-
1
-
-
0025878149
-
Amino acid substitution matrices from an information theoretic perspective
-
Altschul S. F. Amino acid substitution matrices from an information theoretic perspective. J. Mol. Biol. 219:1991;555-565.
-
(1991)
J. Mol. Biol
, vol.219
, pp. 555-565
-
-
Altschul, S.F.1
-
2
-
-
0029916911
-
The SWISS-PROT protein sequence data bank and its new supplement TREMBL
-
Bairoch A., Apweiler R. The SWISS-PROT protein sequence data bank and its new supplement TREMBL. Nucl. Acids Res. 24:1996;21-25.
-
(1996)
Nucl. Acids Res.
, vol.24
, pp. 21-25
-
-
Bairoch, A.1
Apweiler, R.2
-
3
-
-
0001769249
-
Periplasmic binding protein-dependent ABC transporter
-
Washington, D.C.: ASM Press
-
Boos W., Lucht J. M. Periplasmic binding protein-dependent ABC transporter. Escherichia coliSalmonella. 1996;ASM Press, Washington, D.C.
-
(1996)
Escherichia ColiSalmonella
-
-
Boos, W.1
Lucht, J.M.2
-
5
-
-
16044367245
-
Complete genome sequence of the methanogenic archaeon,Methanococcus jannaschii
-
Bult C. J., White O., Olsen G. J., Zhou L., Fleischmann R. D., Sutton G. G., Blake J. A., Fitzgerald L. M., Clayton R. A., Gocayne J. D., Kerlavage A. R., Dougherty B. A., Tomb J. F., Adams M. D., Reich C. I., Overbeek R., Kirkness E. F., Weinstock K. G., Merrick J. M., Glodek A., Scott J. L., Geoghagen N. S. M., Weidman J. F., Fuhrmann J. L., Nguyen D., Utterback T. R., Kelley J. M., Peterson J. D., Sadow P. W., Hanna M. C., Cotton M. D., Roberts K. M., Hurst M. A., Kaine B. P., Borodovsky M., Klenk H. P., Fraser C. M., Smith H. O., Woese C. R., Venter J. C. Complete genome sequence of the methanogenic archaeon,Methanococcus jannaschii. Science. 273:1996;1043-1045.
-
(1996)
Science
, vol.273
, pp. 1043-1045
-
-
Bult, C.J.1
White, O.2
Olsen, G.J.3
Zhou, L.4
Fleischmann, R.D.5
Sutton, G.G.6
Blake, J.A.7
Fitzgerald, L.M.8
Clayton, R.A.9
Gocayne, J.D.10
Kerlavage, A.R.11
Dougherty, B.A.12
Tomb, J.F.13
Adams, M.D.14
Reich, C.I.15
Overbeek, R.16
Kirkness, E.F.17
Weinstock, K.G.18
Merrick, J.M.19
Glodek, A.20
Scott, J.L.21
Geoghagen, N.S.M.22
Weidman, J.F.23
Fuhrmann, J.L.24
Nguyen, D.25
Utterback, T.R.26
Kelley, J.M.27
Peterson, J.D.28
Sadow, P.W.29
Hanna, M.C.30
Cotton, M.D.31
Roberts, K.M.32
Hurst, M.A.33
Kaine, B.P.34
Borodovsky, M.35
Klenk, H.P.36
Fraser, C.M.37
Smith, H.O.38
Woese, C.R.39
Venter, J.C.40
more..
-
6
-
-
0011203630
-
Evolution of bacterial alcohol metabolism
-
R.P. Mortlock. Boca Raton: CRC Press
-
Clark D. P. Evolution of bacterial alcohol metabolism. Mortlock R. P. The Evolution of Metabolic Function. 1992;CRC Press, Boca Raton.
-
(1992)
The Evolution of Metabolic Function
-
-
Clark, D.P.1
-
7
-
-
0024444329
-
Evolution of a biosynthetic pathway: The tryptophan paradigm
-
Crawford I. P. Evolution of a biosynthetic pathway: the tryptophan paradigm. Annu. Rev. Microbiol. 43:1989;567-600.
-
(1989)
Annu. Rev. Microbiol
, vol.43
, pp. 567-600
-
-
Crawford, I.P.1
-
8
-
-
0000228203
-
A model of evolutionary change in proteins
-
M.O. Dayhoff. Washington, DC: National Biomedical Research Foundation
-
Dayhoff M. O., Schwartz R. M., Orcutt B. C. A model of evolutionary change in proteins. Dayhoff M. O. Atlas of Protein Sequence and Structure. 1978;National Biomedical Research Foundation, Washington, DC.
