Assembly of a polytopic membrane protein structure from the solution structures of overlapping peptide fragments of bacteriorhodopsin

Biophysical Journal

Volumn 81, Issue 2, 2001, Pages 1029-1036

  Katragadda, Madan ^b   Alderfer, James L ^b   Yeagle, Philip L ^a  

^a UNIVERSITY OF CONNECTICUT   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIORHODOPSIN; MEMBRANE PROTEIN;

ARTICLE; CRYSTAL STRUCTURE; MEMBRANE STRUCTURE; NONHUMAN; PEPTIDE SYNTHESIS; PROTEIN ASSEMBLY; PROTEIN STRUCTURE; X RAY CRYSTALLOGRAPHY;

BACTERIA (MICROORGANISMS);

EID: 0034909370     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(01)75760-8     Document Type: Article

References (43)

1. The structure of a 19 residue fragment from the C loop of the fourth epidermal growth factor-like domain of thrombomodulin
2. Structural features and light-dependent changes in the sequence 306-322 extending from helix VII to the palmitoylation sites in rhodopsin: A site-directed spin-labeling study
3. Three-dimensional structure of proteolytic fragment 163-231 of bacterioopsin determined from nuclear magnetic resonance data in solution
4. A new approach to secondary structure evaluation: Secondary structure prediction of porcine adenylate kinase and yeast guanylate kinase by CD spectroscopy of overlapping synthetic peptide segments
5. Folding of protein G B1 domain studied by the conformational characterization of fragments comprising its secondary structure elements
6. A β turn is present in the 392-411 segment of the human fibrinogen γ chain: Effects of structural changes in this segment on affinity to antibody 4A5
7. Conformations of peptide fragments from the FK506 binding protein: Comparison with the native and urea-unfolded states
8. Comparison of NMR structures of the receptor binding domains of Pseudomonas aeruginosa Pili strains PAO, KB7, and PAK: Implications for receptor binding and synthetic vaccine design
9. Solution conformation preferences of immunogenic peptides derived from the principal neutralizing determinant of the HIV-1 envelope glycoprotein gp120
10. Solution structure of the sixth transmembrane helix of the G-protein coupled receptor, rhodopsin
11. Dissecting the structure of a partially folded protein
12. Structure of the membrane domain of subunit b of the Escherichia coli F0F1 ATP synthase
13. Folding of peptide fragments comprising the complete sequence of proteins
14. A peptide corresponding to residues asp177 to asn208 of human cyclin a forms an alpha helix
15. NMR solution structure of domain 1 of human annexin I shows an autonomous folding unit
16. Probing minimal independent folding units in dihydrofolate reductase by molecular dissection
17. Crystal structure of the principal neutralization site of HIV-1
18. It's not just a phase: Crystallization and x-ray structure determination of bacteriorhodopsin in lipidic cubic phases
19. NMR structure of the N-terminal SH3 domain of GRB2 and its complex with a proline-rich peptide from SOS
20. Electron-crystallographic refinement of the structure of bacteriorhodopsin
21. High helical propensity of the peptide fragments derived from β-lactoglobulin, a predominantly β-sheet protein
22. Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy
23. A biophysical study of integral membrane protein folding
24. Helicity of alpha(404-451) and beta(394-445) tubulin C-terminal recombinant peptides
25. Solution structure of the loops of bacteriorhodopsin closely resemble the crystal structure
26. A two-dimensional nuclear overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules
27. Spatial structure of (34-65)bacterioopsin polypeptide in SDS micelles determined from nuclear magnetic resonance data
28. Accurate measurements of coupling constants from two-dimensional nuclear magnetic resonance spectra of proteins and determination of phi-angles
29. Structure of bacteriorhodopsin at 1.55 angstrom resolution
30. Folding propensities of synthetic peptide fragments covering the entire sequence of phage 434 Cro protein
31. Crystal structure of rhodopsin: A G protein-coupled receptor
32. X-ray structure of bacteriorhodopsin at 2.5 angstroms from mirocrystals grown in lipidic cubic phases
33. Three-dimensional structure of (1-71)bacterioopsin solubilized in methanol/chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy
34. Helical membrane protein folding, stability, and evolution
35. Conformational analysis of peptides corresponding to all the secondary structure elements of protein L B1 domain
36. Folding propensities of peptide fragments of myoglobin
37. H-1 NMR structural studies of a cystine-linked peptide containing residues 71-93 of transthyretin and effects of a ser84 substitution implicated in familial amyloidotic polyneuropathy
38. Pseudo-structures for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton proton distance constraints with nuclear magnetic resonance
39. Free energy determinants of secondary structure formation: β turns and their role in protein folding
40. Structure and function in rhodopsin: Single cysteine substitution mutants in the cytoplasmic interhelical E-F loop region show position-specific effects in transducin activation
41. Structure of the carboxyl terminal domain of bovine rhodopsin
42. The first and second cytoplasmic loops of the G-protein receptor, rhodopsin, independently form β-turns
43. Three dimensional structure of the seventh transmembrane helical domain of the G-protein receptor, rhodopsin