The zebrafish thrombospondin 3 and 4 Genes (thbs3 and thbs4): CDNA and protein structure

Mitochondrial DNA

Volumn 13, Issue 5, 2002, Pages 277-285

  Adolph, Kenneth W ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Amino acid sequence; cDNA; thbs3; thbs4; Thrombospondin 3 and 4; Zebrafish (Danio rerio )

Indexed keywords

DANIO; DANIO RERIO;

COMPLEMENTARY DNA; THROMBOSPONDIN; THROMBOSPONDIN 3; THROMBOSPONDIN 4;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; GENETICS; METABOLISM; MOLECULAR GENETICS; PROTEIN TERTIARY STRUCTURE; SEQUENCE ANALYSIS; ZEBRA FISH;

AMINO ACID SEQUENCE; ANIMALS; DNA, COMPLEMENTARY; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, TERTIARY; SEQUENCE ANALYSIS, PROTEIN; THROMBOSPONDINS; ZEBRAFISH;

EID: 0036805510     PISSN: 19401736     EISSN: 19401744     Source Type: Journal    
DOI: 10.1080/1042517021000019278     Document Type: Article

References (29)

1. Adams, J.C. (2001) Thrombospondins: multifunctional regulators of cell interactions, Ann. Rev. Cell Dev. Biol. 17, 25-51. (Pubitemid 33096170)
2. Adolph, K.W. (2001) A thrombospondin homologue in Drosophila melanogaster: cDNA and protein structure, Gene 269, 177-184. (Pubitemid 32488917)
3. Adolph, K.W. and Bornstein, P. (1999) The human thrombospondin 3 gene: analysis of transcription initiation and an alternatively spliced transcript, Mol. Cell Biol. Res. Commun. 2, 47-52. (Pubitemid 129536948)
4. Adolph, K.W., Long, G.L.,Winfield, S., Ginns, E.I. and Bornstein, P. (1995) Structure and organization of the human thrombospondin 3 gene (THBS3), Genomics 27, 329-336.
5. Adolph, K.W., Liska, D.J. and Bornstein, P. (1997) Analysis of the promoter and transcription start sites of the human thrombospondin 2 gene (THBS2), Gene 193, 5-11. (Pubitemid 27303598)
6. Baenziger, N.L., Brodie, G.N. and Majerus, P.W. (1971) A thrombin-sensitive protein of human platelet membranes, Proc. Natl Acad. Sci. USA 68, 240-243.
7. Bateman, A., Birney, E., Cerruti, L., Durbin, R., Etwiller, L., Eddy, S.R., Griffiths-Jones, S., Howe, K.L., Marshall, M. and Sonnhammer, E.L. (2002) The pfam protein families database, Nucleic Acids Res. 30, 276-280. (Pubitemid 34679563)
8. Bornstein, P. (2001) Thrombospondins as matricellular modulators of cell function, J. Clin. Investig. 107, 929-934. (Pubitemid 32323400)
9. Bornstein, P., ORourke, K.,Wikstrom, K.,Wolf, F.W., Katz, R., Li, P. and Dixit, V.M. (1991) A second, expressed thrombospondin gene (Thbs2 ) exists in the mouse genome, J. Biol. Chem. 266, 12821-12824. (Pubitemid 21907269)
10. Briggs, M.D., Hoffman, S.M.G., King, L.M., Olsen, A.S., Mohrenweiser, H., Leroy, J.G., Mortier, G.R., Rimoin, D.L., Lachman, R.S., Gaines, E.S., Cekleniak, J.A., Knowlton, R.G. and Cohn, D.H. (1995) Pseudoachondroplasia and multiple epiphyseal dysplasia due to mutations in the cartilage oligomeric matrix protein gene, Nat. Genet. 10, 330-336.
11. Haffter,P., Granato, M., Brand, M., Mullins, M.C.,Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J.M., Jiang, Y.-J., Heisenberg, C.-P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C. and Nusslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio, Development 123, 1-36. (Pubitemid 27056733)
12. Hecht, J.T., Nelson, L.D., Crowder, E., Wang, Y., Elder, F.F.B., Harrison, W.R., Francomano, C.A., Prange, C.K., Lennon, G.G., Deere, M. and Lawler, J. (1995) Mutations in exon 17B of cartilage oligomeric matrix protein (COMP) cause pseudoachondroplasia, Nat. Genet. 10, 325-329.
