Novel methods for studying lipids and lipases and their mutual interaction at interfaces. Part I. Atomic force microscopy

Biochimie

Volumn 83, Issue 5, 2001, Pages 387-397

  Balashev, Konstantin ^a   Jensen, Torben R ^b   Kjaer, Kristian ^b   Bjørnholm, Thomas ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

Atomic force microscopy; Lipase; Lipase hydrolysis and kinetics

Indexed keywords

LIPID; PHOSPHOLIPASE A2; TRIACYLGLYCEROL LIPASE;

ATOMIC FORCE MICROSCOPY; ENZYME ACTIVITY; ENZYME KINETICS; EXPERIMENT; HYDROLYSIS; IMAGING SYSTEM; LIPID BILAYER; METHODOLOGY; MOLECULAR INTERACTION; NONHUMAN; PHYSIOLOGY; PROTEIN LIPID INTERACTION; REVIEW; SCANNING PROBE MICROSCOPY; THEORY;

EID: 0035021048     PISSN: 03009084     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0300-9084(01)01264-0     Document Type: Review

References (90)

1. Peters G.H., Toxvaerd S., Larsen N.B., Bjørnholm T., Schaumburg K., Kjaer K. Structural and dynamics of lipid monolayers: implications for enzyme catalysed lipolysis. Nature Struct. Biol. 2:1995;395-401.
2. Nielsen L.K., Bjørnholm T., Mouritsen O. Fluctuations caught in the act. Nature (Lond.). 404:2000;352-352.
3. Bjørnholm T., Hassenkam T., Reitzel N. Supramolecular organization of highly conducting organic thin films by the Langmuir-Blodgett technique. J. Mat. Chem. 9:1999;1975-1990.
4. Schmid R.D., Verger R. Lipases: Interfacial enzymes with attractive applications. Angew. Chem. Int. 37:1998;1608-1633.
5. Olsen H.S., Falholt P. The role of enzymes in modern detergency. J. Surfact. Deterg. 1:1998;555-567.
6. van Ee J.H, Misset O, Baas E.J. Enzymes in detergency, Surfactant Sciences. Vol. 69:1997;Marcel Dekker Inc, New York.
7. Pockels A. Nature (Lond.). 43:1891;437-437.
8. Langmuir I. The constitution and fundamental properties of solids and liquids. II. Liquids. J. Am. Chem. Soc. 39:1917;1848-1906.
9. Langmuir I. Trans. Faraday Soc. 15:1920;62-62.
10. Jensen T.R., Kjaer K., Howes P.B., Svendsen A., Balashev K., Reitzel N., Bjørnholm T. Kokotos G, Constantinou-Kokotou V. Lipases and Lipids: Structure, function and Biotechnological Applications. 2000;127-139 Crete University Press.
11. Weygand W., Wetzer B., Pum D., Sleytr U.B., Cuvillier N., Kjaer K., Howes P., Lösche M. Bacterial S-layer protein coupling to lipids: X-ray reflectivity and grazing incidence diffraction studies. Biophys. J. 76:1999;458-468.
12. Verclas S.A.W., Howes P.B., Kjaer K., Wurlitzer A., Weygand M., Büldt G., Dencher N.A., Lösche M. X-ray diffraction from a single layer of purple membrane at the air/water interface. J. Mol. Biol. 287:1999;837-843.
13. Blodgett K.B. Monomolecular films of fatty acids on glass. J. Am. Chem. Soc. 56:1934;495-495.
14. Blodgett K.B. Films built by depositing successive monomolecular layers on a solid surface. J. Am. Chem. Soc. 57:1935;1007-1022.
15. Petty M.C. Langmuir-Blodgett films. An Introduction. 1996;Cambridge University Press.
16. Binnig G., Quate C.F., Gerber C. Atomic force microscope. Phys. Rev. Lett. 56:1986;930-933.
17. Binnig G., Rohrer H., Gerber C., Weibel E. Surface studies by scanning tunneling microscopy. Phys. Rev. Lett. 49:1982;57-61.
18. Ransac S., Ivanova M., Verger R., Panaiotov I. Monolayer techniques for studying lipase kinetics. Methods Enzymol. 286:1997;263-292.
19. Alexander S., Hellemans L., Marti O., Schneir J., Elings V., Hansma P.K., Longmire M., Gurley J. An atomic-resolution atomic-force microscope implemented using an optical lever. J. Appl. Phys. 65:1989;164-167.
20. Prater C.B., Butt H.J., Hansma P.K. Atomic force microscopy. Nature (Lond.). 345:1990;839-840.
21. Braet F., Kalle W.H., De Zanger R.B., De Grooth B.G., Raap A.K., Tanke H.J., Wisse E. Comparative atomic force and scanning electron microscopy: an investigation on fenestrated endothelial cells in vitro. J. Microsc. 181:1996;10-17.
