-
1
-
-
0032579989
-
Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3
-
Kawarabayasi, Y., Sawada, M., Horikawa, H. et al. 1998, Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3, DNA Res., 5, 55-76 & 147-155.
-
(1998)
DNA Res.
, vol.5
, pp. 55-76
-
-
Kawarabayasi, Y.1
Sawada, M.2
Horikawa, H.3
-
2
-
-
0033616977
-
Complete genome sequence of an aerobic hyperthermophilic crenarchaeota, Aeropyrum pernix K1
-
Kawarabayasi, Y., Hino, Y., Horikawa, H. et al. 1999, Complete genome sequence of an aerobic hyperthermophilic crenarchaeota, Aeropyrum pernix K1, DNA Res., 6, 84-76 & 147-155.
-
(1999)
DNA Res.
, vol.6
, pp. 84-176
-
-
Kawarabayasi, Y.1
Hino, Y.2
Horikawa, H.3
-
3
-
-
16044367245
-
Complete genome sequence of the methanogenic archaon, Methanococcus jannaschii
-
Bult, C. J., White, O., Olsen, G. J. et al. 1996, Complete genome sequence of the methanogenic archaon, Methanococcus jannaschii, Science, 273, 1058-1073.
-
(1996)
Science
, vol.273
, pp. 1058-1073
-
-
Bult, C.J.1
White, O.2
Olsen, G.J.3
-
4
-
-
15644383855
-
Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: Functional analysis and comparative genomics
-
Smith, D. R., Doucette-Stamm, L. A., Deloughery, C. et al. 1997, Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: Functional analysis and comparative genomics, J. Bacteriol., 179, 7135-7155.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 7135-7155
-
-
Smith, D.R.1
Doucette-Stamm, L.A.2
Deloughery, C.3
-
5
-
-
0031458333
-
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
-
Klenk, H. P., Clayton, R. A., Tomb, J. F. et al. 1997, The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus, Nature, 390, 364-370.
-
(1997)
Nature
, vol.390
, pp. 364-370
-
-
Klenk, H.P.1
Clayton, R.A.2
Tomb, J.F.3
-
6
-
-
0041502950
-
-
a new member of the genus Sulfolobus isolated from Beppu hot springs, Japan, Extremophiles, in press
-
Suzuki, T., Iwasaki, T., Uzawa, T. et al. Sulfolobus tokodaii sp. nov. (f. Sulfolobus sp. strain7), a new member of the genus Sulfolobus isolated from Beppu hot springs, Japan, Extremophiles, in press.
-
Sulfolobus Tokodaii Sp. Nov. (F. Sulfolobus Sp. Strain7)
-
-
Suzuki, T.1
Iwasaki, T.2
Uzawa, T.3
-
7
-
-
0027514038
-
A physical map of the sulfur-dependent archaebacterium Sulfolobus acidocaldarius 7 chromosome
-
Kondo, S., Yamagishi, A., and Oshima, T. 1993, A physical map of the sulfur-dependent archaebacterium Sulfolobus acidocaldarius 7 chromosome, J. Bac., 175, 1532-1536.
-
(1993)
J. Bac.
, vol.175
, pp. 1532-1536
-
-
Kondo, S.1
Yamagishi, A.2
Oshima, T.3
-
8
-
-
0031955518
-
Base-calling of automated sequencer traces using Phred. I. Accuracy assessment
-
Ewing, B., Hillier, L., Wendl, M. C., and Green, P. 1998, Base-calling of automated sequencer traces using Phred. I. Accuracy assessment, Genome Res., 8, 175-185.
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
9
-
-
0031978181
-
Base-calling of automated sequencer traces using Phred. II. Error probabilities
-
Ewing, B. and Green, P. 1998, Base-calling of automated sequencer traces using Phred. II. Error probabilities, Genome Res., 8, 186-194.
-
(1998)
Genome Res.
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
10
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., Abajian, C., and Green, P. 1998, Consed: A graphical tool for sequence finishing, Genome Res., 8, 195-202.