13. Hennessy, S.W., Frazier, B.A., Kim, D.D., Deckwerth, T.L., Baumgartel, D.M., Rotwein, P. and Frazier, W.A. (1989) Complete thrombospondinmRNA sequence includes potential regulatory sites in the 30 untranslated region, J. Cell Biol. 108, 729-736. (Pubitemid 19065868)
14. Iruela-Arispe, M.L., Lombardo, M., Krutzsch, H.C., Lawler, J. and Roberts, D.D. (1999) Inhibition of angiogenesis by thrombospondin-1 is mediated by 2 independent regions within the type 1 repeats, Circulation 100, 1423-1431. (Pubitemid 29451703)
15. Jimenez, B., Volpert, O.V., Crawford, S.E., Febbraio, M., Silverstein, R.L. and Bouck, N. (2000) Signals leading to apoptosisdependent inhibition of neovascularization by thrombospondin-1, Nat. Med. 6, 41-48. (Pubitemid 30048524)
16. LaBell, T.L. and Byers, P.H. (1993) Sequence and characterization of the complete human thrombospondin 2 cDNA: potential regulatory role for the 30 untranslated region, Genomics 17, 225-229. (Pubitemid 23205083)
17. Laherty, C.D., ORourke, K., Wolf, F.W., Katz, R., Seldin, M.F. and Dixit, V.M. (1992) Characterization of mouse thrombospondin 2 sequence and expression during cell growth and development, J. Biol. Chem. 267, 3274-3281.
18. Lawler, J. (2000) The functions of thrombospondin-1 and -2, Curr. Opin. Cell Biol. 12, 634-640.
19. Lawler, J. and Hynes, R.O. (1986) The structure of human thrombospondin, an adhesive glycoprotein with multiple calcium-binding sites and homologies with several different proteins, J. Cell Biol. 103, 1635-1648. (Pubitemid 17189019)
20. Lawler, J., Duquette, M., Whittaker, C.A., Adams, J.C., McHenry, K. and DeSimone, D.W. (1993) Identification and characterization of thrombospondin-4, a new member of the thrombospondin gene family, J. Cell Biol. 120, 1059-1067. (Pubitemid 23056310)
21. Lawler, J., McHenry, K., Duquette, M. and Derick, L. (1995) Characterization of human thrombospondin-4, J. Biol. Chem. 270, 2809-2814.
22. Letunic, I., Goodstadt, L., Dickens, N.J., Doerks, T., Schultz, J., Mott, R., Ciccarelli, F., Copley, R.R., Ponting, C.P. and Bork, P. (2002) Recent improvements to the SMART domainbased sequence annotation resource, Nucleic Acids Res. 30, 242-244. (Pubitemid 34679554)
23. Nasevicius, A. and Ekker, S.C. (2001) The zebrafish as a novel system for functional genomics and therapeutic development applications, Curr. Opin. Mol. Ther. 3, 224-228. (Pubitemid 32624569)
24. Nielsen, H., Engelbrecht, J., Brunak, S. and von Heijne, G. (1997) Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites, Protein Eng. 10, 1-6.
25. Oldberg, A., Antonsson, P., Lindblom, K. and Heinegard, D. (1992) COMP (cartilage oligomeric matrix protein) is structurally related to the thrombospondins, J. Biol. Chem. 267, 22346-22350.
26. Patton, E.E. and Zon, L.I. (2001) The art and design of genetic screens: zebrafish, Nat. Rev. Genet. 2, 956-966. (Pubitemid 33691092)
27. Qabar, A., Derick, L., Lawler, J. and Dixit, V. (1995) Thrombospondin 3 is a pentameric molecule held together by interchain disulfide linkage involving two cysteine residues, J. Biol. Chem. 270, 12725-12729.
28. Thisse, C. and Zon, L.I. (2002) Organogenesis-heart and blood formation from the zebrafish point of view, Science 295, 457-462. (Pubitemid 34101627)
29. Vos, H.L., Devarayalu, S., de Vries, Y. and Bornstein, P. (1992) Thrombospondin 3 (Thbs3 ), a new member of the thrombospondin gene family, J. Biol. Chem. 267, 12192-12196.