-
1
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
-
Krogh, A.; Larsson, B.; von Heijne G.; Sonnhammer, E.L.L. Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes. J. Mol. Biol. 2001, 305, 567-580.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
Von Heijne, G.3
Sonnhammer, E.L.L.4
-
3
-
-
0026716643
-
Membrane protein structure prediction. Hydrophobicity analysis and positive-inside rule
-
von Heijne, G. Membrane protein structure prediction. Hydrophobicity analysis and positive-inside rule. J. Mol. Biol. 1992, 225, 487-494.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 487-494
-
-
Von Heijne, G.1
-
4
-
-
0028568176
-
TopPred II: An improved software for membrane protein structure predictions
-
Claros, M.G.; von Heijne, G. TopPred II: an improved software for membrane protein structure predictions. Comput. Appl. Biosci. 1994, 10, 685-686.
-
(1994)
Comput. Appl. Biosci.
, vol.10
, pp. 685-686
-
-
Claros, M.G.1
Von Heijne, G.2
-
5
-
-
0028211273
-
A model recognition approach to the prediction of all- helical membrane protein structure and topology
-
Jones, D.T.; Taylor, W.R.; Thornton, J.M. A model recognition approach to the prediction of all- helical membrane protein structure and topology. Biochemistry 1994, 33, 3038-3049.
-
(1994)
Biochemistry
, vol.33
, pp. 3038-3049
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
6
-
-
0030020734
-
Topology prediction of membrane proteins
-
Persson, B.; Argos, P. Topology prediction of membrane proteins. Protein Sci. 1996, 5, 363-371.
-
(1996)
Protein Sci.
, vol.5
, pp. 363-371
-
-
Persson, B.1
Argos, P.2
-
7
-
-
0030038634
-
Topology prediction for helical transmembrane proteins at 86% accuracy
-
Rost, B.; Fariselli, P.; Casadio, R. Topology prediction for helical transmembrane proteins at 86% accuracy. Protein Sci. 1996, 5, 1704-1718.
-
(1996)
Protein Sci.
, vol.5
, pp. 1704-1718
-
-
Rost, B.1
Fariselli, P.2
Casadio, R.3
-
8
-
-
0032561132
-
Principles governing amino acid composition of integral membrane proteins: Application to topology prediction
-
Tusnády, G.E.; Simon, I. Principles governing amino acid composition of integral membrane proteins: Application to topology prediction. J. Mol. Biol. 1998, 283, 489-506.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 489-506
-
-
Tusnády, G.E.1
Simon, I.2
-
9
-
-
0023676242
-
Topogenic signals in integral membrane proteins
-
von Heijne, G.; Gavel, Y. Topogenic signals in integral membrane proteins. Eur. J. Biochem. 1988, 174, 671-678.
-
(1988)
Eur. J. Biochem.
, vol.174
, pp. 671-678
-
-
Von Heijne, G.1
Gavel, Y.2
-
10
-
-
0027264995
-
Predicting the topology of eukaryotic membrane proteins
-
Sipos, L.; von Heijne, G. Predicting the topology of eukaryotic membrane proteins. Eur. J. Biochem. 1993, 213, 1333-1340.
-
(1993)
Eur. J. Biochem.
, vol.213
, pp. 1333-1340
-
-
Sipos, L.1
Von Heijne, G.2
-
11
-
-
0342351613
-
Predicting the orientation of eukaryotic membrane proteins
-
Hartmann, E.; Rapaport, T.A.; Lodish, H.F. Predicting the orientation of eukaryotic membrane proteins. Proc. Natl. Acad. Sci. U.S.A. 1989, 86, 5786-5790.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 5786-5790
-
-
Hartmann, E.1
Rapaport, T.A.2
Lodish, H.F.3
-
12
-
-
0026521552
-
The amino acid composition is different between the cytoplasmic and extracellular sides in membrane proteins
-
Nakashima, H.; Nishikawa, K. The amino acid composition is different between the cytoplasmic and extracellular sides in membrane proteins. FEBS Lett. 1992, 303, 141-146.
