Processing and evaluation of predictions in CASP4

Proteins: Structure, Function and Genetics

Volumn 45, Issue SUPPL. 5, 2001, Pages 13-21

  Zemla, Adam ^a   Venclovas, Česlovas ^a,c   Moult, John ^b   Fidelis, Krzysztof ^a  

^a LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF MARYLAND BIOTECHNOLOGY INSTITUTE   (United States)

^c VILNIUS UNIVERSITY   (Lithuania)

Author keywords

CASP4; Evaluation methods; Protein structure prediction

Indexed keywords

PROTEIN;

ARTICLE; AUTOMATION; EVALUATION; MODEL; PREDICTION; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; CHEMICAL STRUCTURE; INTERNET; METHODOLOGY; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

AUTOMATION; CRYSTALLOGRAPHY, X-RAY; INTERNET; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RESEARCH DESIGN;

EID: 0035703310     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/prot.10052     Document Type: Article

References (13)

1. Protein structure comparison by alignment of distance matrices
2. Optimum superimposition of protein structures: Ambiguities and implications
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4. Automated large scale evaluation of protein structure predictions
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6. Assessment of the CASP4 fold recognition category
7. RMS/coverage graphs: A qualitative method for comparing three-dimensional protein structure predictions
8. RASMOL: Biomolecular graphics for all
9. Criteria for evaluating protein structures derived from comparative modeling
10. Numerical criteria for the evaluation of ab initio predictions of protein structure
11. A deeply knotted protein structure and how it might fold
12. A modified definition of Sov, a segment-based measure for protein secondary structure prediction assessment