22. Braet F., Seynaeve C., De Zanger R., Wisse E. Imaging surface and submembraneous structures with the atomic force microscope: a study on living cancer cells, fibroblasts and macrophages. J. Microsc. 190:1998;328-338.
23. Butt H.J., Wolff E.K., Gould S.A., Dixon N.B., Peterson C.M., Hansma P.K. Imaging cells with the atomic force microscope. J. Struct. Biol. 105:1990;54-61.
24. Fritz M., Radmacher M., Gaub H. Granula motion and membrane spreading during activation of human platelets imaged by atomic force microscopy. Biophys J. 66:1994;1328-1334.
25. Chang L., Kious T., Yorgancioglu M., Keller D., Pfeifer J. Cytoskeleton of living, unstained cells imaged by scanning force microscopy. Biophys. J. 64:1993;1282-1286.
26. Dvorak J.A., Nagao E. Optimization and utilization of the atomic force microscope for living systems. Scanning. 20:1998;138-139.
27. Fritz M., Radmacher M., Gaub H. Granula motion and membrane spreading during activation of human platelets imaged by atomic force microscopy. Biophys J. 66:1994;1328-1334.
28. Allen M.J., Dong X.F., O'Neill T.E., Yau P., Kowalczykowski S.C., Gatewood J., Balhorn R., Bradbury E.M. Atomic force microscope measurements of nucleosome cores assembled along defined DNA sequences. Biochemistry. 32:1993;8390-8396.
29. de Grauw C.J., Avogadro A., van den Heuvel D.J., van der Werf K.O., Otto C., Kraan Y., van Hulst N.F., Greve J. Chromatin structure in bands and interbands of polytene chromosomes imaged by atomic force microscopy. J. Struct. Biol. 121:1998;2-8.
30. Fritzsche W. Salt-dependent chromosome viscoelasticity characterized by scanning force microscopy-based volume measurements. Microsc. Res. Tech. 44:1999;357-362.
31. Fritzsche W., Henderson E. Scanning force microscopy reveals ellipsoid shape of chicken erythrocyte nucleosomes. Biophys. J. 71:1996;2222-2226.
32. Fritzsche W., Vesenka J., Henderson E. Scanning force microscopy of chromatin. Scanning Microsc. 9:1995;729-739.
33. Yang G., Leuba S.H., Bustamante C., Zlatanova J., van Holde K. Role of linker histones in extended chromatin fibre structure. Struct. Biol. 1:1994;761-763.
34. Butt H.J., Downing K.H., Hansma P.K. Imaging the membrane protein bacteriorhodopsin with the atomic force microscope. Biophys. J. 58:1990;1473-1480.
35. Butt H.J., Prater C.B., Hansma P.K. Imaging purple membranes dry and in water with the atomic force microscope. J. Vac. Sci. Technol. B (Microelectronics Processing and Phenomena). 9:1991;1193-1196.
36. Hoh J.H., Lal R., John S.A., Revel J.P., Arnsdorf M.F. Atomic force microscopy and dissection of gap junctions. Science. 253:1991;1405-1408.
37. Lewis A., Rousso I., Khachatryan E., Brodsky I., Lieberman K., Sheves M. Directly probing rapid membrane protein dynamics with an atomic force microscope: a study of light-induced conformational alterations in bacteriorhodopsin. Biophys. J. 70:1996;2380-2384.
38. Müller D.J., Engel A. Voltage and pH-induced channel closure of porin OmpF visualized by atomic force microscopy. J. Mol. Biol. 285:1998;1347-1351.
39. Müller D.J., Sass H.J., Müller S.A., Büldt G., Engel A. Surface structures of native bacteriorhodopsin depend on the molecular packing arrangement in the membrane. J. Mol. Biol. 285:1999;1903-1909.
40. Müller D.J., Schabert F.A., Büldt G., Engel A. Imaging purple membranes in aqueous solutions at sub-nanometer resolution by atomic force microscopy. Biophys. J. 68:1995;1681-1686.
41. Schneider S.W., Sritharan K.C., Geibel J.P., Oberleithner H., Jena B.P. Surface dynamics in living acinar cells images by atomic force microscopy: identification of plasma membranes structures involved in exocytosis. Proc. Natl. Acad. Sci. USA. 94:1997;316-321.
42. Allen M., Balhorn R., Balooch M., Siekhaus W.J., Tench R.J., Subbiah S. Progress in DNA-imaging: double stranded multimers and bases of DNA deposited on the basal plane of graphite. AIP Conf. Proc. 241:1991;176-189.