-
(1992)
FEBS Lett.
, vol.303
, pp. 141-146
-
-
Nakashima, H.1
Nishikawa, K.2
-
13
-
-
0027551944
-
Conformational preference functions for predicting helices in membrane proteins
-
Juretić, D.; Lee, B.K.; Trinajstić, N.; Williams, R.W. Conformational preference functions for predicting helices in membrane proteins. Biopolymers 1993, 33, 255-273.
-
(1993)
Biopolymers
, vol.33
, pp. 255-273
-
-
Juretić, D.1
Lee, B.K.2
Trinajstić, N.3
Williams, R.W.4
-
14
-
-
77956966578
-
-
Párkányi, C., Ed.; Elsevier Science: Amsterdam, Theoretical Organic Chemistry, Chapter 13
-
Juretić, D.; Lučić, B.; Zucić, D.; Trinajstić, N. In Theoretical and Computational Chemistry; Párkányi, C., Ed.; Elsevier Science: Amsterdam, 1998; Vol. 5, Theoretical Organic Chemistry, Chapter 13, p 405-445.
-
(1998)
Theoretical and Computational Chemistry
, vol.5
, pp. 405-445
-
-
Juretić, D.1
Lučić, B.2
Zucić, D.3
Trinajstić, N.4
-
15
-
-
0030759333
-
Prediction of transmembrane α-helices in prokaryotic membrane proteins: The dense alignment surface method
-
Cserzö, M.; Wallin, E.; Simon, I.; von Heijne, G.; Elofsson, A. Prediction of transmembrane α-helices in prokaryotic membrane proteins: the dense alignment surface method. Protein Eng. 1997, 10, 673-676.
-
(1997)
Protein Eng.
, vol.10
, pp. 673-676
-
-
Cserzö, M.1
Wallin, E.2
Simon, I.3
Von Heijne, G.4
Elofsson, A.5
-
16
-
-
0035109170
-
MPtopo: A database of membrane protein topology
-
Jayasinghe, S.; Hristova, K.; White, S.H. MPtopo: A database of membrane protein topology. Protein Sci. 2001, 10, 455-458.
-
(2001)
Protein Sci.
, vol.10
, pp. 455-458
-
-
Jayasinghe, S.1
Hristova, K.2
White, S.H.3
-
17
-
-
0035823075
-
Structure of MsbA from E. Coli: A homolog of the multidrug resistance ATP binding cassette (ABC) transporters
-
Chang, G.; Roth, C.B. Structure of MsbA from E. coli: A homolog of the multidrug resistance ATP binding cassette (ABC) transporters. Science 2001, 293, 1793-1800.
-
(2001)
Science
, vol.293
, pp. 1793-1800
-
-
Chang, G.1
Roth, C.B.2
-
18
-
-
0034495418
-
A collection of well characterised integral membrane proteins
-
Möller, S.; Kriventseva, E.V.; Apweiler, R. A collection of well characterised integral membrane proteins. Bioinformatics 2000, 16, 1159-1160.
-
(2000)
Bioinformatics
, vol.16
, pp. 1159-1160
-
-
Möller, S.1
Kriventseva, E.V.2
Apweiler, R.3
-
19
-
-
0025796712
-
The SWISS-PROT proteins sequence bank
-
Bairoch, A.; Boeckmann, B. The SWISS-PROT proteins sequence bank. Nucleic Acids Res. 1991, 19, 2247-2249.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 2247-2249
-
-
Bairoch, A.1
Boeckmann, B.2
-
20
-
-
0030861438
-
The SWISS-PROT protein sequence data bank and its supplement TrEMBL
-
Bairoch, A.; Apweiler, R. The SWISS-PROT protein sequence data bank and its supplement TrEMBL. Nucleic Acids Res. 1997, 25, 31-36.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 31-36
-
-
Bairoch, A.1
Apweiler, R.2
-
21
-
-
0028364252
-
Transmembrane topology of two kainate receptor subunits revealed by N-glycosilation
-
Wo, Z.G.; Oswald, R.E. Transmembrane topology of two kainate receptor subunits revealed by N-glycosilation. Proc. Natl. Acad. Sci. U.S.A. 1994; 91, 7154-7158.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A.
