Conserved plant genes with similarity to mammalian de novo DNA methyltransferases

Proceedings of the National Academy of Sciences of the United States of America

Volumn 97, Issue 9, 2000, Pages 4979-4984

  Cao, Xiaofeng ^a   Springer, Nathan M ^b,c   Muszynski, Michael G ^d   Phillips, Ronald L ^c   Kaeppler, Shawn ^b   Jacobsen, Steven E ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c UNIVERSITY OF MINNESOTA   (United States)

^d PIONEER HI BRED INTERNATIONAL INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA METHYLTRANSFERASE; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; PROTEASOME; UBIQUITIN;

ARABIDOPSIS; ARTICLE; CATALYSIS; DNA METHYLATION; ENZYME ACTIVITY; GENE ACTIVITY; GENETIC CONSERVATION; MAIZE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; ARABIDOPSIS; BINDING SITES; CONSERVED SEQUENCE; DNA (CYTOSINE-5-)-METHYLTRANSFERASE; GENES, PLANT; HUMANS; MAMMALS; MICE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT PROTEINS; PROTEIN CONFORMATION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; UBIQUITINS;

ANIMALIA; ARABIDOPSIS; EMBRYOPHYTA; EUKARYOTA; MAMMALIA; ZEA MAYS;

EID: 0034712867     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.97.9.4979     Document Type: Article

References (54)

