Analysis of gene expression in arabidopsis thaliana by array hybridization with genomic dna fragments aligned along chromosomal regions

Plant Journal

Volumn 30, Issue 2, 2002, Pages 247-255

  Hanano, Shigeru ^a   Amagai, Masayuki ^b   Kaneko, Takakazu ^b   Kuwata, Chikara ^b   Tsugane, Taneaki ^b   Sakurai, Nozomu ^b   Nakamura, Yasukazu ^b   Shibata, Daisuke ^b   Tabata, Satoshi ^b  

^a UNIVERSITY OF WARWICK   (United Kingdom)

^b KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Arabidopsis; Functional genomics; Genomic DNA array; Novel transcripts

Indexed keywords

DNA SEQUENCES; GENES; SYNTHESIS (CHEMICAL);

HYBRIDIZATION;

PLANTS (BOTANY);

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; EUKARYOTA;

COMPLEMENTARY DNA; PLANT DNA; PLANT RNA;

ARABIDOPSIS; ARTICLE; CHROMOSOME; DNA MICROARRAY; GENE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETIC TRANSCRIPTION; GENETICS; GENOME; METABOLISM; METHODOLOGY; MOLECULAR CLONING; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

ARABIDOPSIS; CHROMOSOMES; CLONING, MOLECULAR; DNA, COMPLEMENTARY; DNA, PLANT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENOME, PLANT; GENOMIC LIBRARY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, PLANT; TRANSCRIPTION, GENETIC;

EID: 0035999901     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2002.01277.x     Document Type: Article

References (22)

1. A large scale analysis of cDNA in Arabidopsis thaliana: Generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries
2. Functional genomics in plants
3. Exploring the metabolic and genetic control of gene expression on a genomic scale
4. Differential gene expression in Arabidopsis monitored using cDNA arrays
5. DNA microarrays for studies of higher plants and other photosynthetic organisms
6. Yeast microarrays for genome wide parallel genetic and gene expression analysis
7. A novel MYB-related gene from Arabidopsis thaliana expressed in developing anthers
8. Generation of a high-quality P1 library of Arabidopsis suitable for chromosome walking
9. Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning
10. Genomics, gene expression and DNA arrays
11. An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis
12. Arabidopsis thaliana: A model plant for genome analysis
13. DNA chips: State of the art
14. Towards Arabidopsis genome analysis: Monitoring expression profiles of 1400 genes using cDNA microarrays
15. Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones
16. Quantitative monitoring of gene expression patterns with a complementary DNA microarray
17. RNA expression analysis using a 30 base pair resolution Escherichia coli genome array
18. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana
19. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
20. The Arabidopsis Adh gene exhibits diverse nucleosome arrangements within a small DNase I-sensitive domain
21. Comparative analysis of the nucleosomal structure of rye, wheat and their relatives
22. Arabidopsis microarray service facilities