, vol.91
, pp. 7154-7158
-
-
Wo, Z.G.1
Oswald, R.E.2
-
22
-
-
0028819612
-
Topology profile for a glutamate receptor: Three transmembrane domains and a channel-lining reentrant membrane loop
-
Bennett, J.A.; Dingledine, R. Topology profile for a glutamate receptor: three transmembrane domains and a channel-lining reentrant membrane loop. Neuron. 1995, 14, 373-384.
-
(1995)
Neuron.
, vol.14
, pp. 373-384
-
-
Bennett, J.A.1
Dingledine, R.2
-
23
-
-
0029976603
-
Using CLUSTAL for multiple sequence alignments
-
Higgins, D.G.; Thompson, J.D.; Gibson, T.J. Using CLUSTAL for multiple sequence alignments. Methods Enzymol. 1996, 266, 383-402.
-
(1996)
Methods Enzymol.
, vol.266
, pp. 383-402
-
-
Higgins, D.G.1
Thompson, J.D.2
Gibson, T.J.3
-
24
-
-
0029619259
-
Knowledge-based protein secondary structure assignment
-
Frishman, D.; Argos, P. Knowledge-based protein secondary structure assignment. Proteins 1995, 23, 566-579.
-
(1995)
Proteins
, vol.23
, pp. 566-579
-
-
Frishman, D.1
Argos, P.2
-
25
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte, J.; Doolittle, R.F. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 1982, 157, 105-132.
-
(1982)
J. Mol. Biol.
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
26
-
-
0032550906
-
Preference functions for prediction of membrane-buried helices in integral membrane proteins
-
Juretić; D.; Zucić, D.; Lučić, B.; Trinajstić, N. Preference functions for prediction of membrane-buried helices in integral membrane proteins. Computers Chem. 1998, 22, 279-294.
-
(1998)
Computers Chem.
, vol.22
, pp. 279-294
-
-
Juretić1
, D.2
Zucić, D.3
Lučić, B.4
Trinajstić, N.5
-
27
-
-
0000908693
-
The preference functions method for predicting protein helical turns with membrane propensity
-
Juretić, D.; Lučin, A. The preference functions method for predicting protein helical turns with membrane propensity. J. Chem. Inf. Comput. Sci. 1998, 38, 575-585.
-
(1998)
J. Chem. Inf. Comput. Sci.
, vol.38
, pp. 575-585
-
-
Juretić, D.1
Lučin, A.2
-
28
-
-
0001365986
-
Sequence analysis of membrane proteins with the Web server SPLIT
-
Juretić, D.; Jerončić A.; Zucić, D. Sequence analysis of membrane proteins with the Web server SPLIT. Croat. Chem. Acta 1999, 72, 975-997.
-
(1999)
Croat. Chem. Acta
, vol.72
, pp. 975-997
-
-
Juretić, D.1
Jerončić, A.2
Zucić, D.3
-
29
-
-
0027382240
-
Prediction of transmembrane helices from hydrophobic characteristics of proteins
-
Ponnuswamy, P.K.; Gromiha, M.M., Prediction of transmembrane helices from hydrophobic characteristics of proteins. Int. J. Peptide Protein Res. 1993, 42, 326-341.
-
(1993)
Int. J. Peptide Protein Res.
, vol.42
, pp. 326-341
-
-
Ponnuswamy, P.K.1
Gromiha, M.M.2
-
30
-
-
0023645034
-
Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins
-
Cornette, J.L.; Cease, K.B.; Margalit, H.; Spouge, J.L.; Berzofsky, J.A.; DeLisi, C. Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins. J. Mol. Biol. 1987, 195, 659-685.
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 659-685
-
-
Cornette, J.L.1
Cease, K.B.2
Margalit, H.3
Spouge, J.L.4
Berzofsky, J.A.5
DeLisi, C.6
-
31
-
-
0002666171
-
-
Fasman, G.D., Ed.; Plenmn Press: New York, Chapter 10
-
Garnier, R.; Robson, B. In Prediction of Protein Structure and the Principles of Protein Conformation; Fasman, G.D., Ed.; Plenmn Press: New York, 1989; Chapter 10, p 417.
