rpoB sequence analysis of cultured Tropheryma whippelii

Journal of Clinical Microbiology

Volumn 39, Issue 7, 2001, Pages 2425-2430

  Drancourt, M ^a   Carlioz, A ^a   Raoult, D ^a  

^a AIX MARSEILLE UNIVERSITY   (France)

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT; RNA POLYMERASE; RNA POLYMERASE BETA SUBUNIT; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GENE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CONTROLLED STUDY; GENETIC ANALYSIS; HUMAN; HUMAN CELL; MYCOBACTERIUM TUBERCULOSIS; MYCOPLASMA PNEUMONIAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; TROPHERYMA WHIPPELII;

ACTINOBACTERIA; CULTURE MEDIA; DNA, BACTERIAL; DNA-DIRECTED RNA POLYMERASES; GENES, BACTERIAL; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ANALYSIS, DNA; WHIPPLE DISEASE;

ACTINOBACTERIA (CLASS); ACTINOMYCES; BACTERIA (MICROORGANISMS); CORYNEBACTERINEAE; MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS; MYCOPLASMA PNEUMONIAE; PROKARYOTA; TROPHERYMA WHIPPLEI; UNCULTURED ACTINOMYCETE;

EID: 0034961601     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.39.7.2425-2430.2001     Document Type: Article

References (40)

1. Characterization of mutations in the rpoB gene that confer rifampin resistance in Staphylococcus aureus
2. Molecular characterization of rifampin-resistant Neisseria meningitidis
3. Phylogenetic classification and the universal tree
4. Characterization of mutations in the rpoB gene in naturally rifampin-resistant Rickettsia species
5. Molecular evolution of rifampin resistance in Streplococcus pneumoniae
6. Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays
7. Homogeneity of 16S-23S ribosomal intergenic spacer regions of Tropheryma whippelii in Swiss patients with Whipple's disease
8. Analysis of the actinobacterial insertion in domain III of the 23S rRNA gene of uncultured variants of the bacterium associated with Whipple's disease using broad-range and 'Tropheryma whippelii'-specific PCR
9. Detection of three different types of 'Tropheryma whippelii' directly from clinical specimens by sequencing, single-strand conformation polymorphism (SSCP) analysis and type-specific PCR of their 16S-23S ribosomal intergenic spacer region
10. Molecular basis of rifampin resistance in Mycobacterium leprae
11. Mapping and sequencing of mutations in the Escherichia coli rpoB gene that lead to rifampicin resistance
12. Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene
13. DNA-dependent RNA polymerase subunit B as a tool for phylogenetic reconstructions: Branching topology of the archaeal domain
14. Description of Tropheryma whippelii gen. nov. sp. nov., the Whipple's disease bacillus
15. Differentiation of Borrelia burgdorferi sensu lato on the basis of RNA polymerase gene (rpoB) sequences
16. Reassessment of the phylogenetic position of the bacterium associated with Whipple's disease and determination of the 16S-23S ribosomal intergenic spacer sequence
17. Environmental occurrence of the Whipple's disease bacterium (Tropheryma whippelii)
18. Organization, structure, and variability of the rRNA operon of the Whipple's disease bacterium (Tropheryma whippelii)
19. Evaluation of intraspecies genetic variation within the 60 kDa heat-shock protein gene (groEL) of Bartonella species
20. rpoB sequence as a novel basis for bacterial identification
21. Determination of Coxiella bumetii rpoB sequence and its use for phylogenetic analysis
22. Cloning and sequencing of a part of the heat shock protein 65 gene (hsp65) of Tropheryma whippelii and its use for detection of T. whippelii in clinical specimens by PCR
23. Ribosomal DNA: A key to phylogeny
24. Molecular basis of rifampin resistance in Streptococcus pneumoniae
25. TREEVIEW: An application to display phylogenetic trees on personal computers
26. Suicide amplification of the medieval black death bacillus
27. Cultivation of the bacillus of Whipple's disease
28. Identification of the uncultured bacillus of Whipple's disease
29. Determination of the rpoB gene sequences of Bartonella henselae and Bartonella quintana for phylogenic analysis
30. rpoB gene analysis as a novel strategy for identification of spirochetes from the genera Borrelia. Treponema, and Leptospira
31. Comparative sequence analysis and predicted phylogeny of the DNA-dependent RNA polymerase β subunits of Staphylococcus aureus and other bacteria
32. An improved PCR method for walking in uncloned genomic DNA
33. Diagnosis and treatment of Whipple's disease
34. Confidence in evolutionary trees from biological sequence data
35. Rifampicin resistance and mutatiou of the rpoB gene in Mycobacterium tuberculosis
36. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
37. Whipple disease: Clinical review of 52 cases
38. A hitherto undescribed disease characterized anatomically by deposits of fat and fatty acids in the intestinal anc mesenteric lymphatic tissues
39. Phylogeny of the Whipple's-disease-associated bacterium
40. Combined electron and light microscopy in Whipple's disease: Demonstration of 'bacillary bones' in the intestine