-
(1998)
Genome Res.
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
11
-
-
0015275944
-
Sulfolobus: A new genus of sulfur-oxidizing bacteria living at low pH and high temperature
-
Brock, T. D., Brock, K. M., Belly, R. T., and Weiss, R. L. 1972, Sulfolobus: A new genus of sulfur-oxidizing bacteria living at low pH and high temperature, Arch. Mikrobiol., 84, 54-68.
-
(1972)
Arch. Mikrobiol.
, vol.84
, pp. 54-68
-
-
Brock, T.D.1
Brock, K.M.2
Belly, R.T.3
Weiss, R.L.4
-
12
-
-
0025214481
-
Circular chromosomal DNA in the sulfur-dependent archaebacterium Sulfolobus acidocaldarius
-
Yamagishi, A. and Oshima, T. 1990, Circular chromosomal DNA in the sulfur-dependent archaebacterium Sulfolobus acidocaldarius, Nucleic Acids Res., 18, 1133-1136.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 1133-1136
-
-
Yamagishi, A.1
Oshima, T.2
-
13
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith, T. F. and Waterman, M. S. 1981, Identification of common molecular subsequences, J. Mol. Biol., 147, 195-197.
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
14
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleishmann, R. D., Adams, M. D., White, O. et al. 1995, Whole-genome random sequencing and assembly of Haemophilus influenzae Rd, Science, 269, 496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleishmann, R.D.1
Adams, M.D.2
White, O.3
-
15
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T. M. and Eddy, S. R. 1997, tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence, Nucleic Acids Res., 25, 955-964.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
16
-
-
0031301383
-
Codon-anticodon assignment and detection of codon usage trends in seven microbial genomes
-
Nakamura, Y. and Tabata, S. 1997, Codon-anticodon assignment and detection of codon usage trends in seven microbial genomes, Microbial & Comparative Genomics, 2, 299-312.
-
(1997)
Microbial & Comparative Genomics
, vol.2
, pp. 299-312
-
-
Nakamura, Y.1
Tabata, S.2
-
17
-
-
0034405429
-
Sulfolobus shibatae CCA-adding enzyme forms a tetramer upon binding two tRNA molecules: A scrunching-shuttling model of CCA specificity
-
Li, F., Wang, J., and Steitz, T. A. 2000, Sulfolobus shibatae CCA-adding enzyme forms a tetramer upon binding two tRNA molecules: A scrunching-shuttling model of CCA specificity, J. Mol. Biol., 304, 483-492.
-
(2000)
J. Mol. Biol.
, vol.304
, pp. 483-492
-
-
Li, F.1
Wang, J.2
Steitz, T.A.3
-
18
-
-
0023019585
-
Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase
-
Cudny, H., Lupski, J. R., Godson, G. N., and Deutscher, M. P. 1986, Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase, J. Biol. Chem., 261, 6444-6449.
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 6444-6449
-
-
Cudny, H.1
Lupski, J.R.2
Godson, G.N.3
Deutscher, M.P.4
-
19
-
-
0016272858
-
Transfer ribonucleic acid nucleotidyl-transferase plays an essential role in the normal growth of Escherichia coli and in the biosynthesis of some bacteriophage T4 transfer ribonucleic acids
-
Deutscher, M. P., Foulds, J., and McClain, W. H. 1974, Transfer ribonucleic acid nucleotidyl-transferase plays an essential role in the normal growth of Escherichia coli and in the biosynthesis of some bacteriophage T4 transfer ribonucleic acids, J. Biol. Chem., 249, 6696-6699.
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 6696-6699
-
-
Deutscher, M.P.1
Foulds, J.2
McClain, W.H.3
-
20
-
-
0023394389
-
tRNA nucleotidyl-transferase is not essential for Escherichia coli viability
-
Zhu, L. and Deutscher, P. M. 1987, tRNA nucleotidyl-transferase is not essential for Escherichia coli viability, EMBO J., 6, 2473-2477.
-
(1987)
EMBO J.
