Arabidopsis thaliana: A model plant for genome analysis

Science

Volumn 282, Issue 5389, 1998, Pages

  Meinke, David W ^a   Cherry, J Michael ^b   Dean, Caroline ^c   Rounsley, Steven D ^d   Koornneef, Maarten ^e  

^a OKLAHOMA STATE UNIVERSITY   (United States)

^b STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c JOHN INNES CENTRE   (United Kingdom)

^d J CRAIG VENTER INSTITUTE   (United States)

^e WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

PLANT DNA;

ARABIDOPSIS; DATA BASE; GENE SEQUENCE; GENOME; MUTANT; NONHUMAN; PLANT GROWTH; PRIORITY JOURNAL; RESEARCH; REVIEW;

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRASSICACEAE; EMBRYOPHYTA; MAGNOLIOPHYTA;

EID: 0005324072     PISSN: 00368075     EISSN: None     Source Type: Journal    
DOI: 10.1126/science.282.5389.662     Document Type: Review

References (62)

1. E. M. Meyerowitz and C. R. Somerville, Arabidopsis (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1994).
2. F. Laibach, Bot. Arch. 44, 439 (1943); G. P. Rédei, Bibliogr. Genet. 20, 1 (1970).
3. F. Laibach, Bot. Arch. 44, 439 (1943); G. P. Rédei, Bibliogr. Genet. 20, 1 (1970).
4. M. Koornneef et al., J. Hered. 74, 265 (1983).
5. D. W. Meinke and I. M. Sussex, Dev. Biol. 72, 50 (1979); C. R. Somerville and W. L. Ogren, Nature 280, 833 (1979); M. Koornneef, E. Rolff, C. J. P. Spruit, Z. Pflanzenphysiol. 106, 147 (1980).
6. D. W. Meinke and I. M. Sussex, Dev. Biol. 72, 50 (1979); C. R. Somerville and W. L. Ogren, Nature 280, 833 (1979); M. Koornneef, E. Rolff, C. J. P. Spruit, Z. Pflanzenphysiol. 106, 147 (1980).
7. D. W. Meinke and I. M. Sussex, Dev. Biol. 72, 50 (1979); C. R. Somerville and W. L. Ogren, Nature 280, 833 (1979); M. Koornneef, E. Rolff, C. J. P. Spruit, Z. Pflanzenphysiol. 106, 147 (1980).
8. G. An, B. D. Watson, C. C. Chiang, Plant Physiol. 81, 301 (1986); A. M. Lloyd et al., Science 234, 464 (1986); K. A. Feldmann and M. D. Marks, Mol. Gen. Genet. 208, 1 (1987).
9. G. An, B. D. Watson, C. C. Chiang, Plant Physiol. 81, 301 (1986); A. M. Lloyd et al., Science 234, 464 (1986); K. A. Feldmann and M. D. Marks, Mol. Gen. Genet. 208, 1 (1987).
10. G. An, B. D. Watson, C. C. Chiang, Plant Physiol. 81, 301 (1986); A. M. Lloyd et al., Science 234, 464 (1986); K. A. Feldmann and M. D. Marks, Mol. Gen. Genet. 208, 1 (1987).
11. E. M. Meyerowitz and R. E. Pruitt, Science 229, 1214 (1985).
12. G. R. Fink, Genetics 149, 473 (1998).
13. C. Koncz, N.-H. Chua, J. Schell, Eds., Methods in Arabidopsis Research (World Scientific, River Edge, NJ, 1992); J. M. Martinez-Zapater and J. Salinas Eds., Arabidopsis Protocols, vol. 82 of Methods in Molecular Biology (Humana, Totowa, NJ, 1998).
14. C. Koncz, N.-H. Chua, J. Schell, Eds., Methods in Arabidopsis Research (World Scientific, River Edge, NJ, 1992); J. M. Martinez-Zapater and J. Salinas Eds., Arabidopsis Protocols, vol. 82 of Methods in Molecular Biology (Humana, Totowa, NJ, 1998).
