An interactive web-based Pseudomonas aeruginosa genome database: Discovery of new genes, pathways and structures

Microbiology

Volumn 146, Issue 10, 2000, Pages 2351-2364

  Croft, L ^a   Beatson, S A ^a   Whitchurch, C B ^a   Huang, B ^a   Blakeley, R L ^a   Mattick, J S ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Adhesins; Gene families; Proteome; Regulators; Type II secretion

Indexed keywords

ADHESIN; BACTERIAL PROTEIN; CHEMOTACTIC PEPTIDE; HEMAGGLUTININ;

AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; BACTERIAL GENE; CHEMOTAXIS; CONTROLLED STUDY; DATA ANALYSIS; DATA BASE; ESCHERICHIA COLI; FIMBRIA; GENE LOCUS; GENE SEQUENCE; INFORMATION RETRIEVAL; INFORMATION SERVICE; MEDICAL INFORMATION; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN SECRETION; PSEUDOMONAS AERUGINOSA; REGULATOR GENE; RESPIRATORY SYSTEM; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

ESCHERICHIA COLI; PSEUDOMONAS AERUGINOSA;

EID: 0033765659     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-146-10-2351     Document Type: Article

References (66)

1. Nucleotide sequence and genetic organisation of the Bacillus subtilis comG operon
2. Cell cycle-dependent degradation of a flagellar motor component requires a novel-type response regulator
3. Identification of two genes with prepilin-like leader sequences required for type 4 fimbrial biogenesis in Pseudomonas aeruginosa
4. Genes involved in the biogenesis and function of type-4 fimbriae in Pseudomonas aeruginosa
5. Fimbrial biogenesis genes of Pseudomonas aeruginosa pilW and pilX increase the similarity of type 4 fimbriae to the GSP protein-secretion systems and pilY1 encodes a gonococcal PilC homologue
6. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
7. The GAF domain: An evolutionary link between diverse phototransducing proteins
8. The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signalling proteins
9. Cloning, expression, and DNA sequence analysis of genes encoding nontypeable Haemophilus influenzae high-molecular-weight surface-exposed proteins related to filamentous hemagglutinin of Bordetella pertussis
10. The Pfam protein families database
11. The secretion apparatus of Pseudomonas aeruginosa: Identification of a fifth pseudopilin, XcpX (GspK family)
12. The 102-kilobase unstable region of Yersinia pestis comprises a high-pathogenicity island linked to a pigmentation segment which undergoes internal rearrangement
13. The 102-kilobase pgm locus of Yersinia pestis: Sequence analysis and comparison of selected regions among different Yersinia pestis and Yersinia pseudotuberculosis strains
14. The 100 kDa haem: Haemopexin-binding protein of Haemophilus influenzae: Structure and localization
15. The pilG gene product, required for Pseudomonas aeruginosa pilus production and twitching motility, is homologous to the enteric, single-domain response regulator CheY
16. Characterization of a Pseudomonas aeruginosa gene cluster involved in pilus biosynthesis and twitching motility: Sequence similarity to the chemotaxis proteins of enterics and the gliding bacterium Myxococcus xanthus
17. The Pseudomonas aeruginosa pilK gene encodes a chemotactic methyltransferase (CheR) homologue that is translationally regulated
18. Genetic characterization of Bordetella pertussis filamentous haemagglutinin: A protein processed from an unusually large precursor
19. Control of bacterial chemotaxis
20. Molecular characterization of a gene encoding a homogentisate dioxygenase from Aspergillus nidulans and identification of its human and plant homologues
21. Genetic regulation of nitrogen fixation in rhizobia
22. Identification of a novel response regulator required for the swarmer-to-stalked-cell transition in Caulobacter crescentus
23. Correlation of Rhs elements with Escherichia coli population structure
24. Common components in the assembly of type 4 fimbriae, DNA transfer systems, filamentous phage and protein secretion apparatus; a general system for the formation of surface-associated protein complexes
25. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria
