DBAli: A database of protein structure alignments

Bioinformatics

Volumn 17, Issue 8, 2001, Pages 746-747

  Marti Renom M A ^a   Ilyin, V A ^a   Sali, A ^a  

^a ROCKEFELLER UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CALCULATION; DATA BASE; PRIORITY JOURNAL; PROTEIN STRUCTURE; SEQUENCE ANALYSIS;

SIGANUS;

EID: 0034853119     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.8.746     Document Type: Article

References (19)

1. The Pfam protein families database
2. The Protein Data Bank
3. Structure-based evaluation of sequence comparison and fold recognition alignment accuracy
4. Assessing the performance of fold recognition methods by means of a comprehensive benchmark
5. Protein folds and families: Sequence and structure alignments
6. SCOP: A structural classification of proteins database
7. Threading a database of protein cores
8. HOMSTRAD: A database of protein structure alignments for homologous families
9. The CATH database provides insights into protein structure/function relationships
10. A data bank merging related protein structures and sequences
11. Comparative protein modelling by satisfaction of spatial restraints
12. Derivation of rules for comparative protein modeling from a database of protein structure alignments
13. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
14. Compare3d applet
15. Contemporary approaches to protein structure classification
16. A comprehensive comparison of multiple sequence alignment programs
17. BAliBASE: A benchmark alignment database for the evaluation of multiple alignment programs