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Volumn 14, Issue 2, 2001, Pages 105-113

Protein docking using continuum electrostatics and geometric fit

(8) Mandell, Jeffrey G a,b Roberts, Victoria A c Pique, Michael E c Kotlovyi, Vladimir b Mitchell, Julie C b Nelson, Erik b Tsigelny, Igor a Ten Eyck, Lynn F a,b

a UNIVERSITY OF CALIFORNIA (United States)

b UNIVERSITY OF CALIFORNIA (United States)

c SCRIPPS RESEARCH INSTITUTE (United States)

Author keywords

Convolution; Partition function; Poisson Boltzmann; Protein protein interactions; Structure prediction

Indexed keywords

PROTEIN;

ARTICLE; BINDING SITE; COMPUTER PROGRAM; CORRELATION FUNCTION; ELECTRICITY; ENERGY; PARTITION COEFFICIENT; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE;

EID: 0035040480 PISSN: 02692139 EISSN: None Source Type: Journal
DOI: 10.1093/protein/14.2.105 Document Type: Article

Times cited : (275)

References (49)

1
- 0033954256
- (2000) Nucleic Acids Res. , vol.28 , pp. 235-242
- Berman, H.M.¹ Westbrook, J.² Feng, Z.³ Gilliland, G.⁴ Bhat, T.N.⁵ Weissig, H.⁶ Shindyalov, I.N.⁷ Bourne, P.E.⁸

2
- 0030950729
- (1997) Proteins: Struct. Funct. Genet. , vol.27 , pp. 493-506
- Blom, N.S.¹ Sygusch, J.²

3
- 0028818897
- (1995) Cell , vol.83 , pp. 503-512
- Bourne, Y.¹ Taylor, P.² Marchot, P.³

4
- 0033613931
- (1999) J. Biol. Chem. , vol.274 , pp. 2963-2970
- Bourne, Y.¹ Taylor, P.² Bougis, P.E.³ Marchot, P.⁴

5
- 0032981961
- (1999) Biophys. J. , vol.76 , pp. 1166-1178
- Camacho, C.J.¹ Weng, Z.² Vajda, S.³ DeLisi, C.⁴

6
- 0034663658
- (2000) Proteins: Struct. Funct. Genet. , vol.40 , pp. 525-537
- Camacho, C.J.¹ Gatchell, D.W.² Kimura, S.R.³ Vajda, S.⁴

7
- 0026124585
- (1991) Comput. Phys. Commun. , vol.62 , pp. 187-197
- Davis, M.E.¹ Madura, J.D.² Luty, B.A.³ McCammon, J.A.⁴

8
- 0027168214
- (1993) Proteins: Struct. Funct. Genet. , vol.16 , pp. 278-292
- Fischer, D.¹ Norel, R.² Wolfson, H.³ Nussinov, R.⁴

9
- 0031565730
- (1997) J. Mol. Biol. , vol.272 , pp. 106-120
- Gabb, H.A.¹ Jackson, R.M.² Sternberg, M.J.³

10
- 33748501925
- (1996) J. Phys. Chem. , vol.100 , pp. 3868-3878
- Gabdoulline, R.R.¹ Wade, R.C.²

11
- 0023779259
- (1988) Proteins: Struct. Funct. Genet. , vol.4 , pp. 7-18
- Gilson, M.K.¹ Honig, B.²

12
- 0030010603
- (1996) Protein Sci. , vol.5 , pp. 1316-1324
- Grant, B.D.¹ Tsigelny, I.² Adams, J.A.³ Taylor, S.S.⁴

13
- 0028066542
- (1994) Protein Eng. , vol.7 , pp. 359-369
- Harrison, R.W.¹ Kourinov, I.V.² Andrews, L.C.³

14
- 0005042345
- Burnett, R.M. and Vogel, H.J. (eds). Academic Press, New York
- (1987) Biological Organization: Macromolecular Interactions at High Resolution , pp. 235-244
- Hendrickson, W.A.¹ Smith, S.L.² Royer, W.E.³

15
- 0029016182
- (1995) Science , vol.268 , pp. 1144-1149
- Honig, B.¹ Nicholls, A.²

16
- 0030028728
- (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 13-20
- Jones, S.¹ Thornton, J.M.²

17
- 0026572775
- (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 2195-2199
- Katchalski-Katzir, E.¹ Shariv, I.² Eisenstein, M.³ Friesem, A.A.⁴ Aflalo, C.⁵ Vakser, I.A.⁶

18
- 0029940017
- (1996) FEBS Lett. , vol.384 , pp. 87-91
- King, B.L.¹ Vajda, S.² DeLisi, C.³

19
- 0030043411
- (1996) Acta Crystallogr. , vol.D52 , pp. 87-92
- Le Du, M.H.¹ Housset, D.² Marchot, P.³ Bougis, P.E.⁴ Navaza, J.⁵ Fontecilla-Camps, J.C.⁶

20
- 0025146477
- (1990) J. Mol. Biol. , vol.214 , pp. 527-555
- Louie, G.V.¹ Brayer, G.D.²

21
- 0029633152
- (1995) Comput. Phys. Commun. , vol.91 , pp. 57-95
- Madura, J.D.¹

22
- 0031547966
- (1997) J. Mol. Biol. , vol.268 , pp. 570-584
- McCoy, A.J.¹ Epa, C.² Colman, P.M.³

23
- 0032670965
- Istrail, S., Pevzner, P. and Waterman, M. (eds). ACM Press, New York
- (1999) Proceedings of the Third International Conference on Computational Molecular Biology (RECOMB 99) , pp. 280-284
- Mitchell, J.C.¹ Phillips, A.T.² Rosen, B.J.³ Ten Eyck, L.F.⁴