43. Bezanilla M., Drake B., Nudler E., Kashlev M., Hansma P.K., Hansma H.G. Motion and enzymatic degradation of DNA in the atomic force microscope. Biophys. J. 67:1994;2454-2459.
44. Bezanilla M., Manne S., Laney D.E., Lyubchenko Y.L., Hansma H.G. Adsorption of DNA to mica, silylated mica and minerals: characterization by atomic force microscopy. Langmuir. 11:1995;655-659.
45. Hansma H.G., Laney D.E. DNA binding to mica correlates with cationic radius: assay by atomic force microscopy. Biophys. J. 70:1996;1933-1939.
46. Hansma H.G., Vesenka J., Siegerist C., Kelderman G., Morrett H., Sinsheimer R.L., Bustamante C., Elings V., Hansma P.K. Reproducible imaging and dissection of plasmid DNA under liquid with the atomic force microscope. Science. 256:1992;1180-1184.
47. Shlyakhtenko L.S., Gall A.A., Wiemer J.J., Hawn D.D., Lyubchenko Y.L. Atomic force microscopy imaging of DNA covalently immobilized on a functionalized mica substrate. Biophys. J. 77:1999;568-576.
48. Thomson N.H., Kasas S., Smith B., Hansma H.G., Hansma P.K. Reversible binding of DNA to mica for AFM imaging. Langmuir. 12:1996;5905-5908.
49. Valle M., Valpuesta J.M., Carrascosa J.L., Tamayo J., Garcia R. The interaction of DNA with bacteriophage phi 29 connector: a study by AFM and TEM. J. Struct. Biol. 116:1996;390-398.
50. Weisenhorn A.L., Egger M., Ohnesorge F., Gould S.A.C., Heyn S.P., Hansma H.G., Sinsheimer R.L., Gaub H.E., Hansma P.K. Molecular-resolution images of Langmuir-Blodgett films and DNA by atomic force microscopy. Langmuir. 7:1991;8-12.
51. Dorn I.T., Eschrich R., Seemuller E., Guckenberger R., Tampe R. High-resolution AFM-imaging and mechanistic analysis of the 20 S proteasome. J. Mol. Biol. 288:1999;1027-1036.
52. Edstrom R.D., Meinke M.H., Yang X.R., Yang R., Elings V., Evans D.F. Direct visualization of phosphorylase-phosphorylase kinase complexes by scanning tunneling and atomic force microscopy. Biophys. J. 58:1990;1437-1448.
53. Fotiadis D., Müller D.J., Tsiotis G., Hasler L., Tittmann P., Mini T., Jenö P., Gross H., Engel A. Surface analysis of the photosystem I complex by electron and atomic force microscopy. J. Mol. Biol. 283:1998;83-94.
54. Goldsburry C., Kistler J., Aebi U., Arvinte T., Cooper G.J. Watching amyloid fibrils grow by time-lapse atomic force microscopy. J. Mol. Biol. 285:1999;33-39.
55. Harper J.D., Wong S.S., Lieber C.M., Lansbury P.T. Assembly of Ab amyloid protofibrils: an in vitro model for a possible early event in Alzheimer's disease. Biochemistry. 38:1999;8972-8980.
56. Karrasch S., Hegerl R., Hoh J.H., Baumeister W., Engel A. Atomic force microscopy produces faithful high-resolution images of protein surfaces in an aqueous environment. Proc. Natl. Acad. Sci. USA. 91:1993;836-838.
57. McMaster T.J., Miles M.J., Walsby A.E. Direct observation of protein secondary structure in gas vesicles by atomic force microscopy. Biophys. J. 70:1996;2432-2436.
58. Möller C., Allen M., Elings V., Engel A., Müller D.J. Tapping-mode atomic microscopy produces faithful high-resolution images of protein surfaces. Biophys. J. 77:1999;1150-1158.
59. Thomson N.H., Smith B.L., Almqvist N., Schmitt L., Kashev M., Kool E.T., Hansma P.K. Oriented, active Escherichia coli RNA polymerase: an atomic force microscope study. Biophys. J. 76:1999;1024-1033.
60. Weisenhorn A.L., Drake B., Prater C.B., Gould S.A., Hansma P.K., Ohnesorge F., Egger M., Heyn S.P., Gaub H.E. Immobilized proteins in buffer imaged at molecular resolution by atomic force microscopy. Biophys. J. 58:1990;1251-1258.
61. Jandt K.D. Developments and perspectives of scanning probe microscopy (SPM) on organic materials systems. Materials Sci. Engin. R21:1998;221-295.
62. Bustamante C., Keller D. Scanning force microscopy in biology. Physics Today (December). 1995;32-38.
