rtREV: An amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny

Journal of Molecular Evolution

Volumn 55, Issue 1, 2002, Pages 65-73

  Dimmic, Matthew W ^a   Rest, Joshua S ^a   Mindell, David P ^a   Goldstein, Richard A ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

General reversible transition Markov model; HIV; Lentivirus; Maximum likelihood method; Pol gene; Retroid

Indexed keywords

AMINO ACID; POL PROTEIN; RNA DIRECTED DNA POLYMERASE;

AMINO ACID SUBSTITUTION; ARTICLE; ENZYME ANALYSIS; HUMAN IMMUNODEFICIENCY VIRUS; LENTIVIRINAE; MAXIMUM LIKELIHOOD METHOD; NONHUMAN; PHYLOGENY; PROBABILITY; RETROVIRUS; CLASSIFICATION; ENZYMOLOGY; GENETIC PROCEDURES; GENETICS; MOLECULAR EVOLUTION; STATISTICAL MODEL;

AMINO ACID SUBSTITUTION; EVOLUTION, MOLECULAR; GENETIC TECHNIQUES; LIKELIHOOD FUNCTIONS; PHYLOGENY; RETROVIRIDAE; RNA-DIRECTED DNA POLYMERASE; SUPPORT, NON-U.S. GOV'T; SUPPORT, U.S. GOV'T, NON-P.H.S.; SUPPORT, U.S. GOV'T, P.H.S.;

HUMAN IMMUNODEFICIENCY VIRUS; LENTIVIRUS; RNA VIRUSES; UNIDENTIFIED RETROVIRUS;

EID: 0036017382     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-001-2304-y     Document Type: Article

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