Strong RNA Splicing Enhancers Identified by a Modified Method of Cycled Selection Interact with SR Protein

Journal of Biological Chemistry

Volumn 276, Issue 36, 2001, Pages 33833-33839

  Tian, Huicheng ^a,c   Kole, Ryszard ^b  

^a DUKE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^c DUKE UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; PROTEINS; RNA;

INTERNAL EXONS;

BIOCHEMISTRY;

BETA GLOBIN; CROSS LINKING REAGENT; MESSENGER RNA; NUCLEAR PROTEIN; PHOSPHOPROTEIN; RNA BINDING PROTEIN; SERINE ARGININE RICH SPLICING PROTEINS; SERINE-ARGININE-RICH SPLICING PROTEINS;

ALTERNATIVE RNA SPLICING; AMINO TERMINAL SEQUENCE; ANALYTIC METHOD; ARTICLE; ENHANCER REGION; EXON; HUMAN; HUMAN CELL; MESSENGER RNA SYNTHESIS; PRIORITY JOURNAL; PROTEIN MOTIF; PROTEIN PROTEIN INTERACTION; RECEPTOR AFFINITY; RNA SPLICING; SARCOPLASMIC RETICULUM; SPLICEOSOME; AFFINITY CHROMATOGRAPHY; BIOLOGICAL MODEL; CHEMISTRY; ESCHERICHIA COLI; GENETIC TRANSCRIPTION; HELA CELL; INTRON; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PLASMID; PROTEIN BINDING; ULTRAVIOLET RADIATION;

AMINO ACID MOTIFS; BASE SEQUENCE; CHROMATOGRAPHY, AFFINITY; CROSS-LINKING REAGENTS; ENHANCER ELEMENTS (GENETICS); ESCHERICHIA COLI; EXONS; HELA CELLS; HUMANS; INTRONS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PHOSPHOPROTEINS; PLASMIDS; PROTEIN BINDING; RNA SPLICING; RNA, MESSENGER; RNA-BINDING PROTEINS; TRANSCRIPTION, GENETIC; ULTRAVIOLET RAYS;

EID: 0035823483     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M102957200     Document Type: Article

References (41)

1. Dirksen, W. P., Hampson, R. K., Sun, Q., and Rottman, F. M. (1994) J. Biol. Chem. 269, 6431-6436
2. Dominski, Z., and Kole, R. (1994) J. Biol. Chem. 269, 23590-23596
3. Lavigueur, A., Branche, H. L., Kornblihtt, A. R., and Chabot, B. (1993) Genes Dev. 7, 2405-2417
4. Lynch, K. W., and Maniatis, T. (1995) Genes Dev. 9, 284-293
5. Selvakumar, M., and Helfman, D. M. (1999) RNA 5, 378-394
6. Sun, Q., Mayeda, A., Hampson, R. K., Krainer, A. R., and Rottman, F. M. (1993) Genes Dev. 7, 2598-2608
7. Tacke, R., and Manley, J. L. (1995) EMBO J. 14, 3540-3551
8. Tanaka, K., Watakabe, A., and Shimura, Y. (1994) Mol. Cell. Biol. 14, 1347-1354
9. Tian, H., and Kole, R. (1995) Mol. Cell. Biol. 15, 6291-6298
10. Watakabe A., Tanaka, K., and Shimura, Y. (1993) Genes Dev. 7, 407-418
11. Amrein, H., Hedley, M. L., and Maniatis, T. (1994) Cell 76, 735-746
12. Staknis, D., and Reed, R. (1994) Mol. Cell. Biol. 14, 7670-7682
13. Tian, M., and Maniatis, T. (1992) Science 256, 237-240
14. Tian, M., and Maniatis, T. (1993) Cell 74, 105-114
15. Fu, X. D. (1995) RNA 1, 663-680
16. Tacke, R., and Manley, J. L. (1999) Curr. Opin. Cell Biol. 11, 358-362
17. Wang, Z., Hoffman, H. M., and Grabowski, P. J. (1995) RNA 1, 21-35
18. Wu, J. Y., and Maniatis T. (1993) Cell 75, 1061-1070
19. Zuo, P., and Maniatis, T. (1996) Genes Dev. 10, 1356-1368
20. Côté, J., Simard, M. J., and Chabot, B. (1999) Nucleic Acids Res. 27, 2529-2537
21. Zahler, A. M., and Roth, M. B. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 2642-2646
22. Fu, X. D., and Maniatis, T. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 1725-1729
23. Hoffman, B. E., and Grabowski, P. J. (1992) Genes Dev. 6, 2554-2568
24. Kuo, H. C., Nasim, F. H., and Grabowski, P. J. (1991) Science 251, 1045-1050
25. Coulter, L. R., Landree, M. A., and Cooper, T. A. (1997) Mol. Cell. Biol. 17, 2143-2150
26. Schaal, T. D., and Maniatis, T. (1999) Mol. Cell. Biol. 19, 1705-1719
27. Tacke, R., Tohyama, M., Ogawa, S., and Manley, J. L. (1998) Cell 93, 139-148
28. Cavaloc, Y., Bourgeois, C. F., Kister, L., and Stevenin, J. (1999) RNA 5, 468-483
29. Konarska, M. M., Padgett, R. A., and Sharp, P. A. (1984) Cell 38, 731-736
30. Dignam, J. D., Lebovitz, R. M., and Roeder, R. G. (1983) Nucleic Acids Res. 11, 1475-1489
31. Krainer, A. R. T., Maniatis, T., Ruskin, B., and Green, M. R. (1984) Cell 36, 993-1005
32. Xu, R., Teng, J., and Cooper, T. (1993) Mol. Cell. Biol. 13, 3660-3674
33. Wong, I., and Lohman, T. M. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 5428-5432
34. Ekland, E. H., Szostak, J. W., and Bartel, D. P. (1995) Science 269, 364-370
35. Ellington, A. D., and Szostak, J. W. (1990) Nature 346, 818-822
36. Tsang, J., and Joyce, G. F. (1994) Biochemistry 33, 5966-5973
37. Tuerk, C., and Gold, L. (1990) Science 249, 505-510
38. Liu, H. X., Zhang, M., and Krainer, A. R. (1998) Genes Dev. 12, 1998-2012
39. Amendt, B. A., Si, Z. H., and Stoltzfus, C. M. (1995) Mol. Cell. Biol. 15, 4606-4615
40. McNally, L. M., and McNally, M. T. (1996) J. Virol. 70, 1163-1172
41. Nemeroff, M. E., Utans, U., Kramer, A., and Krug, R. M. (1992) Mol. Cell. Biol. 12, 962-970