Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response

Journal of Bacteriology

Volumn 183, Issue 7, 2001, Pages 2178-2186

  Arnold, C N ^a   McElhanon, J ^a   Lee, A ^a   Leonhart, R ^a   Siegele, D A ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID; BUTYRIC ACID; HYBRID PROTEIN; PROPIONIC ACID; SHORT CHAIN FATTY ACID; SIGMA FACTOR; SODIUM CHLORIDE;

ARTICLE; CULTURE MEDIUM; ESCHERICHIA COLI; ESCHERICHIA COLI O157; GENE DISRUPTION; GENE EXPRESSION; GENETIC TRANSCRIPTION; GROWTH CURVE; NONHUMAN; PH; PRIORITY JOURNAL; PROTEIN EXPRESSION; REGULON; SALMONELLA ENTERICA; SALMONELLA TYPHIMURIUM;

BACTERIAL PROTEINS; ESCHERICHIA COLI; GENE EXPRESSION; HEAT; HYDROGEN-ION CONCENTRATION; OPEN READING FRAMES; OXIDATIVE STRESS; SIGMA FACTOR; SODIUM ACETATE; SODIUM CHLORIDE;

ESCHERICHIA COLI; NEGIBACTERIA; SALMONELLA ENTERICA; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; SALMONELLA TYPHIMURIUM; TYPHIMURIUM;

EID: 0035088098     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.183.7.2178-2186.2001     Document Type: Article

References (59)

1. A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli
2. S in stationary phase
3. Global gene expression profiling in Escherichia coli K12: The effects of integration host factor
4. 70 in the absence of the nucleoid-associated protein H-NS
5. The acid tolerance response of Salmonella typhimurium provides protection against organic acids
6. Linkage map of Escherichia coli K-12, edition 10: The traditional map
7. 70
8. Modulation of chemical composition and other parameters of the cell by growth rate
9. Acid habituation of Escherichia coli and the potential role of cyclopropane fatty acids in low pH tolerance
10. Control of acid resistance in Escherichia coli
11. Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli
12. Organic acids: Chemistry, antibacterial activity and practical applications
13. rpoS regulation of acid, heat, and salt tolerance in Escherichia coli O157:H7
14. Short chain fatty acids in human large intestine, portal, hepatic and venous blood
15. The response to stationary-phase stress conditions in Escherichia coli: Role and regulation of the glutamic acid decarboxylase system
16. Exploring the metabolic and genetic control of gene expression on a genomic scale
17. Adaptive acidification tolerance response of Salmonella typhimurium
18. HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteria
19. Habituation to normally lethal acidity by prior growth of Escherichia coli at a sub-lethal acid pH value
20. Cyclopropane ring formation in membrane lipids of bacteria
21. The survival benefit of short-chain organic acids and the inducible argininc and lysine decarboxylase genes for Escherichia coli
22. Molecular responses of microbes to environmental pH stress
23. Interplay of global regulators and cell physiology in the general stress response of Escherichia coli
24. Regulation of gene expression during entry into stationary phase
25. A glutamate-dependent acid resistance gene in Escherichia coli
26. The transcriptional program in the response of human fibroblasts to serum
27. Induction of acid resistance of Salmonella typhimurium by exposure to short-chain fatty acids
28. S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability
29. Identification of a central regulator of stationary-phase gene expression in Escherichia coli
30. S (RpoS) is required for a sustained acid tolerance response in virulent Salmonella typhimurium
31. Acid adaptation induces cross-protection against environmental stresses in Salmonella typhimurium
32. Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli
33. Mechanisms of acid resistance in enterohemorrhagic Escherichia coli
34. S (KatF) in bacterial global regulation
35. 38-dependent expression of a core Escherichia coli starvation gene, pexB
36. Hfr strains of Escherichia coli K-12
37. The yeast Saccharomyces cerevisiae contains two glutaredoxin genes that are required for protection against reactive oxygen species
38. Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps
39. Regulation of expression of the adhE gene, encoding the ethanol oxidoreductase in Escherichia coli: Transcription from a downstream promoter and regulation by Fnr and RpoS
40. s subunit of RNA polymerase in Escherichia coli
41. Genome-wide expression profiling in Escherichia coli K-12
42. Protein evolution viewed through Escherichia coli protein sequences: Introducing the notion of a structural segment of homology, the module
43. Escherichia coli gene products: Physiological functions and common ancestries
44. Grx5 glutaredoxin plays a central role in protection against protein oxidative damage in Saccharomyces cerevisiae
45. Perturbation of anion balance during inhibition of growth of Escherichia coli by weak acids
46. The effects of fermentation acids on bacterial growth
47. The effect of food preservatives on pH homeostasis in Escherichia coli
48. In vitro synthesis of bacteriophage lysozyme
49. Regulation of katF and katE in Escherichia coli K-12 by weak acids
50. Acid and base resistance in Escherichia coli and Shigella flexneri: Role of rpoS and growth pH
51. Acid stress, anaerobiosis, and gadCB: Lessons from Lactococcus lactis and Escherichia coli
52. Functional genomics: Expression analysis of Escherichia coli growing on minimal and rich media
53. Cloning, overexpression, and characterization of glutaredoxin 2, an atypical glutaredoxin from Escherichia coli
54. The growth phase-dependent synthesis of cyclopropane fatty acids in Escherichia coli is the result of an RpoS (KatF)-dependent promoter plus enzyme instability
55. s-dependent genes associated with the stationary-phase acid-resistance phenotype of Shigella flexneri
56. Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization
57. Physical map location of a set of Escherichia coli genes (hde) whose expression is affected by the nucleoid protein H-NS
58. Function of the Escherichia coli nucleoid protein, H-NS: Molecular analysis of a subset of proteins whose expression is enhanced in an hns deletion mutant