, vol.6
, pp. 2473-2477
-
-
Zhu, L.1
Deutscher, P.M.2
-
21
-
-
0025130559
-
Isolation of a temperature-sensitive mutant with altered tRNA nucleotidyltransferase and cloning of the gene encoding tRNA nucleotidyltransferase in the yeast Saccharomyces cerevisiae
-
Aebi, M., Kirchner, G., Chen, J.-Y., Vijayraghavan, U., Jacobson, A., Martin, N. C., and Abelson, J. 1990, Isolation of a temperature-sensitive mutant with altered tRNA nucleotidyltransferase and cloning of the gene encoding tRNA nucleotidyltransferase in the yeast Saccharomyces cerevisiae, J. Biol. Chem., 265, 16216-16220.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 16216-16220
-
-
Aebi, M.1
Kirchner, G.2
Chen, J.-Y.3
Vijayraghavan, U.4
Jacobson, A.5
Martin, N.C.6
Abelson, J.7
-
22
-
-
0030613553
-
Gln amidotransferase: A novel heterotropic enzyme required for correct decoding of glutamine codons during translation
-
Gln amidotransferase: A novel heterotropic enzyme required for correct decoding of glutamine codons during translation, Proc. Natl. Acad. Sci. USA, 94, 11819-11826.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 11819-11826
-
-
Curnow, A.W.1
Hong, K.W.2
Yuan, R.3
Kim, S.I.4
Martins, O.5
Winkler, W.6
Henkin, T.M.7
Söll, D.8
-
23
-
-
0032573080
-
Gln amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis
-
Gln amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis, Proc. Natl. Acad. Sci. USA, 95, 12838-12843.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12838-12843
-
-
Curnow, A.W.1
Tumbula, D.L.2
Pelaschier, J.T.3
Kin, B.4
Söll, D.5
-
24
-
-
0029784085
-
2-Oxoacid:Ferredoxin oxidoreductase from the thermoacidophilic archaeon, Sulfolobus sp. Strain7
-
Zhang, Q., Iwasaki, T., Wakagi, T., and Oshima, T. 1996, 2-Oxoacid:Ferredoxin oxidoreductase from the thermoacidophilic archaeon, Sulfolobus sp. Strain7, J. Biochem., 120, 587-599.
-
(1996)
J. Biochem.
, vol.120
, pp. 587-599
-
-
Zhang, Q.1
Iwasaki, T.2
Wakagi, T.3
Oshima, T.4
-
25
-
-
0029128732
-
A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating
-
Schleper, C., Horz, I., Janekovic, D., Murphy, J., and Zillig, W. 1995, A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating, J. Bacteriol., 177, 4417-4426.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4417-4426
-
-
Schleper, C.1
Horz, I.2
Janekovic, D.3
Murphy, J.4
Zillig, W.5
-
26
-
-
0032213855
-
Genetic profile of pNOB8 from Sulfolobus: The first conjugative plasmid from an archaeon
-
She, Q., Phan, H., Garrett, R. A., Albers, S. V., Stedman, K. M., and Zilling, W. 1998, Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeon, Extremophiles, 2, 417-425.
-
(1998)
Extremophiles
, vol.2
, pp. 417-425
-
-
She, Q.1
Phan, H.2
Garrett, R.A.3
Albers, S.V.4
Stedman, K.M.5
Zilling, W.6
-
27
-
-
0034602365
-
Evolution of the family of pRN plasmids and their integrase-mediated insertion into chromosome of the crenarchaeon Sulfolobus solfataricus
-
Peng, X., Holz, I., Zilling, W., Garrett, R. A., and She, Q. 2000, Evolution of the family of pRN plasmids and their integrase-mediated insertion into chromosome of the crenarchaeon Sulfolobus solfataricus, J. Mol. Biol., 303, 449-454.
