Pex, analytical tools for PDB files. I. GF-Pex: Basic file to describe a protein

Proteins: Structure, Function and Genetics

Volumn 43, Issue 1, 2001, Pages 28-36

  Thomas, Annick ^a,b   Bouffioux, Olivier ^b   Geeurickx, Dominique ^b   Brasseur, Robert ^a  

^a INSERM   (France)

^b UNIVERSITY OF LIÈGE   (Belgium)

Author keywords

Bond lengths; Dihedral angles; H bonds; Protein structure; Secondary structures

Indexed keywords

PROTEIN;

ANALYTIC METHOD; ARTICLE; CHEMICAL BOND; COVALENT BOND; GEOMETRY; HYDROGEN BOND; MOLECULAR INTERACTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

ALGORITHMS; AMINO ACIDS; HYDROGEN BONDING; MOLECULAR STRUCTURE; PROTEIN CONFORMATION; PROTEINS; SOFTWARE;

EID: 0035314074     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/1097-0134(20010401)43:1<28::AID-PROT1014>3.0.CO;2-M     Document Type: Article

References (11)

1. Novel knowledge-based mean force potential at atomic level
2. Assessing protein structures with a non-local atomic interaction energy
3. Protein data bank: A computer-based archival file for macromolecular structures
4. Enlarged representative set of protein structures
5. Selection of representative protein data sets
6. RMS/coverage graphs: A qualitative method for comparing three-dimensional protein structure predictions
7. The building blocks
8. Stability of α-helices
9. LINUS: A hierarchical procedure to predict the fold of a protein
10. A fast method to predict protein interaction sites from sequences