Identification and characterization of a β proteasome subunit cluster in the Japanese pufferfish (Fugu rubripes)

Journal of Immunology

Volumn 165, Issue 8, 2000, Pages 4446-4452

  Clark, M S ^a   Pontarotti, P ^a   Gilles, A ^a   Kelly, A ^a   Elgar, G ^a  

^a UK HGMP Resource Centre   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

GAMMA INTERFERON; PROTEASOME;

ARTICLE; ENZYME SUBUNIT; GENE CLUSTER; GENE DUPLICATION; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PSEUDOGENE; TELEOST;

FUGU RUBRIPES;

EID: 0034667983     PISSN: 00221767     EISSN: None     Source Type: Journal    
DOI: 10.4049/jimmunol.165.8.4446     Document Type: Article

References (50)

1. The genetics of proteasomes and antigen processing
2. H-2-linked low-molecular weight polypeptide antigens assemble into an unusual macromolecular complex
3. The LMP antigen: A stable MHC controlled multisubunit protein complex
4. Homology of proteasome subunits to a major histocompatibility complex-linked LMP genes
5. Second proteasome-related gene in the human MHC class II region
6. Alternative exon usage and processing of the major histocompatibility complex-encoded proteasome subunits
7. Newly identified pair of proteasome subunits regulated reciprocally by interferon γ
8. The mouse genes encoding the third pair of β-type proteasome subunits regulated reciprocally by IFN-γ
9. cDNA cloning and interferon γ down-regulation of proteasomal subunits X and Y
10. Displacement of housekeeping proteasome subunits by MHC-encoded LMPs: A newly discovered mechanism for modulating the multicatalytic proteinase complex
11. MHC-linked LMP gene products specifically alter peptidase activities of the proteasome
12. γ Interferon and expression of MHC genes regulate peptide hydrolysis by proteasomes
13. Chromosomal localization of the proteasome Z subunit reveals an ancient chromosomal duplication involving the major histocompatibility complex
14. Genome dynamics of the major histocompatibility complex: Insights from genome paralogy
15. The chromosomal duplication model of the major histocompatibility complex
16. Genetic linkage between the LMP2 and LMP7 genes in the medaka fish, a teleost
17. Expression, linkage and polymorphism of MHC-related genes in rainbow trout, Onchorhynchus mykiss
18. Analysis of a 26kb region linked to the MHC in zebrafish: Genomic organization of the proteasome component β/transporter associated with antigen processing-2 gene cluster and identification of five new proteasome β subunit genes
19. A rapid alkaline extraction procedure for screening recombinant DNA
20. Experiment files and their application during large-scale sequencing projects
21. A new sequence assembly program
22. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
23. The SWISS-PROT protein sequence data bank and its supplement TREMBL
24. The European Bioinformatics Institute (EBI) databases
25. A dot matrix program with dynamic threshold control suited for genomic DNA and protein alignment
26. A time efficient, linear-space local similarity algorithm
27. CLUSTAL V: Improved software for multiple sequence alignment
28. Divergence time estimates for the early history of animal phyla and the origin of plants, animals and fungi
29. Confidence limits on phylogenies: An approach using the bootstrap
30. Prediction of human mRNA donor and acceptor sites from the DNA sequence
31. DNA sequence analysis of 66kb of the human MHC class II region encoding a cluster of genes for antigen processing
32. Map of the human MHC
33. Evolution of proteasome subunits γ and LMP2
34. Isolation of Xenopus LMP-7 homologues: Striking allelic diversity and linkage to MHC
35. Linkage of LMP, TAP, and RING3 with MHC class I rather than class II genes in the zebrafish
36. The major histocompatibility complex in swine
37. Comparative genome organization of the major histocompatibility complex: Lessons from the Felidae
38. Identification and genetic mapping of Xenopus TAP2 genes
39. Genetic organization, polymorphism and function of the bovine MHC
40. A tight cluster of five unrelated human genes on chromosome 16q22.1
41. Genomics of the major histocompatibility complex: Haplotypes, duplication, retroviruses and disease
42. The evolution of MHC diversity by segmental duplication and transposition of retroelements
43. Divergent intron arrangement in the MB1/LMP7 proteasome gene pair
44. Structural analysis and chromosomal localization of the mouse Psmb5 gene coding for the constitutively expressed β-type proteasome subunit
45. Evolution of the mammalian MHC: Natural selection, recombination, and convergent evolution
46. Insight into the primordial MHC from studies in ectothermic vertebrates
47. The MHC big bang
48. Evolutionary significance of intragenome duplications on human chromosomes
49. Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosomes 6, 9 and 1
50. Evolution of the proteasome components