-
(1989)
Prediction of Protein Structure and the Principles of Protein Conformation
, pp. 417
-
-
Garnier, R.1
Robson, B.2
-
32
-
-
0019333534
-
Hydrophobic packing and spatial arrangement of amino acid residues in globular proteins
-
Ponnuswamy, P.K.; Prabhakaran, M.; Manavalan, P. Hydrophobic packing and spatial arrangement of amino acid residues in globular proteins. Biochim. Biophys. Acta 1980, 623, 301-316.
-
(1980)
Biochim. Biophys. Acta
, vol.623
, pp. 301-316
-
-
Ponnuswamy, P.K.1
Prabhakaran, M.2
Manavalan, P.3
-
33
-
-
0011485080
-
Predicting membrane protein secondary structure: Preference functions method for finding optimal conformational parameters
-
Juretić, D.; Lučić, B.; Trinajstić, N. Predicting membrane protein secondary structure: preference functions method for finding optimal conformational parameters. Croat. Chem. Acta 1993, 66, 201-208.
-
(1993)
Croat. Chem. Acta
, vol.66
, pp. 201-208
-
-
Juretić, D.1
Lučić, B.2
Trinajstić, N.3
-
34
-
-
0022434109
-
A statistical technique for predicting membrane protein structure
-
Kuhn, L.A.; Leigh, J.S., A statistical technique for predicting membrane protein structure. Biochim. Biophys. Acta 1985, 828, 351-361.
-
(1985)
Biochim. Biophys. Acta
, vol.828
, pp. 351-361
-
-
Kuhn, L.A.1
Leigh, J.S.2
-
35
-
-
0022510143
-
Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins
-
Engelman, D.M.; Steitz, T.A.; Goldman, A. Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem. 1986, 15, 321-353.
-
(1986)
Annu. Rev. Biophys. Biophys. Chem.
, vol.15
, pp. 321-353
-
-
Engelman, D.M.1
Steitz, T.A.2
Goldman, A.3
-
36
-
-
0027244433
-
Quadratic minimization of predictors for protein secondary structure: Application to transmembrane α-helices
-
Edelman, J. Quadratic minimization of predictors for protein secondary structure: Application to transmembrane α-helices. J. Mol. Biol. 1993, 232, 165-191.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 165-191
-
-
Edelman, J.1
-
37
-
-
0024290472
-
Amino acid preferences for specific locations at the ends of α helices
-
Richardson, J.S.; Richardson, D.C. Amino acid preferences for specific locations at the ends of α helices. Science 1988, 240, 1648-1652.
-
(1988)
Science
, vol.240
, pp. 1648-1652
-
-
Richardson, J.S.1
Richardson, D.C.2
-
39
-
-
0343851561
-
Prediction of initiation sites for protein folding with α-helix preferences
-
Juretić, D.; Jerončić, A.; Zucić, D. Prediction of initiation sites for protein folding with α-helix preferences. Periodicum Biologorum 1999, 101, 339-347.
-
(1999)
Periodicum Biologorum
, vol.101
, pp. 339-347
-
-
Juretić, D.1
Jerončić, A.2
Zucić, D.3
-
40
-
-
0031660702
-
Geometrical and sequence characteristics of α-helices in globular proteins
-
Kumar, S.; Bansal, M. Geometrical and sequence characteristics of α-helices in globular proteins. Biophysical J. 1998, 75, 1935-1944.
-
(1998)
Biophysical J.
, vol.75
, pp. 1935-1944
-
-
Kumar, S.1
Bansal, M.2
-
41
-
-
0021691817
-
Analysis of membrane and surface protein sequences with the hydrophobic moment plot
-
Eisenberg, D.; Schwarz, E.; Komaromy, M.; Wall, R. Analysis of Membrane and Surface Protein Sequences with the Hydrophobic Moment Plot. J. Mol. Biol. 1984, 179, 125-142.