63. Verger R., de Haas G.H. Interfacial enzyme kinetics of lipolysis. Mullinis L.J, Hagins W.A, Stryer L, Newton C. Ann. Rev. Biophys. Bioengin. 5:1976;77-117.
64. Muller D., Engel A., Amrein M. Preparation techniques for the observation of native biological systems with the atomic force microscope. Biosensors Bioelectr. 12:1997;867-877.
65. Bustamante C., Rivetti C., Keller D. Scanning force microscopy under aqueous solutions. Curr. Opin. Struct. Biol. 7:1997;709-716.
66. Hansma H.G., Hoh J.H. Biomolecular imaging with the atomic force microscope. Annu. Rev. Biophys. Biomol. Struct. 23:1994;115-139.
67. Li M.Q. Scanning probe microscopy (STM/AFM) and applications in biology. Appl. Phys. A. 68:1999;255-258.
68. Morita S., Sugawara Y. Guidelines for the achievement of true atomic resolution with noncontact AFM. Appl. Surf. Sci. 140:1999;406-410.
69. Rugar D., Hansma P.K. Atomic force microscopy. Phys. Today. 43:1990;23-30.
70. Yang J., Tamm L.K., Somlyo A.P., Shao Z. Promises and problems of biological atomic force microscopy. J. Microsc. 171:1993;183-198.
71. Reviakine I., Brisson A. Formation of supported phospholipid bilayers from unilamellar vesicles investigated by atomic force microscopy. Langmuir. 16:2000;1473-1477.
72. Tamm L.K., McConnell H.M. Supported phospholipid bilayers. Biophys. J. 47:1985;105-113.
73. 2+ on the morphology of mixed DPPC-DOPS supported phospholipid bilayers. Langmuir. 16:2000;1806-1815.
74. Garnaes J., Larsen N.B., Bjornholm T., Jorgensen M., Kjaer K., Als Nielsen J., Jorgense J.F., Zasadzinski J.A. Langmuir-Blogett Films of a functionalized molecule with cross sectional mismatch between head and tail. Science. 264:1994;1301-1304.
75. Zasadzinski J.A., Viswanathan R., Madsen L., Garnaes J., Schwartz D.K. Langmuir-Blogett films. Science. 263:1994;1726-1733.
76. Schwartz D.K., Viswanathan R., Garnaes J., Zasadzinski J.A. Influence of cations, alkane chain length and substrate on molecular order of Langmuir-Blogett films. J. Am. Chem. Soc. 115:1993;7374-7380.
77. Schwartz D.K., Garnaes J., Viswanathan R., Zasadzinski J.A. Surface order and stability of Langmuir-Blodgett films. Science. 257:1993;508-511.
78. Garnaes J., Schwartz D.K., Viswanathan R., Zasadzinski J.A. Domain boundaries and buckling superstructures in Langmuir Blodgett films. Nature. 357:1992;54-57.
79. Hui S.W., Viswanathan R., Zasadzinski J.A., Israelachvili N. The structure and stability of phospholipid bilayers by atomic force microscopy. Biophys. J. 68:1995;171-178.
80. Cevc G., Marsh D. Phospholipid bilayers. 1987;Wiley, New York.
81. Shao Z., Yang J. Progress in high resolution atomic force microscopy. Q. Rev. Biophys. 28:1995;195-251.
82. Balashev K., Nielsen L.K., Callisen T.H., Svendsen A., Bjørnholm T. In situ studies of single enzymes and enzyme kinetics by atomic force microscopy (AFM). Probe Microscopy. 2001;. in press.
83. 2 from inflammatory exudate. Science. 250:1990;1541-1546.
84. Panaiotov I., Ivanova M., Verger R. Interfacial and temporal organization of enzymatic lipolysis. Curr. Opin. Colloid Interface Sci. 2:1997;517-525.
85. 2. Biophys. J. 74:1998;2398-2404.
86. Clausen-Schaumann H., Grandbois M., Gaub H.E. Enzyme-assisted nano-scale lithography in lipid membranes. Adv. Mat. 10:1998;949-951.
87. 2 hydrolysis of DPPC bilayers visualized by atomic force microscopy. Biochim. Biophys. Acta. 1420:1999;266-271.
88. 2 activity and dynamic lipid bilayer microheterogeneity. Biochemistry. 35:1996;9003-9006.
89. Balashev K., Nielsen L.K., Callisen T.H., Svendsen A., Bjørnholm T. Kokotos G, Constantinou-Kokotou V. Lipases and Lipids: Structure, Function and Biotechnological Applications. 2000;117-126 Crete University Press.
90. Jensen T.R., Balashev K., Bjørnholm T., Kjaer K. Novel methods for studying lipids and lipases and their mutual interaction at interfaces. Part II. Surface sensitive synchrotron X-ray scattering. Biochimie. 83:2001;399-408.