-
(2000)
J. Mol. Biol.
, vol.303
, pp. 449-454
-
-
Peng, X.1
Holz, I.2
Zilling, W.3
Garrett, R.A.4
She, Q.5
-
28
-
-
0026774220
-
The particle SVV1 from the extremely thermophilic archaeon Sulfolobus is a virus: Demonstration of infectivity and of transfection with viral DNA
-
Schleper, C., Kubo, K., and Zilling, W. 1992, The particle SVV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA, Proc. Natl. Acad. Sci. USA, 89, 7645-7649.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 7645-7649
-
-
Schleper, C.1
Kubo, K.2
Zilling, W.3
-
29
-
-
0032800014
-
A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases
-
Makarova, K. S., Aravind, L., and Koonin, E. V. 1999, A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases, Protein Sci., 8, 1714-1719.
-
(1999)
Protein Sci.
, vol.8
, pp. 1714-1719
-
-
Makarova, K.S.1
Aravind, L.2
Koonin, E.V.3
-
30
-
-
0032863453
-
DNA repair systems in archaea: Mementos from the last universal common ancestor?
-
DiRuggiero, J., Brown, J. R., Bogert, A. P., and Robb, F. T. 1999, DNA repair systems in archaea: mementos from the last universal common ancestor?, J. Mol. Envol., 49, 474-484.
-
(1999)
J. Mol. Envol.
, vol.49
, pp. 474-484
-
-
DiRuggiero, J.1
Brown, J.R.2
Bogert, A.P.3
Robb, F.T.4
-
31
-
-
0033616714
-
Horizontal gene transfer among genomes: The complexity hypothesis
-
Jain, R., Rivera, M. C., and Lake, J. A. 1999, Horizontal gene transfer among genomes: the complexity hypothesis, Proc. Natl. Acad. Sci. USA, 96, 3801-3806.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3801-3806
-
-
Jain, R.1
Rivera, M.C.2
Lake, J.A.3
-
32
-
-
0024278531
-
The membrane-associated ATPase from Sulfolobus acidocaldarius is distantly related to F1-ATPase as assessed from the primary structure of its a-subunit
-
Denda, K., Konishi, J., Oshima, T., Date, T., and Yoshida, M. 1988, The membrane-associated ATPase from Sulfolobus acidocaldarius is distantly related to F1-ATPase as assessed from the primary structure of its a-subunit, J. Biol. Chem., 263, 6012-6015.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 6012-6015
-
-
Denda, K.1
Konishi, J.2
Oshima, T.3
Date, T.4
Yoshida, M.5
-
33
-
-
0024297266
-
Molecular cloning of the b-subunit of a possible non-FOF1 type ATP synthase from the acidothermophilic archaebacterium, Sulfolobus acidocaldarius
-
Denda, K., Konishi, J., Oshima, T., Date, T., and Yoshida, M. 1988, Molecular cloning of the b-subunit of a possible non-FOF1 type ATP synthase from the acidothermophilic archaebacterium, Sulfolobus acidocaldarius, J. Biol. Chem., 263, 17251-17254.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 17251-17254
-
-
Denda, K.1
Konishi, J.2
Oshima, T.3
Date, T.4
Yoshida, M.5
-
34
-
-
0024961968
-
A gene encoding the proteolipid subunit of Sulfolobus acidocaldarius ATPase complex
-
Denda, K., Konishi, J., Oshima, T., Date, T., and Yoshida, M. 1989, A gene encoding the proteolipid subunit of Sulfolobus acidocaldarius ATPase complex, J. Biol. Chem., 264, 7119-7121.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 7119-7121
-
-
Denda, K.1
Konishi, J.2
Oshima, T.3
Date, T.4
Yoshida, M.5
-
35
-
-
0025630750
-
Structure of an ATPase operon of an acidothermophilic archaebacterium, Sulfolobus acidocaldarius
-
Denda, K., Konishi, J., Hajiro, K., Oshima, T., Date, T., and Yoshida, M. 1990, Structure of an ATPase operon of an acidothermophilic archaebacterium, Sulfolobus acidocaldarius, J. Biol. Chem., 265, 21509-21513.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 21509-21513
-
-
Denda, K.1
Konishi, J.2
Hajiro, K.3
Oshima, T.4
Date, T.5
Yoshida, M.6
-
36
-
-
0021756359
-
The unc operon. Nucleotide sequence, regulation and structure of ATP-synthase
-
Walker, J. E., Saraste, M., and Gay, N. J. 1984, The unc operon. Nucleotide sequence, regulation and structure of ATP-synthase, Biochem. Biophys. Acta, 768, 164-200.