-
(1978)
Atlas of Protein Sequence and Structure
-
-
Dayhoff, M.O.1
Schwartz, R.M.2
Orcutt, B.C.3
-
9
-
-
0014800108
-
Distinguishing homologous from analogous proteins
-
Fitch W. D. Distinguishing homologous from analogous proteins. Systematic Zool. 19:1970;99-113.
-
(1970)
Systematic Zool.
, vol.19
, pp. 99-113
-
-
Fitch, W.D.1
-
10
-
-
0029653518
-
Whole-genome random sequencing and assembly ofHaemophilus influenzae
-
Fleischmann R. D., Adams M. D., White O., Clayton R. A., Kirkness E. F., Kerlavage A. R., Bult C. J., Tomb J. F., Dougherty B. A., Merrick J. M., McKenney K., Sutton G., Fitzhugh W., Fields C., Gocayne J. D., Scott J., Shirley R., Liu L. I., Glodek A., Kelley J. M., Weidman J. F., Phillips C. A., Spriggs T., Hedblom M, E., Cotton M. D., Utterback T. R., Hanna M. C., Nguyen D. T., Saudek D. M., Brandon R. C., Fine L. D., Fritchman J. L., Fuhrman J. L., Geoghagen N. S. M., Gnehm C. L., McDonald L. A., Small K. V., Fraser C. M., Smith H. O., Venter J. C. Whole-genome random sequencing and assembly ofHaemophilus influenzae. Science. 269:1995;496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kerlavage, A.R.6
Bult, C.J.7
Tomb, J.F.8
Dougherty, B.A.9
Merrick, J.M.10
McKenney, K.11
Sutton, G.12
Fitzhugh, W.13
Fields, C.14
Gocayne, J.D.15
Scott, J.16
Shirley, R.17
Liu, L.I.18
Glodek, A.19
Kelley, J.M.20
Weidman, J.F.21
Phillips, C.A.22
Spriggs, T.23
Hedblom, M.E.24
Cotton, M.D.25
Utterback, T.R.26
Hanna, M.C.27
Nguyen, D.T.28
Saudek, D.M.29
Brandon, R.C.30
Fine, L.D.31
Fritchman, J.L.32
Fuhrman, J.L.33
Geoghagen, N.S.M.34
Gnehm, C.L.35
McDonald, L.A.36
Small, K.V.37
Fraser, C.M.38
Smith, H.O.39
Venter, J.C.40
more..
-
11
-
-
0011175234
-
Yeast functional analysis reports. Multidrug-resistant transport proteins in yeast: Complete inventory and phylogenetic characterization of yeast open reading frames within the major facilitator superfamily
-
Goffeau A., Park J., Paulsen J. T., Jonnlaux J. L., Dinh T., Mordant P., Saier M. H. Yeast functional analysis reports. Multidrug-resistant transport proteins in yeast: Complete inventory and phylogenetic characterization of yeast open reading frames within the major facilitator superfamily. Yeast. 12:1996;in the press.
-
(1996)
Yeast
, vol.12
-
-
Goffeau, A.1
Park, J.2
Paulsen, J.T.3
Jonnlaux, J.L.4
Dinh, T.5
Mordant, P.6
Saier, M.H.7
-
12
-
-
0026656815
-
Exhaustive matching of the entire protein sequence database
-
Gonnet G. H., Cohen M. A., Benner S. A. Exhaustive matching of the entire protein sequence database. Science. 256:1992;1443-1445.
-
(1992)
Science
, vol.256
, pp. 1443-1445
-
-
Gonnet, G.H.1
Cohen, M.A.2
Benner, S.A.3
-
14
-
-
0029785147
-
Mapping the protein universe
-
Holm L., Sander C. Mapping the protein universe. Science. 273:1996;595-602.
-
(1996)
Science
, vol.273
, pp. 595-602
-
-
Holm, L.1
Sander, C.2
-
15
-
-
0017272554
-
Enzyme recruitment in evolution of new function
-
Jensen R. Enzyme recruitment in evolution of new function. Annu. Rev. Microbiol. 30:1976;409-425.
-
(1976)
Annu. Rev. Microbiol.
, vol.30
, pp. 409-425
-
-
Jensen, R.1
-
16
-
-
0027361123
-
A structural basis for sequence comparisons: An evaluation of scoring methodologies
-
Johnson M. S., Overington J. P. A structural basis for sequence comparisons: An evaluation of scoring methodologies. J. Mol. Biol. 233:1993;716-738.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 716-738
-
-
Johnson, M.S.1
Overington, J.P.2
-
19
-
-
0028929984
-
Widespread protein sequence similarities: Origins of E. coli
-
Labedan B., Riley M. Widespread protein sequence similarities: Origins ofE. coli. J. Bacteriol. 177:1995;1585-1588.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1585-1588
-
-
Labedan, B.1
Riley, M.2
-
20
-
-
0028802662
-
Gene products ofEscherichia coli
-
Labedan B., Riley M. Gene products ofEscherichia coli. Mol. Biol. Evol. 12:1995b;980-987.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 980-987
-
-
Labedan, B.1
Riley, M.2
-
22
-
-
0027050193
-
Structural homology between rbs repressor and ribose binding protein implies functional similarity
-
Mauzy C. A., Hermodson M. A. Structural homology between rbs repressor and ribose binding protein implies functional similarity. Protein Sci. 1:1992;843-849.