-
(1984)
J. Mol. Biol.
, vol.179
, pp. 125-142
-
-
Eisenberg, D.1
Schwarz, E.2
Komaromy, M.3
Wall, R.4
-
42
-
-
0029775624
-
Clusters of charged residues in protein three-dimensional structures
-
Zhu, Z.-Y.; Karlin, S. Clusters of charged residues in protein three-dimensional structures. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 8350-8355.
-
(1996)
Proc. Natl. Acad. Sci. U.S.A.
, vol.93
, pp. 8350-8355
-
-
Zhu, Z.-Y.1
Karlin, S.2
-
43
-
-
0027957715
-
Genetic and molecular characterization of the Escherichia coli secD operon and its products
-
Pogliano, K.J.; Beckwith, J. Genetic and molecular characterization of the Escherichia coli secD operon and its products. J. Bacteriol. 1994, 176, 804-814.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 804-814
-
-
Pogliano, K.J.1
Beckwith, J.2
-
44
-
-
0031826040
-
SOSUI: Classification and secondary structure prediction system for membrane proteins
-
Hirokawa, T.; Boon-Chieng, S.; Mitaku, S. SOSUI: classification and secondary structure prediction system for membrane proteins. Bioinformatics 1998, 14, 378-379.
-
(1998)
Bioinformatics
, vol.14
, pp. 378-379
-
-
Hirokawa, T.1
Boon-Chieng, S.2
Mitaku, S.3
-
45
-
-
0028568176
-
TopPred II: An improved software for membrane protein structure predictions
-
Claros, M.G.; von Heijne, G. TopPred II: an improved software for membrane protein structure predictions. Comput. Appl. Biosci. 1994, 10, 685-686.
-
(1994)
Comput. Appl. Biosci.
, vol.10
, pp. 685-686
-
-
Claros, M.G.1
Von Heijne, G.2
-
46
-
-
0028999795
-
TMAP: A new email and WWW services for membrane-protein structural predictions
-
Milpetz, F., Argos, P.; Persson, B. TMAP: A new email and WWW services for membrane-protein structural predictions. Trends Biochem. Sci. 1995, 20, 204-205.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 204-205
-
-
Milpetz, F.1
Argos, P.2
Persson, B.3
-
47
-
-
0026609104
-
The distribution of charged amino acids in mitochondrial inner- membrane proteins suggests different modes of membrane integration for nuclearly and mitochondrially encoded proteins
-
Gavel, Y.; von Heijne, G. The distribution of charged amino acids in mitochondrial inner- membrane proteins suggests different modes of membrane integration for nuclearly and mitochondrially encoded proteins. Eur. J. Biochem. 1992, 205, 1207-1215.
-
(1992)
Eur. J. Biochem.
, vol.205
, pp. 1207-1215
-
-
Gavel, Y.1
Von Heijne, G.2
-
48
-
-
0030795114
-
Mutational analysis of the mouse 5-HT7 receptor: Importance of the third intracellular loop for receptor-G-protein interaction
-
Obosi, L.A.; Hen, R.; Beadle, D.J.; Bermudez, I.; King, L.A. Mutational analysis of the mouse 5-HT7 receptor: importance of the third intracellular loop for receptor-G-protein interaction. FEBS Lett. 1997, 412, 321-324.
-
(1997)
FEBS Lett.
, vol.412
, pp. 321-324
-
-
Obosi, L.A.1
Hen, R.2
Beadle, D.J.3
Bermudez, I.4
King, L.A.5
-
49
-
-
0030943262
-
Basic amino acids at the C-terminus of the third intracellular loop are required for the activation of phospholipase C by cholecystokinin-B receptors
-
Wang, H.L. Basic amino acids at the C-terminus of the third intracellular loop are required for the activation of phospholipase C by cholecystokinin-B receptors. J. Neurochem. 1997, 68, 1728-1735.