15. For example, see S. A. Kempin et al., Nature 389, 802 (1997).
16. N. Bechtold, J. Ellis, G. Pelletier, C. R. Acad. Sci. Paris 316, 1194 (1993); S. C. Chang et al., Plant J. 5, 551 (1994).
17. N. Bechtold, J. Ellis, G. Pelletier, C. R. Acad. Sci. Paris 316, 1194 (1993); S. C. Chang et al., Plant J. 5, 551 (1994).
18. V. Sundaresan, Trends Plant Sci. 1, 184 (1996).
19. D. Meinke and M. Koornneef, Plant J. 12, 247 (1997).
20. P. Fransz et al., ibid. 13, 867 (1998).
21. C. Lister and C. Dean, ibid. 4, 745 (1993); C. Alonso-Blanco et al., ibid. 14, 259 (1998).
22. C. Lister and C. Dean, ibid. 4, 745 (1993); C. Alonso-Blanco et al., ibid. 14, 259 (1998).
23. E. J. Finnegan, R. K. Genger, W. J. Peacock, E. S. Dennis, Annu. Rev. Plant Physiol. Plant Mol. Biol. 49, 223 (1998).
24. D. Preuss, S. Y. Rhee, R. W. Davis, Science 264, 1458 (1994); G. P. Copenhaver, W. E. Browne, D. Preuss, Proc. Natl. Acad. Sci. U.S.A. 95, 247 (1998).
25. D. Preuss, S. Y. Rhee, R. W. Davis, Science 264, 1458 (1994); G. P. Copenhaver, W. E. Browne, D. Preuss, Proc. Natl. Acad. Sci. U.S.A. 95, 247 (1998).
26. For recent examples of identifying knockouts in desired genes, see E. C. McKinney et al., Plant J. 8, 613 (1995); P. J. Krysan, J. C. Young, F. Tax, M. R. Sussman, Proc. Natl. Acad. Sci. U.S.A. 93, 8145 (1996).
27. For recent examples of identifying knockouts in desired genes, see E. C. McKinney et al., Plant J. 8, 613 (1995); P. J. Krysan, J. C. Young, F. Tax, M. R. Sussman, Proc. Natl. Acad. Sci. U.S.A. 93, 8145 (1996).
28. For information, contact http://www.bio.net/hypermail/ARABIDOPSIS/.
29. D. Meinke et al., Eds., "Multinational coordinated Arabidopsis thaliana genome research project, progress report, year six" (National Science Foundation Publication 97-131, Arlington, VA, 1997).
30. M. Bevan et al., Plant Cell 9, 476 (1997).
31. H. Hofte et al., Plant J. 4, 1051 (1993); T. Newman et al., Plant Physiol. 106, 1241 (1994).
32. H. Hofte et al., Plant J. 4, 1051 (1993); T. Newman et al., Plant Physiol. 106, 1241 (1994).
33. S. Choi, R. A. Creelman, J. E. Mullet, R. A. Wing, Plant Mol. Biol. Rep. 13, 124 (1995); F. Creusot et al., Plant J. 8, 763 (1995).
34. S. Choi, R. A. Creelman, J. E. Mullet, R. A. Wing, Plant Mol. Biol. Rep. 13, 124 (1995); F. Creusot et al., Plant J. 8, 763 (1995).
35. R. Schmidt et al., Science 270, 480 (1995); E. A. Zachgo et al., Genome Res. 6, 19 (1996); R. Schmidt, K. Love, J. West, Z. Lenehan, C. Dean, Plant J. 11, 563 (1997).
36. R. Schmidt et al., Science 270, 480 (1995); E. A. Zachgo et al., Genome Res. 6, 19 (1996); R. Schmidt, K. Love, J. West, Z. Lenehan, C. Dean, Plant J. 11, 563 (1997).
37. R. Schmidt et al., Science 270, 480 (1995); E. A. Zachgo et al., Genome Res. 6, 19 (1996); R. Schmidt, K. Love, J. West, Z. Lenehan, C. Dean, Plant J. 11, 563 (1997).
38. M. Bevan et al., Nature 391, 485 (1998).
