. Evidence for the chemical enhancement mechanism
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Lecomte, S., Matejka, P. and Baron, M.H.: Correlation between Surface Enhanced Raman Scattering and Absorbance Changes in Silver Colloids. Evidence for the Chemical Enhancement Mechanism, Langmuir 14 (1998), 4373-4377.
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(1998)
Langmuir
, vol.14
, pp. 4373-4377
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Lecomte, S.1
Matejka, P.2
Baron, M.H.3
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24
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0001159677
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E. Chargaff and J.N. Davidson (eds.), Academic Press, New York
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Beaven, G.H., Holiday, E.R. and Johnson, E.A.: The Nucleic Acids, In: E. Chargaff and J.N. Davidson (eds.), Academic Press, New York, 1955, Vol. 1, pp. 493.
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(1955)
The Nucleic Acids
, vol.1
, pp. 493
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Beaven, G.H.1
Holiday, E.R.2
Johnson, E.A.3
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25
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0001351547
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Resonance raman spectroscopy. Current applications and prospects
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Morris, M.D. and Wallan, D.J.: Resonance Raman Spectroscopy. Current Applications and Prospects, Anal. Chem. 51 (1979), 182A-192A.
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(1979)
Anal. Chem.
, vol.51
, pp. 182A-192A
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Morris, M.D.1
Wallan, D.J.2
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26
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85021432323
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-
note
-
-6 M or higher concentrations. No these unexpected phenomena were observed for R6G.
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-
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27
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-
85021397524
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-
note
-
To increase the number of cationic adenine molecules, the pH of the solution was changed. Unfortunately under acidic conditions (pH = 3-4) Ag particles formed precipitations, which are much larger than hot particles composed of aggregated particles. Thus, it is impossible to implement SERS experiments using acidic solutions as they are.
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