-
(1997)
J. Neurochem.
, vol.68
, pp. 1728-1735
-
-
Wang, H.L.1
-
50
-
-
0033048623
-
A conserved arginine in the distal third intracellular loop of the mu-opioid receptor is required for G protein activation
-
Wang, H.L. A conserved arginine in the distal third intracellular loop of the mu-opioid receptor is required for G protein activation. J. Neurochem. 1999, 72, 1307-1314.
-
(1999)
J. Neurochem.
, vol.72
, pp. 1307-1314
-
-
Wang, H.L.1
-
51
-
-
0030791975
-
Anionic phospholipids are determinants of membrane protein topology
-
Van Klompenburg, W.; Nilssen, I.; von Heijne, G., De Kruijff, B. Anionic phospholipids are determinants of membrane protein topology. EMBO J. 1997, 16, 4261-4266.
-
(1997)
EMBO J.
, vol.16
, pp. 4261-4266
-
-
Van Klompenburg, W.1
Nilssen, I.2
Von Heijne, G.3
De Kruijff, B.4
-
52
-
-
0032535118
-
Identification of two regions in the cytoplasmic domain of CD44 through which PMA, calcium, and forskolin differentially regulate the binding of CD44 to hyaluronic acid
-
Liu, D.; Liu, T.; Sy, M.S. Identification of two regions in the cytoplasmic domain of CD44 through which PMA, calcium, and forskolin differentially regulate the binding of CD44 to hyaluronic acid. Cell Immunol. 1998, 190, 132-140.
-
(1998)
Cell Immunol.
, vol.190
, pp. 132-140
-
-
Liu, D.1
Liu, T.2
Sy, M.S.3
-
53
-
-
0025572743
-
A positively charged region is a determinant of the orientation of cytoplasmic membrane proteins in Escherichia coli
-
Yamane, K.; Akiyama, Y.; Ito, K.; Mizushima, S. A positively charged region is a determinant of the orientation of cytoplasmic membrane proteins in Escherichia coli. J. Biol. Chem. 1990, 265, 21166-21171.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 21166-21171
-
-
Yamane, K.1
Akiyama, Y.2
Ito, K.3
Mizushima, S.4
-
54
-
-
0029087713
-
On the physical basis for the cispositive rule describing protein interaction in biological membranes
-
Krishtalik, L.I.; Cramer, W.A. On the physical basis for the cispositive rule describing protein interaction in biological membranes. FEBS Lett. 1995, 369, 140-143.
-
(1995)
FEBS Lett.
, vol.369
, pp. 140-143
-
-
Krishtalik, L.I.1
Cramer, W.A.2
-
55
-
-
0033609831
-
A conserved amino acid motif (R-X-G-R-R) in the Glutl glucose transporter is an important determinant of membrane topology
-
Sato, M.; Mueckler, M. A conserved amino acid motif (R-X-G-R-R) in the Glutl glucose transporter is an important determinant of membrane topology. J. Biol. Chem. 1999, 274, 24721-24725.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 24721-24725
-
-
Sato, M.1
Mueckler, M.2
-
56
-
-
0031018881
-
Role of conserved residues in hydropbilic loop 8-9 of the lactose permease
-
Pazdernik, N.J.; Jessen-Marshall, A.E.; Brooker, R.J. Role of conserved residues in hydropbilic loop 8-9 of the lactose permease. J. Bacteriol. 1997, 179, 735-741.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 735-741
-
-
Pazdernik, N.J.1
Jessen-Marshall, A.E.2
Brooker, R.J.3
-
57
-
-
0034090633
-
Roles of charged residues in the conserved motif, G-X-X-X-D/ER/K-X-G-[X]-R/K-R/K, of the lactose permease of Escherichia coli
-
Pazdernik, N.J.; Matzke, E.A.; Jessen-Marshall, A.E.; Brooker, R.J. Roles of charged residues in the conserved motif, G-X-X-X-D/ER/K-X-G-[X]-R/K-R/K, of the lactose permease of Escherichia coli. J. Membr. Biol. 2000, 174, 31-40.