24
- 0028934537
- (1995) Cell , vol.80 , pp. 869-878
- Mol, C.D.¹ Arvai, A.S.² Slupphaug, G.³ Kavli, B.⁴ Alseth, I.⁵ Krokan, H.E.⁶ Tainer, J.A.⁷

25
- 0029084487
- (1995) Cell , vol.82 , pp. 701-708
- Mol, C.D.¹ Arvai, A.S.² Sanderson, R.J.³ Slupphaug, G.⁴ Kavli, B.⁵ Krokan, H.E.⁶ Mosbaugh, D.W.⁷ Tainer, J.A.⁸

26
- 0026319199
- (1991) Proteins: Struct. Funct. Genet. , vol.11 , pp. 281-296
- Nicholls, A.¹ Sharp, K.² Honig, B.³

27
- 0028079323
- (1994) Protein Eng. , vol.7 , pp. 39-46
- Norel, R.¹ Fischer, D.² Wolfson, H.J.³ Nussinov, R.⁴

28
- 0027056273
- (1992) Science , vol.258 , pp. 1748-1755
- Pelletier, H.¹ Kraut, J.²

29
- 0030828982
- (1997) J. Biol. Chem. , vol.272 , pp. 23265-23277
- Radic, Z.¹ Kirchhoff, P.D.² Quinn, D.M.³ McCammon, J.A.⁴ Taylor, P.⁵

30
- 0033621360
- (1999) J. Biol. Chem. , vol.274 , pp. 38051-38060
- Roberts, V.A.¹ Pique, M.E.²

31
- 0025861597
- (1991) J. Biol. Chem. , vol.266 , pp. 13431-13441
- Roberts, V.A.¹ Freeman, H.C.² Olson, A.J.³ Tainer, J.A.⁴ Getzoff, E.D.⁵

32
- 0025785057
- (1991) J. Mol. Biol. , vol.221 , pp. 327-346
- Shoichet, B.K.¹ Kuntz, I.D.²

33
- 0026795182
- (1992) J. Biol. Chem. , vol.267 , pp. 17248-17256
- Silva, M.M.¹ Rogers, P.H.² Arnone, A.³

34
- 0000372879
- (1997) Chem. Rev. , vol.97 , pp. 1233-1250
- Stites, W.¹

35
- 13344275187
- (1996) Nature Struct. Biol. , vol.3 , pp. 233-239
- Strynadka, N.C.¹

36
- 0000496875
- (1973) Acta Crystallogr. , vol.A29 , pp. 183-191
- Ten Eyck, L.F.¹

37
- 0005093228
- Hayes, A. and Simmons, M. (eds). ACM Press, New York
- (1995) Proceedings of the 1995 ACM/IEEE Supercomputing Conference
- Ten Eyck, L.F.¹ Mandell, J.² Roberts, V.A.³ Pique, M.E.⁴

38
- 0030249098
- (1996) Biopolymers , vol.39 , pp. 353-365
- Tsigelny, I.¹ Grant, B.D.² Taylor, S.S.³ Ten Eyck, L.F.⁴

39
- 0028984540
- (1995) Protein Eng. , vol.8 , pp. 371-377
- Vakser, I.A.¹

40
- 0030248996
- (1996) Biopolymers , vol.39 , pp. 455-464
- Vakser, I.A.¹

41
- 0028575449
- (1994) Proteins: Struct. Funct. Genet. , vol.20 , pp. 320-329
- Vakser, I.A.¹ Aflalo, C.²

42
- 0033587727
- (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 8477-8482
- Vakser, I.A.¹ Matar, O.G.² Lam, C.F.³

43
- 0025334712
- (1990) Biochemistry , vol.29 , pp. 7160-7173
- Wang, J.M.¹ Mauro, M.² Edwards, S.L.³ Oatley, S.J.⁴ Fishel, L.A.⁵ Ashford, V.A.⁶ Xuong, N.H.⁷ Kraut, J.⁸

44
- 0033621332
- (1999) J. Biol. Chem. , vol.274 , pp. 38042-38050
- Wang, K.¹ Zhen, Y.² Sadoski, R.³ Grinnell, S.⁴ Geren, L.⁵ Ferguson-Miller, S.⁶ Durham, B.⁷ Millett, F.⁸

45
- 0021757436
- (1984) J. Am. Chem. Soc. , vol.106 , pp. 765-784
- Weiner, S.J.¹ Kollman, P.A.² Case, D.A.³ Singh, U.C.⁴ Ghio, C.⁵ Alagona, S.⁶ Profeta S., Jr.⁷ Weiner, J.⁸

46
- 84988053694
- (1986) J. Comput. Chem. , vol.7 , pp. 230-252
- Weiner, S.J.¹ Kollman, P.A.² Nguyen, D.T.³

47
- 0029933286
- (1996) Protein Sci. , vol.5 , pp. 614-626
- Weng, Z.¹ Vajda, S.² DeLisi, C.³

48
- 0033621394
- (1999) J. Biol. Chem. , vol.274 , pp. 38032-38041
- Zhen, Y.¹ Hoganson, C.W.² Babcock, G.T.³ Ferguson-Miller, S.⁴

49
- 0027408171
- (1993) Biochemistry , vol.32 , pp. 2154-2161
- Zheng, J.¹ Knighton, D.² Ten Eyck, L.³ Karlsson, R.⁴ Xuong, N.H.⁵ Taylor, S.S.⁶ Sowadski, J.⁷

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