-
(1984)
Biochem. Biophys. Acta
, vol.768
, pp. 164-200
-
-
Walker, J.E.1
Saraste, M.2
Gay, N.J.3
-
37
-
-
0023644688
-
The organization and sequence of the genes for ATP synthase subunits un the cyanobacterium Synechococcus 6301. Support for an endosymbiotic origin of chloroplasts
-
Cozens, A. L. and Walker, J. E. 1987, The organization and sequence of the genes for ATP synthase subunits un the cyanobacterium Synechococcus 6301. Support for an endosymbiotic origin of chloroplasts, J. Mol. Biol., 194, 359-383.
-
(1987)
J. Mol. Biol.
, vol.194
, pp. 359-383
-
-
Cozens, A.L.1
Walker, J.E.2
-
38
-
-
0025240361
-
+-translocating adenosine triphosphatase from vacuolar membranes of Saccharomyces cerevisiae
-
+-translocating adenosine triphosphatase from vacuolar membranes of Saccharomyces cerevisiae, J. Biol. Chem., 265, 6726-6733.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 6726-6733
-
-
Hirata, R.1
Ohsumi, Y.2
Nakano, A.3
Kawasaki, H.4
Suzuki, K.5
Anraku, Y.6
-
39
-
-
0025226104
-
+-adenosine triphosphatase
-
+-adenosine triphosphatase, Science, 250, 651-657.
-
(1990)
Science
, vol.250
, pp. 651-657
-
-
Kane, P.M.1
Yamashiro, C.T.2
Wolczyk, D.F.3
Neff, N.4
Goebl, M.5
Stevens, T.H.6
-
40
-
-
0032838825
-
A cambialistic SOD in a strictly aerobic hyperthermophilic archaeon, Aeropyrum pernix
-
Yamano, S., Sako, Y., Nomura, N., and Maruyama, T. 1999, A cambialistic SOD in a strictly aerobic hyperthermophilic archaeon, Aeropyrum pernix, J. Biochem. (Tokyo), 126, 218-225.
-
(1999)
J. Biochem. (Tokyo)
, vol.126
, pp. 218-225
-
-
Yamano, S.1
Sako, Y.2
Nomura, N.3
Maruyama, T.4
-
41
-
-
0033555252
-
Refined crystal structure of a superoxide dismutase from the hyperthermophilic archaeon Sulfolobus acidocaldarius at 2.2 A resolution
-
Knapp, S., Kardinahl, S., Hellgren, N., Tibbelin, G., Schafer, G., and Ladenstein, R. 1999, Refined crystal structure of a superoxide dismutase from the hyperthermophilic archaeon Sulfolobus acidocaldarius at 2.2 A resolution, J. Mol. Biol., 285, 689-702.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 689-702
-
-
Knapp, S.1
Kardinahl, S.2
Hellgren, N.3
Tibbelin, G.4
Schafer, G.5
Ladenstein, R.6
-
42
-
-
0034535450
-
The hyper-thermostable Fe-superoxide dismutase from the Archaeon Acidianus ambivalens: Characterization, recombinant expression, crystallization and effects of metal exchange
-
Kardinahl, S., Anemuller, S., and Schafer, G. 2000, The hyper-thermostable Fe-superoxide dismutase from the Archaeon Acidianus ambivalens: characterization, recombinant expression, crystallization and effects of metal exchange, Biol. Chem., 381, 1089-1101.
-
(2000)
Biol. Chem.
, vol.381
, pp. 1089-1101
-
-
Kardinahl, S.1
Anemuller, S.2
Schafer, G.3
|