-
(2000)
J. Membr. Biol.
, vol.174
, pp. 31-40
-
-
Pazdernik, N.J.1
Matzke, E.A.2
Jessen-Marshall, A.E.3
Brooker, R.J.4
-
58
-
-
0035827549
-
+ antiporter
-
+ antiporter. J. Biol. Chem. 2001, 276, 20330-20339.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 20330-20339
-
-
Tamura, N.1
Konishi, S.2
Iwaki, S.3
Kimura-Someya, T.4
Nada, S.5
Yamaguchi, A.6
-
59
-
-
0026630552
-
2-adrenergic receptors based upon characteristics in primary structure
-
2-adrenergic receptors based upon characteristics in primary structure. J. Biol. Chem. 1992, 267, 8342-8346.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 8342-8346
-
-
Okamoto, T.1
Nishimoto, I.2
-
60
-
-
0029953103
-
Alanine scanning mutagenesis of conserved arginine/lysine-arginine/lysine-X-X-arginine/lysine G protein-acivating motifs on ml muscarinic acetylcholine receptors
-
Lee, N.H.; Geoghagen, N.S.M.; Cheng, E.; Cline, R.T.; Fraser, C.M. Alanine scanning mutagenesis of conserved arginine/lysine-arginine/lysine-X-X-arginine/lysine G protein-acivating motifs on ml muscarinic acetylcholine receptors. Molecular Pharmacol. 1996, 50, 140-148.
-
(1996)
Molecular Pharmacol.
, vol.50
, pp. 140-148
-
-
Lee, N.H.1
Geoghagen, N.S.M.2
Cheng, E.3
Cline, R.T.4
Fraser, C.M.5
-
61
-
-
0028289513
-
Structure and function of G protein-coupled receptors
-
Strader, C.D.; Fong, T.M.; Michael, R.T.; Underwood, D.; Dixon, R.A.F. Structure and function of G protein-coupled receptors. Annu. Rev. Biochem. 1994, 63, 101-132.
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 101-132
-
-
Strader, C.D.1
Fong, T.M.2
Michael, R.T.3
Underwood, D.4
Dixon, R.A.F.5
-
62
-
-
0026937176
-
Mutations in the V2 vasopressin receptor gene are associated with X-linked nephrogenic diabetes insipidus
-
Pan, Y.; Metzenberg, A.; Das, S.; Jing, B.; Gitschier, J. Mutations in the V2 vasopressin receptor gene are associated with X-linked nephrogenic diabetes insipidus. Nat. Genet. 1992, 2, 103-106.
-
(1992)
Nat. Genet.
, vol.2
, pp. 103-106
-
-
Pan, Y.1
Metzenberg, A.2
Das, S.3
Jing, B.4
Gitschier, J.5
-
63
-
-
0029150958
-
Novel mutation of the luteinizing hormone receptor gene causing male gonadotropin-independent precocious puberty
-
Latronico, A.C.; Anasti, J.; Arnhold, I.J.; Mendonca, B.B.; Domenice, S.; Albano, M.C.; Zachman, K.; Wajchenberg, B.L.; Tsigos, C.A. Novel mutation of the luteinizing hormone receptor gene causing male gonadotropin-independent precocious puberty. J. Clin. Endocrinol. Metab. 1995, 80, 2490-2494.
-
(1995)
J. Clin. Endocrinol. Metab.
, vol.80
, pp. 2490-2494
-
-
Latronico, A.C.1
Anasti, J.2
Arnhold, I.J.3
Mendonca, B.B.4
Domenice, S.5
Albano, M.C.6
Zachman, K.7
Wajchenberg, B.L.8
Tsigos, C.A.9
-
64
-
-
0027369421
-
Somatic mutations in the thyrotropin receptor gene cause hyperfunctioning thyroid adenomas
-
Parma, J.; Duprez, L.; Van Sande, J.; Cochanx, P.; Gervy, C.; Mockel, J.; Dumont, J.E.; Vassart, G. Somatic mutations in the thyrotropin receptor gene cause hyperfunctioning thyroid adenomas. Nature 1993, 365, 649-651.
