Detection of recombination in DNA multiple alignments with hidden markov models

Journal of Computational Biology

Volumn 8, Issue 4, 2001, Pages 401-427

  Husmeier, D ^a   Wright, F ^a  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

Hidden Markov models; Maximum likelihood and the expectation maximization (EM) algorithm; Multiple alignments of DNA sequences; Phylogenetic trees; Recombination

Indexed keywords

DNA;

ALGORITHM; ANALYTIC METHOD; ARTICLE; BACTERIUM; BIOASSAY; CONTROLLED STUDY; DNA RECOMBINATION; DNA SEQUENCE; MOLECULAR EVOLUTION; MOSAICISM; NEISSERIA; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; PROBABILITY; QUALITY CONTROL; SIGNAL DETECTION; STRAIN DIFFERENCE; VIRUS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DNA; DNA, BACTERIAL; GENES, BACTERIAL; LIKELIHOOD FUNCTIONS; MARKOV CHAINS; MODELS, GENETIC; NEISSERIA; PHYLOGENY; RECOMBINATION, GENETIC; SEQUENCE ALIGNMENT; VARIATION (GENETICS);

BACTERIA (MICROORGANISMS); NEISSERIA;

EID: 0034791569     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/106652701752236214     Document Type: Article

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