-
(1992)
Protein Sci.
, vol.1
, pp. 843-849
-
-
Mauzy, C.A.1
Hermodson, M.A.2
-
23
-
-
0022447589
-
Evidence against use of bacterial amino acid sequence data for construction of all-inclusive phylogenetic trees
-
Meyer T. E., Cusanovich M. A., Kamen M. D. Evidence against use of bacterial amino acid sequence data for construction of all-inclusive phylogenetic trees. Proc. Natl Acad. Sci. USA. 83:1986;217-220.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 217-220
-
-
Meyer, T.E.1
Cusanovich, M.A.2
Kamen, M.D.3
-
24
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
Needleman S. B., Wunsch C. D. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol. 48:1970;443-453.
-
(1970)
J. Mol. Biol.
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
25
-
-
0003796783
-
-
Washington, DC: ASM Press
-
Neidhardt F. C., Curtiss III, R., Lin E. C. C., Ingraham J., Low K. B., Magasanik B., Reznikoff W., Riley M., Schaechter M., Umbarger H. E. Escherichia coli and Salmonella/Cellular and Molecular Biology. 1996;ASM Press, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella/Cellular and Molecular Biology
-
-
Neidhardt, F.C.1
Curtiss R. III2
Lin, E.C.C.3
Ingraham, J.4
Low, K.B.5
Magasanik, B.6
Reznikoff, W.7
Riley, M.8
Schaechter, M.9
Umbarger, H.E.10
-
26
-
-
0000757346
-
Regulation of gene transcription by extracellular stimuli
-
F.C. Neidhardt. Washington, DC: ASM Press
-
Ninfa A. J. Regulation of gene transcription by extracellular stimuli. Neidhardt F. C. Escherichia coli and Salmonella/ Cellular and Molecular Biology. 1996;ASM Press, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella/ Cellular and Molecular Biology
-
-
Ninfa, A.J.1
-
27
-
-
0028055018
-
The winds of (evolutionary) change: Breathing new life into microbiology
-
Olsen G. J., Woese C. R., Overbeek R. The winds of (evolutionary) change: breathing new life into microbiology. J. Bacteriol. 176:1994;1-6.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1-6
-
-
Olsen, G.J.1
Woese, C.R.2
Overbeek, R.3
-
28
-
-
0029961137
-
Evolution of transcriptional regulation system through promiscuous coupling of regulatory proteins with operons; Suggestion from protein sequence similarities inEscherichia coli
-
Otsuka J., Watanabe H., Mori K. T. Evolution of transcriptional regulation system through promiscuous coupling of regulatory proteins with operons; suggestion from protein sequence similarities inEscherichia coli. J. theor. Biol. 178:1996;183-204.
-
(1996)
J. theor. Biol.
, vol.178
, pp. 183-204
-
-
Otsuka, J.1
Watanabe, H.2
Mori, K.T.3
-
29
-
-
0027133165
-
Functions of the gene products ofEscherichia coli
-
Riley M. Functions of the gene products ofEscherichia coli. Microbiological Reviews. 57:1993;862-952.
-
(1993)
Microbiological Reviews
, vol.57
, pp. 862-952
-
-
Riley, M.1
-
31
-
-
0030309453
-
Phylogenetic Approaches to the Identification and Characterization of Protein Families and Superfamilies
-
Saier M. H. Phylogenetic Approaches to the Identification and Characterization of Protein Families and Superfamilies. Microbial. Comp. Genom. 1:1996;129-149.
-
(1996)
Microbial. Comp. Genom.
, vol.1
, pp. 129-149
-
-
Saier, M.H.1
-
32
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith T. F., Waterman M. S. Identification of common molecular subsequences. J. Mol. Biol. 147:1981;195-197.
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
33
-
-
0029046744
-
An assessment of amino acid exchange matrices in aligning protein sequences: The Twilight Zone revisited
-
Vogt G., Etzold T., Argos P. An assessment of amino acid exchange matrices in aligning protein sequences: the Twilight Zone revisited. J. Mol. Biol. 249:1995;816-831.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 816-831
-
-
Vogt, G.1
Etzold, T.2
Argos, P.3
|