-
(1993)
Nature
, vol.365
, pp. 649-651
-
-
Parma, J.1
Duprez, L.2
Van Sande, J.3
Cochanx, P.4
Gervy, C.5
Mockel, J.6
Dumont, J.E.7
Vassart, G.8
-
65
-
-
0030918946
-
Molecular basis of the long-QT syndrome associated with deafness
-
Splawski, I.; Timothy, K.W.; Vincent, G.M.; Atkinson, D.L.; Keating, M.T. Molecular basis of the long-QT syndrome associated with deafness. N. Engl. J. Med. 1997, 336, 1562-1567.
-
(1997)
N. Engl. J. Med.
, vol.336
, pp. 1562-1567
-
-
Splawski, I.1
Timothy, K.W.2
Vincent, G.M.3
Atkinson, D.L.4
Keating, M.T.5
-
66
-
-
0033570916
-
An unstable transmembrane segment in the cystic fibrosis transmembrane conductance regulator
-
Tector, M.; Hartl, F.U. An unstable transmembrane segment in the cystic fibrosis transmembrane conductance regulator. EMBO J. 1999, 18, 6290-6298.
-
(1999)
EMBO J.
, vol.18
, pp. 6290-6298
-
-
Tector, M.1
Hartl, F.U.2
-
67
-
-
0026483172
-
+-channel inactivation
-
+-channel inactivation. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 10910-10914.
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 10910-10914
-
-
West, J.W.1
Patton, D.E.2
Scheuer, T.3
Wang, Y.4
Goldin, A.L.5
Catterall, W.A.6
-
68
-
-
0031020814
-
Molecular determinants of inactivation and G protein modulation in the intracellular loop connecting domains I and II of the calcium channel alpha 1A subunit
-
Herlitze, S.; Hockerman, G.H.; Scheuer, T.; Catterall, W.A. Molecular determinants of inactivation and G protein modulation in the intracellular loop connecting domains I and II of the calcium channel alpha 1A subunit. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 1512-1516.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 1512-1516
-
-
Herlitze, S.1
Hockerman, G.H.2
Scheuer, T.3
Catterall, W.A.4
-
69
-
-
0035812599
-
Energetics, stability and prediction of transmembrane helices
-
Jayasinghe, S.; Hristova, K.; White, S.H. Energetics, stability and prediction of transmembrane helices. J. Mol. Biol. 2001, 312, 927-934.
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 927-934
-
-
Jayasinghe, S.1
Hristova, K.2
White, S.H.3
-
70
-
-
0023677723
-
Multi-spanning membrane proteins: How accurate are the models?
-
Lodish, H.F. Multi-spanning membrane proteins: how accurate are the models? Trends Biochem. Sci. 1988, 13, 332-334.
-
(1988)
Trends Biochem. Sci.
, vol.13
, pp. 332-334
-
-
Lodish, H.F.1
-
71
-
-
0033983453
-
Asparagine-mediated self-association of a model transmembrane helix
-
Choma, C.; Gratkowski, H.; Lear, J.D.; DeGrado, W.F. Asparagine-mediated self-association of a model transmembrane helix. Nature Struct. Biol. 2000, 7, 161-166.
-
(2000)
Nature Struct. Biol.
, vol.7
, pp. 161-166
-
-
Choma, C.1
Gratkowski, H.2
Lear, J.D.3
DeGrado, W.F.4
-
72
-
-
0033044637
-
Machine learning approaches to the prediction of signal peptides and other protein sorting signals
-
Nielsen, H.; Brunak, S.; von Heijne, G. Machine learning approaches to the prediction of signal peptides and other protein sorting signals. Protein Eng. 1999, 12, 3-9.
-
(1999)
Protein Eng.
, vol.12
, pp. 3-9
-
-
Nielsen, H.1
Brunak, S.2
Von Heijne, G.3
-
73
-
-
0034899781
-
Evaluation of methods for the prediction of membrane spanning regions
-
Möller, S.; Croning, M.D.R.; Apweiler, R. Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 2001, 17, 646-653.
-
(2001)
Bioinformatics
, vol.17
, pp. 646-653
-
-
Möller, S.1
Croning, M.D.R.2
Apweiler, R.3
|