39. S. Sato et al., DNA Res. 4, 215 (1997).
40. C. Chang, S. F. Kwok, A. B. Bleecker, E. M. Meyerowitz, Science 262, 539 (1993); G. E. Schaller and A. B. Bleecker, ibid. 270, 1809 (1995).
41. C. Chang, S. F. Kwok, A. B. Bleecker, E. M. Meyerowitz, Science 262, 539 (1993); G. E. Schaller and A. B. Bleecker, ibid. 270, 1809 (1995).
42. J. Li, P. Nagpal, V. Vitart, T. C. McMorris, J. Chory, ibid. 272, 398 (1996); M. Szekeres et al., Cell 85, 171 (1996).
43. J. Li, P. Nagpal, V. Vitart, T. C. McMorris, J. Chory, ibid. 272, 398 (1996); M. Szekeres et al., Cell 85, 171 (1996).
44. E. Huala et al., Science 278, 2120 (1997); M. Ahmad, J. A. Jarillo, O. Smirnova, A. R. Cashmore, Nature 392, 720 (1998).
45. E. Huala et al., Science 278, 2120 (1997); M. Ahmad, J. A. Jarillo, O. Smirnova, A. R. Cashmore, Nature 392, 720 (1998).
46. H. Guo, H. Yang, T. C. Mockler, C. Lin, Science 279, 1360 (1998); Z. Y. Wang and E. M. Tobin, Cell 93, 1207 (1998).
47. H. Guo, H. Yang, T. C. Mockler, C. Lin, Science 279, 1360 (1998); Z. Y. Wang and E. M. Tobin, Cell 93, 1207 (1998).
48. P. H. Quail et al., Science 268, 675 (1995).
49. M. Koornneef, C. Alonso-Blanco, A. J. M. Peeters, W. Soppe, Annu. Rev. Plant Physiol. Plant Mol. Biol. 49, 345 (1998).
50. E. S. Coen and E. M. Meyerowitz, Nature 353, 31 (1991).
51. N. Wei et al., Curr. Biol. 8, 919 (1998).
52. Y. Miyamoto and A. Sancar, Proc. Natl. Acad. Sci. U.S.A. 95, 6097 (1998).
53. A. F. Bent et al., Science 265, 1856 (1994); M. Mindrinos, F. Katagiri, G.-L. Yu F. M. Ausubel, Cell 78, 1089 (1994); K. S. Century et al., Science 278, 1963 (1997).
54. A. F. Bent et al., Science 265, 1856 (1994); M. Mindrinos, F. Katagiri, G.-L. Yu F. M. Ausubel, Cell 78, 1089 (1994); K. S. Century et al., Science 278, 1963 (1997).
55. A. F. Bent et al., Science 265, 1856 (1994); M. Mindrinos, F. Katagiri, G.-L. Yu F. M. Ausubel, Cell 78, 1089 (1994); K. S. Century et al., Science 278, 1963 (1997).
56. K. R. Jaglo-Ottosen, S. J. Gilmour, D. G. Zarka, O. Schabenberger, M. F. Thomashow, Science 280, 104 (1998); Z. G. Xin and J. Browse, Proc. Natl. Acad. Sci. U.S.A. 95, 7799 (1998).
57. K. R. Jaglo-Ottosen, S. J. Gilmour, D. G. Zarka, O. Schabenberger, M. F. Thomashow, Science 280, 104 (1998); Z. G. Xin and J. Browse, Proc. Natl. Acad. Sci. U.S.A. 95, 7799 (1998).
58. C. Nawrath, Y. Poirier, C. Somerville, Proc. Natl. Acad. Sci. U.S.A. 91, 12760 (1994).
59. D. Weigel and O. Nilsson, Nature 377, 495 (1995).
60. Between 1971 and 1994 there were 16 patents in the U.S. Patent Database that included the word Arabidopsis. From 1995 to present this number increased to 156.
61. M. Schena et al., Proc. Natl. Acad. Sci. U.S.A. 93, 10614 (1996); A. Marshall and J. Hodgson, Nature Biotech. 16, 27 (1998).
62. M. Schena et al., Proc. Natl. Acad. Sci. U.S.A. 93, 10614 (1996); A. Marshall and J. Hodgson, Nature Biotech. 16, 27 (1998).