26. Pilus and nonpilus bacterial adhesins: Assembly and function in cell recognition
27. Pilus biogenesis via the chaperone/usher pathway: An integration of structure and function
28. FimC is a periplasmic PapD-like chaperone that directs assembly of type 1 pili in bacteria
29. Cloning and characterization of chemotaxis genes in Pseudomonas aeruginosa
30. The export systems of type 1 and F1C fimbriae are interchangeable but work in parental pairs
31. Molecular cloning and characterization of a chemotactic transducer gene in Pseudomonas aeruginosa
32. PapD, a periplasmic transport protein in P-pilus biogenesis
33. The filamentous haemagglutinin, a multifaceted adhesion produced by virulent Bordetella spp
34. Identification of an additional member of the secretin superfamily of proteins in Pseudomonas aeruginosa that is able to function in type II protein secretion
35. Isolation and characterization of chemotaxis mutants and genes of Pseudomonas aeruginosa
36. Common architecture of type 4 fimbriae and complexes involved in macromolecular traffic
37. A family of ATPases involved in active partitioning of diverse bacterial plasmids
38. Structure of the fibre-forming protein pilin at 2·6Å resolution
39. Signal transduction schemes of bacteria
40. Isolation and characterization of three Streptococcus pneumoniae transformation-specific loci by use of a lacZ reporter insertion vector
41. PAS: A multifunctional domain family comes to light
42. Molecular characterization of the hemolysin determinant of Serratia marcescens
43. The complete general secretory pathway in Gram negative bacteria
44. Duplication of pilus gene complexes of Haemophilus influenzae biogroup aegyptius
45. Recognition of a bacterial adhesion by an integrin: Macrophage CR3 (alpha M beta 2, CD11b/CD18) binds filamentous hemagglutinin of Bordetella pertussis
46. CheC and CheD interact to regulate methylation of Bacillus subtilis methyl-accepting chemotaxis proteins
47. SMART: A web-based tool for the study of genetically mobile domains
48. A reexamination of twitching motility in Pseudomonas aeruginosa
49. Identification of a novel gene, fimV, involved in twitching motility in Pseudomonas aeruginosa
50. Bacterial adhesins: Common themes and variations in architecture and assembly
51. Genetic analysis of a region of the Bordetella pertussis chromosome encoding filamentous hemagglutinin and the pleiotropic regulatory locus vir
52. Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
53. Amino acid substitutions in pilin of Pseudomonas aeruginosa - Effect on leader peptide cleavage, amino-terminal methylation, and pilus assembly
54. Genetic identification of chemotactic transducers for amino acids in Pseudomonas aeruginosa
55. Three cdg operons control cellular turnover of cyclic di-GMP in Acetobacter xylinum: Genetic organization and occurrence of conserved domains in isoenzymes
56. Protein secretion in Pseudomonas aeruginosa
57. Mutations in the consensus ATP-binding sites of XcpR and PilB eliminate extracellular protein secretion and pilus biogenesis in Pseudomonas aeruginosa
58. Nucleotide sequencing of the Proteus mirabilis calcium-independent hemolysin genes (hpmA and hpmB) reveals sequence similarity with the Serratia marcescens hemolysin genes (shlA and shlB)
59. Rhs elements comprise three subfamilies which diverged prior to acquisition by Escherichia coli
60. Motility in Myxococcus xanthus and its role in developmental aggregation
61. Bacterial chromosome segregation: Is there a mitotic apparatus?
62. Characterization of a Bordetella pertussis fimbrial gene cluster which is located directly downstream of the filamentous haemagglutinin gene
63. Mutational analysis of the Bordetella pertussis fim/fha gene cluster: Identification of a gene with sequence similarities to haemolysin accessory genes involved in export of FHA
64. Vibrio cholerae Hcp, a secreted protein coregulated with HlyA
65. Identification and characterization of two chemotactic transducers for inorganic phosphate in Pseudomonas aeruginosa
66. Exoenzyme S of Pseudomonas aeruginosa is secreted by a type III pathway