A genomic switch at the transition from cell proliferation to terminal differentiation in the Drosophila eye

Developmental Cell

Volumn 3, Issue 4, 2002, Pages 511-521

  Jasper, Heinrich ^a   Benes, Vladimir ^b   Atzberger, Ann ^b   Sauer, Silvia ^b   Ansorge, Wilhelm ^b   Bohmann, Dirk ^a  

^a UNIVERSITY OF ROCHESTER MEDICAL CENTER   (United States)

^b EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

ARTICLE; CELL DIFFERENTIATION; CELL FATE; CELL GROWTH; CELL PROLIFERATION; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; EYE DEVELOPMENT; FLUORESCENCE ACTIVATED CELL SORTING; GENE EXPRESSION PROFILING; GENE SWITCHING; NONHUMAN; PHASE TRANSITION; SEQUENCE ANALYSIS; SPATIAL ORIENTATION; STEM CELL; TIME;

DROSOPHILA; DROSOPHILA MELANOGASTER; INSECTA; MELANOGASTER;

EID: 0036773904     PISSN: 15345807     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1534-5807(02)00297-6     Document Type: Article

References (44)

1. Baker, N.E. (2001). Cell proliferation, survival, and death in the Drosophila eye. Semin. Cell Dev. Biol. 12, 499-507.
2. Benlali, A., Draskovic, I., Hazelett, D.J., and Treisman, J.E. (2000). act up controls actin polymerization to alter cell shape and restrict Hedgehog signaling in the Drosophila eye disc. Cell 101, 271-281.
3. Blackshaw, S., Fraioli, R.E., Furukawa, T., and Cepko, C.L. (2001). Comprehensive analysis of photoreceptor gene expression and the identification of candidate retinal disease genes. Cell 107, 579-589.
4. Bonini, N.M., and Fortini, M.E. (1999). Surviving Drosophila eye development: integrating cell death with differentiation during formation of a neural structure. Bioessays 21, 991-1003.
5. Brand, A.H., and Perrimon, N. (1993). Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118, 401-415.
6. Bussemaker, H.J., Li, H., and Siggia, E.D. (2001). Regulatory element detection using correlation with expression. Nat. Genet. 27, 167-171.
7. Cooper, M.T., and Bray, S.J. (2000). R7 photoreceptor specification requires Notch activity. Curr. Biol. 10, 1507-1510.
8. Cutforth, T., and Gaul, U. (1999). A methionine aminopeptidase and putative regulator of translation initiation is required for cell growth and patterning in Drosophila. Mech. Dev. 82, 23-28.
9. Czerny, T., Halder, G., Kloter, U., Souabni, A., Gehring, W.J., and Busslinger, M. (1999). twin of eyeless, a second Pax-6 gene of Drosophila, acts upstream of eyeless in the control of eye development. Mol. Cell 3, 297-307.
10. Duronio, R.J., and O'Farrell, P.H. (1994). Developmental control of a G1-S transcriptional program in Drosophila. Development 120, 1503-1515.
11. Ellis, M.C., O'Neill, E.M., and Rubin, G.M. (1993). Expression of Drosophila glass protein and evidence for negative regulation of its activity in non-neuronal cells by another DNA-binding protein. Development 119, 855-865.
12. Flores, G.V., Daga, A., Kalhor, H.R., and Banerjee, U. (1998). Lozenge expressed in pluripotent precursor cells and patterns multiple cell types in the Drosophila eye through the control of cell-specific transcription factors. Development 125, 3681-3687.
13. Freeman, M. (1997). Cell determination strategies in the Drosophila eye. Development 124, 261-270.
14. Galloni, M., and Edgar, B.A. (1999). Cell-autonomous and non-autonomous growth-defective mutants of Drosophila melanogaster. Development 126, 2365-2375.
15. Hardie, R.C., and Raghu, P. (2001). Visual transduction in Drosophila. Nature 413, 186-193.
16. Hay, B.A., Maile, R., and Rubin, G.M. (1997). P element insertion-dependent gene activation in the Drosophila eye. Proc. Natl. Acad. Sci. USA 94, 5195-5200.
17. Higashijima, S., Kojima, T., Michiue, T., Ishimaru, S., Emori, Y., and Saigo, K. (1992). Dual Bar homeo box genes of Drosophila required in two photoreceptor cells, R1 and R6, and primary pigment cells for normal eye development. Genes Dev. 6, 50-60.
18. Hirose, F., Yamaguchi, M., Handa, H., Inomata, Y., and Matsukage, A. (1993). Novel 8-base pair sequence (Drosophila DNA replication-related element) and specific binding factor involved in the expression of Drosophila genes for DNA polymerase α and proliferating cell nuclear antigen. J. Biol. Chem. 268, 2092-2099.
19. Hirose, F., Yamaguchi, M., Kuroda, K., Omori, A., Hachiya, T., Ikeda, M., Nishimoto, Y., and Matsukage, A. (1996). Isolation and characterization of cDNA for DREF, a promoter-activating factor for Drosophila DNA replication-related genes. J. Biol. Chem. 271, 3930-3937.
20. Hirose, F., Ohshima, N., Shiraki, M., Inoue, Y.H., Taguchi, O., Nishi, Y., Matsukage, A., and Yamaguchi, M. (2001). Ectopic expression of DREF induces DNA synthesis, apoptosis, and unusual morphogenesis in the Drosophila eye imaginal disc: possible interaction with Polycomb and trithorax group proteins. Mol. Cell. Biol. 21, 7231-7242.