1. Martienssen, R. A. & Richards, E. J. (1995) Curr. Opin. Genet. Dev. 5, 234-242.
2. Bender, J. & Fink, G. R. (1995) Cell 83, 725-734.
3. Jacobsen, S. E. & Meyerowitz, E. M. (1997) Science 277, 1100-1103.
4. Matzke, M. A. & Matzke, A. J. (1998) Cell. Mol. Life Sci. 54, 94-103.
5. Finnegan, E. J., Peacock, W. J. & Dennis, E. S. (1996) Proc. Natl. Acad. Sci. USA 93, 8449-8454.
6. Richards, E. J. (1997) Trends Genet. 13, 319-323.
7. Li, E., Beard, C. & Jaenisch, R. (1993) Nature (London) 366, 362-365.
8. Beard, C., Li, E. & Jaenisch, R. (1995) Genes Dev. 9, 2325-2334.
9. Walsh, C. P. & Bestor, T. H. (1999) Genes Dev. 13, 26-34.
10. Yoder, J. A., Walsh, C. P. & Bestor, T. H. (1997) Trends Genet. 13, 335-340.
11. Cheng, X. (1995) Annu. Rev. Biophys. Biomol. Struct. 24, 293-318.
12. Bestor, T., Laudano, A., Mattaliano, R. & Ingram, V. (1988) J. Mol. Biol. 203, 971-983.
13. Finnegan, E. J. & Dennis, E. S. (1993) Nucleic Acids Res. 21, 2383-2388.
14. Pradhan, S., Cummings, M., Roberts, R. J. & Adams, R. L. (1998) Nucleic Acids Res. 26, 1214-1222.
15. Bestor, T. H. (1992) EMBO J. 11, 2611-2617.
16. Okano, M., Xie, S. & Li, E. (1998) Nat. Genet. 19, 219-220.
17. Li, E., Bestor, T. H. & Jaenisch, R. (1992) Cell 69, 915-926.
18. Lei, H., Oh, S. P., Okano, M., Juttermann, R., Goss, K. A., Jaenisch, R. & Li, E. (1996) Development (Cambridge, U.K.) 122, 3195-3205.
19. Ronemus, M. J., Galbiati, M., Ticknor, C., Chen, J. & Dellaporta, S. L. (1996) Science 273, 654-657.
20. Jacobsen, S. E. (1999) Curr. Biol. 9, R617-R619.
21. Jacobsen, S. E., Sakai, H., Finnegan, E. J., Cao, X. & Meyerowitz, E. M. (2000) Curr. Biol. 10, 179-186.
22. Pinarbasi, E., Elliott, J. & Hornby, D. P. (1996) J. Mol. Biol. 257, 804-813.
23. Wilkinson, C. R., Bartlett, R., Nurse, P. & Bird, A. P. (1995) Nucleic Acids Res. 23, 203-210.
24. Okano, M., Xie, S. & Li, E. (1998) Nucleic Acids Res. 26, 2536-2540.
25. Yoder, J. A. & Bestor, T. H. (1998) Hum. Mol. Genet. 7, 279-284.
26. Hung, M. S., Karthikeyan, N., Huang, B., Koo, H. C., Kiger, J. & Shen, C. J. (1999) Proc. Natl. Acad. Sci. USA 96, 11940-11945.
27. Rose, T. M., Schultz, E. R., Henikoff, J. G., Pietrokovski, S., McCallum, C. M. & Henikoff, S. (1998) Nucleic Acids Res. 26, 1628-1635.
28. Henikoff, S. & Comai, L. (1998) Genetics 149, 307-318.
29. Gruenbaum, Y., Naveh-Many, T., Cedar, H. & Razin, A. (1981) Nature (London) 292, 860-862.
30. Xie, S., Wang, Z., Okano, M., Nogami, M., Li, Y., He, W. W., Okumura, K. & Li, E. (1999) Gene 236, 87-95.
31. Lyko, F., Ramsahoye, B. H., Kashevsky, H., Tudor, M., Mastrangelo, M. A., Orr-Weaver, T. L. & Jaenisch, R. (1999) Nat. Genet. 23, 363-366.
32. Okano, M., Bell, D. W., Haber, D. A. & Li, E. (1999) Cell 99, 247-257.
33. Xu, G. L., Bestor, T. H., Bourc'his, D., Hsieh, C. L., Tommerup, N., Bugge, M., Hulten, M., Qu, X. Y., Russo, J. J. & Viegas-Pequignot, E. (1999) Nature (London) 402, 187-191.
34. Hansen, R. S., Wijmenga, C., Luo, P., Stanek, A. M., Canfield, T. K., Weemaes, C. M. & Gartler, S. M. (1999) Proc. Natl. Acad. Sci. USA 96, 14412-11417.
35. Chang, C., Bowman, J. L., DeJohn, A. W., Lander, E. S. & Meyerowitz, E. M. (1988) Proc. Natl. Acad. Sci. USA 85, 6856-6860.
36. Cheng, X., Kumar, S., Posfai, J., Pflugrath, J. W. & Roberts, R. J. (1993) Cell 74, 299-307.
37. Klimasauskas, S., Kumar, S., Roberts, R. J. & Cheng, X. (1994) Cell 76, 357-369.
38. Nakai, K. & Kanehisa, M. (1992) Genomics 14, 897-911.
39. Schultz, J., Milpetz, F., Bork, P. & Ponting, C. P. (1998) Proc. Natl. Acad. Sci. USA 95, 5857-5864.
40. Hofmann, K. & Bucher, P. (1996) Trends Biochem. Sci. 21, 172-173.
41. Dieckmann, T., Withers-Ward, E. S., Jarosinski, M. A., Liu, C. F., Chen, I. S. & Feigon, J. (1998) Nat. Struct. Biol. 5, 1042-1047.
42. Mozo, T., Dewar, K., Dunn, P., Ecker, J. R., Fischer, S., Kloska, S., Lehrach, H., Marra, M., Martienssen, R., Meier-Ewert, S. & Altmann, T. (1999) Nat. Genet. 22, 271-275.
43. Posfai, J., Bhagwat, A. S., Posfai, G. & Roberts, R. J. (1989) Nucleic Acids Res. 17, 2421-2435.
44. Reinisch, K. M., Chen, L., Verdine, G. L. & Lipscomb, W. N. (1995) Cell 82, 143-153.
45. Jeltsch, A. (1999) J. Mol. Evol. 49, 161-164.
46. Xu, S., Xiao, J., Posfai, J., Maunus, R. & Benner, J., 2nd (1997) Nucleic Acids Res. 25, 3991-3994.
47. Karreman, C. & de Waard, A. (1990) J. Bacteriol. 172, 266-272.
48. Schauber, C., Chen, L., Tongaonkar, P., Vega, I., Lambertson, D., Potts, W. & Madura, K. (1998) Nature (London) 391, 715-718.
49. Wang, Y., Yeung, Y. G., Langdon, W. Y. & Stanley, E. R. (1996) J. Biol. Chem. 271, 17-20.
50. Lee, P. S., Wang, Y., Dominguez, M. G., Yeung, Y. G., Murphy, M. A., Bowtell, D. D. & Stanley, E. R. (1999) EMBO J. 18, 3616-3628.
51. Joazeiro, C. A., Wing, S. S., Huang, H., Leverson, J. D., Hunter, T. & Liu, Y. C. (1999) Science 286, 309-312.
52. Withers-Ward, E. S., Jowett, J. B., Stewart, S. A., Xie, Y. M., Garfinkel, A., Shibagaki, Y., Chow, S. A., Shah, N., Hanaoka, F., Sawitz, D. G., et al. (1997) J. Virol. 71, 9732-9742.
53. Vadlamudi, R. K., Joung, I., Strominger, J. L. & Shin, J. (1996) J. Biol. Chem. 271, 20235-20237.
54. Salamov, A. A. & Solovyev, V. V. (1995) J. Mol. Biol. 247, 11-15.