CASA: A server for the critical assessment of protein sequen ce alignment accuracy

Bioinformatics

Volumn 18, Issue 3, 2002, Pages 496-497

  Kahsay, Robel Y ^a   Wang, Guoli ^b   Dongre, Nataraj ^a   Gao, Guang ^a   Dunbrack, Roland L ^b  

^a UNIVERSITY OF DELAWARE   (United States)

^b FOX CHASE CANCER CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; DATA BASE; DEVICE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STRUCTURE; QUALITY CONTROL; SEQUENCE ALIGNMENT;

EID: 0036209245     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.3.496     Document Type: Article

References (10)

1. Gapped BLAST and PSI-BLAST: A new generation of database programs
2. LiveBench-1: Continuous benchmarking of protein structure prediction servers
3. Predicting protein structure using only sequence information
4. SCOP: A structural classification of proteins database
5. DBAli: A database of protein structure alignments
6. Rapid and sensitive sequence comparison with FASTP and FASTA
7. Large-scale comparison of protein sequence alignment algorithms with structure alignments
8. Protein structure alignment by incremental Combinatorial Extension (CE) of the optimal path
9. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
10. BAliBASE: A benchmark alignment database for the evaluation of multiple alignment programs