21. Jasper, H., Benes, V., Schwager, C., Sauer, S., Clauder-Munster, S., Ansorge, W., and Bohmann, D. (2001). The genomic response of the Drosophila embryo to JNK signaling. Dev. Cell 1, 579-586.
22. Karim, F.D., and Rubin, G.M. (1998). Ectopic expression of activated Ras1 induces hyperplastic growth and increased cell death in Drosophila imaginal tissues. Development 125, 1-9.
23. Kimmel, B.E., Heberlein, U., and Rubin, G.M. (1990). The homeo domain protein rough is expressed in a subset of cells in the developing Drosophila eye where it can specify photoreceptor cell subtype. Genes Dev. 4, 712-727.
24. Kumar, J., and Moses, K. (1997). Transcription factors in eye development: a gorgeous mosaic? Genes Dev. 11, 2023-2028.
25. Moses, K., and Rubin, G.M. (1991). Glass encodes a site-specific DNA-binding protein that is regulated in response to positional signals in the developing Drosophila eye. Genes Dev. 5, 583-593.
26. Neufeld, T.P., de la Cruz, A.F., Johnston, L.A., and Edgar, B.A. (1998). Coordination of growth and cell division in the Drosophila wing. Cell 93, 1183-1193.
27. Nguyen, D.N., Liu, Y., Litsky, M.L., and Reinke, R. (1997). The sidekick gene, a member of the immunoglobulin superfamily, is required for pattern formation in the Drosophila eye. Development 124, 3303-3312.
28. Ohno, K., Takahashi, Y., Hirose, F., Inoue, Y.H., Taguchi, O., Nishida, Y., Matsukage, A., and Yamaguchi, M. (2000). Characterization of a Drosophila homologue of the human myelodysplasia/myeloid leukemia factor (MLF). Gene 260, 133-143.
29. Prober, D.A., and Edgar, B.A. (2000). Ras1 promotes cellular growth in the Drosophila wing. Cell 100, 435-446.
30. Reifegerste, R., and Moses, K. (1999). Genetics of epithelial polarity and pattern in the Drosophila retina. Bioessays 21, 275-285.
31. Roth, F.P., Hughes, J.D., Estep, P.W., and Church, G.M. (1998). Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation. Nat. Biotechnol. 16, 939-945.
32. Saha, S., Bardelli, A., Buckhaults, P., Velculescu, V.E., Rago, C., St Croix, B., Romans, K.E., Choti, M.A., Lengauer, C., Kinzler, K.W., and Vogelstein, B. (2001). A phosphatase associated with metastasis of colorectal cancer. Science 294, 1343-1346.
33. Salecker, I., Clandinin, T.R., and Zipursky, S.L. (1998). Hedgehog and Spitz: making a match between photoreceptor axons and their targets. Cell 95, 587-590.
34. Simon, M.A. (2000). Receptor tyrosine kinases: specific outcomes from general signals. Cell 103, 13-15.
35. St Croix, B., Rago, C., Velculescu, V., Traverso, G., Romans, K.E., Montgomery, E., Lal, A., Riggins, G.J., Lengauer, C., Vogelstein, B., and Kinzler, K.W. (2000). Genes expressed in human tumor endothelium. Science 289, 1197-1202.
36. Tautz, D., and Pfeifle, C. (1989). A non-radioactive in situ hybridization method for the localization of specific RNAs in Drosophila embryos reveals translational control of the segmentation gene hunchback. Chromosoma 98, 81-85.
37. Tavazoie, S., Hughes, J.D., Campbell, M.J., Cho, R.J., and Church, G.M. (1999). Systematic determination of genetic network architeture. Nat. Genet. 22, 281-285.
38. Therrien, M., Wong, A.M., Kwan, E., and Rubin, G.M. (1999). Functional analysis of CNK in RAS signaling. Proc. Natl. Acad. Sci. USA 96, 13259-13263.
39. Tomlinson, A., Bowtell, D.D., Hafen, E., and Rubin, G.M. (1987). Localization of the sevenless protein, a putative receptor for positional information, in the eye imaginal disc of Drosophila. Cell 51, 143-150.
40. Treisman, J.E., Follette, P.J., O'Farrell, P.H., and Rubin, G.M. (1995). Cell proliferation and DNA replication defects in a Drosophila MCM2 mutant. Genes Dev. 9, 1709-1715.
41. Velculescu, V.E., Zhang, L., Vogelstein, B., and Kinzler, K.W. (1995). Serial analysis of gene expression. Science 270, 484-487.
42. Virlon, B., Cheval, L., Buhler, J.M., Billon, E., Doucet, A., and Elalouf, J.M. (1999). Serial microanalysis of renal transcriptomes. Proc. Natl. Acad. Sci. USA 96, 15286-15291.
43. Wasserman, J.D., Urban, S., and Freeman, M. (2000). A family of rhomboid-like genes: Drosophila rhomboid-1 and roughoid/rhomboid-3 cooperate to activate EGF receptor signaling. Genes Dev. 14, 1651-1663.
44. Yamaguchi, M., Hirose, F., Nishimoto, Y., Naruge, T., Ikeda, M., Hachiya, T., Tamai, K., Kuroda, K., and Matsukage, A. (1995). Expression patterns of DNA replication enzymes and the regulatory factor DREF during Drosophila development analyzed with specific antibodies. Biol. Cell 85, 147-155.