-
1
-
-
0032488846
-
The proteasome: Paradigm of a self-compartmentalizing protease
-
Baumeister, W., J. Walz, F. Zühl, and E. Seemüller. 1998. The proteasome: paradigm of a self-compartmentalizing protease. Cell 92:367.
-
(1998)
Cell
, vol.92
, pp. 367
-
-
Baumeister, W.1
Walz, J.2
Zühl, F.3
Seemüller, E.4
-
2
-
-
0031887332
-
Proteasomes: Structure and biology
-
Tanaka, K. 1998. Proteasomes: structure and biology. J. Biochem. 123:195.
-
(1998)
J. Biochem.
, vol.123
, pp. 195
-
-
Tanaka, K.1
-
3
-
-
0030897031
-
Structure of 20S proteasome from yeast at 2.4Å resolution
-
Groll, M., L. Ditzel, J. Löwe, D. Stock, M. Bochtler, D. Bartunik, and R. Huber. 1997. Structure of 20S proteasome from yeast at 2.4Å resolution. Nature 386: 463.
-
(1997)
Nature
, vol.386
, pp. 463
-
-
Groll, M.1
Ditzel, L.2
Löwe, J.3
Stock, D.4
Bochtler, M.5
Bartunik, D.6
Huber, R.7
-
4
-
-
0030774890
-
The active sites of the eukaryotic 20S proteasome and their involvement in subunit precursor processing
-
Heinemeyer, W., M. Fischer, T. Krimmer, U. Stachon, and D. Wolf. 1997. The active sites of the eukaryotic 20S proteasome and their involvement in subunit precursor processing. J. Biol. Chem. 272:25000.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 25000
-
-
Heinemeyer, W.1
Fischer, M.2
Krimmer, T.3
Stachon, U.4
Wolf, D.5
-
5
-
-
0031819536
-
The MHC class I ligand-generating system: Roles of immunoproteasomes and the interferon-γ-inducible proteasome activator PA28
-
Tanaka, K., and M. Kasahara. 1998. The MHC class I ligand-generating system: roles of immunoproteasomes and the interferon-γ-inducible proteasome activator PA28. Immunol. Rev. 163:161.
-
(1998)
Immunol. Rev.
, vol.163
, pp. 161
-
-
Tanaka, K.1
Kasahara, M.2
-
6
-
-
0027223877
-
MHC-linked LMP gene products specifically alter peptidase activities of the proteasome
-
Driscoll, J., M. G. Brown, D. Finley, and J. J. Monaco. 1993. MHC-linked LMP gene products specifically alter peptidase activities of the proteasome. Nature 365:262.
-
(1993)
Nature
, vol.365
, pp. 262
-
-
Driscoll, J.1
Brown, M.G.2
Finley, D.3
Monaco, J.J.4
-
8
-
-
0002568489
-
Introduction: The ABC transporter channel superfamily: An overview
-
Higgins, C. F. 1993. Introduction: the ABC transporter channel superfamily: an overview. Semin. Cell Biol. 4:1.
-
(1993)
Semin. Cell Biol.
, vol.4
, pp. 1
-
-
Higgins, C.F.1
-
9
-
-
0031895637
-
Mechanisms of MHC class 1-restricted antigen processing
-
Pamer, E., and P. Cresswell. 1998. Mechanisms of MHC class 1-restricted antigen processing. Annu. Rev. Immunol. 16:323.
-
(1998)
Annu. Rev. Immunol.
, vol.16
, pp. 323
-
-
Pamer, E.1
Cresswell, P.2
-
10
-
-
0028988470
-
"Both man & bird & beast": Comparative organization of MHC genes
-
Trowsdale, J. 1995. "Both man & bird & beast": comparative organization of MHC genes. Immunogenetics 41:1.
-
(1995)
Immunogenetics
, vol.41
, pp. 1
-
-
Trowsdale, J.1
-
11
-
-
0030273083
-
Regulation of LMP2 and TAP1 genes by 1RF-1 explains the paucity of CD8(+)T cells in IRF-1(-/-) mice
-
White, L. C., K. L. Wright, N. J. Felix, H. Ruffner, L. F. L. Reis, R. Pine, and J. P. Y. Ting. 1996. Regulation of LMP2 and TAP1 genes by 1RF-1 explains the paucity of CD8(+)T cells in IRF-1(-/-) mice. Immunity 5:365.
-
(1996)
Immunity
, vol.5
, pp. 365
-
-
White, L.C.1
Wright, K.L.2
Felix, N.J.3
Ruffner, H.4
Reis, L.F.L.5
Pine, R.6
Ting, J.P.Y.7
-
12
-
-
0028927841
-
Coordinate regulation of the human TAP1 and LMP2 genes from a shared bidirectional promoter
-
Wright, K. L., L. C. White, A. Kelly, S. Beck, J. Trowsdale, and J. P.-Y. Ting. 1995. Coordinate regulation of the human TAP1 and LMP2 genes from a shared bidirectional promoter. J. Exp. Med. 181:1459.
-
(1995)
J. Exp. Med.
, vol.181
, pp. 1459
-
-
Wright, K.L.1
White, L.C.2
Kelly, A.3
Beck, S.4
Trowsdale, J.5
Ting, J.P.-Y.6
-
15
-
-
0029830046
-
Chromosomal localization of the proteasome Z subunit gene reveals an ancient chromosomal duplication involving the major histocompatibility complex
-
Kasahara, M., M. Hayashi, K. Tanaka, H. Inoko, K. Sugaya, T. Ikemura, and T. Ishibashi. 1996. Chromosomal localization of the proteasome Z subunit gene reveals an ancient chromosomal duplication involving the major histocompatibility complex. Proc. Natl. Acad. Sci. USA 93:9096.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 9096
-
-
Kasahara, M.1
Hayashi, M.2
Tanaka, K.3
Inoko, H.4
Sugaya, K.5
Ikemura, T.6
Ishibashi, T.7
-
16
-
-
0030200739
-
Paralogy mapping: Identification of a region in the human MHC triplicated onto human chromosomes 1 and 9 allows the prediction and isolation of novel PBX and NOTCH loci
-
Katsanis, N., J. Fitzgibbon, and E. M. C. Fisher. 1996. Paralogy mapping: identification of a region in the human MHC triplicated onto human chromosomes 1 and 9 allows the prediction and isolation of novel PBX and NOTCH loci. Genomics 35:101.
-
(1996)
Genomics
, vol.35
, pp. 101
-
-
Katsanis, N.1
Fitzgibbon, J.2
Fisher, E.M.C.3
-
17
-
-
18244431887
-
Vertebrate genome evolution and the zebrafish gene map
-
Postlethwait, J. H., Y.-L. Yan, M. A. Gates, S. Horne, A. Amores, A. Brownlie, A. Donovan, E. S. Egan, A. Force, Z. Gong, et al. 1998. Vertebrate genome evolution and the zebrafish gene map. Nat. Genet. 18:345.
-
(1998)
Nat. Genet.
, vol.18
, pp. 345
-
-
Postlethwait, J.H.1
Yan, Y.-L.2
Gates, M.A.3
Horne, S.4
Amores, A.5
Brownlie, A.6
Donovan, A.7
Egan, E.S.8
Force, A.9
Gong, Z.10
-
18
-
-
0031830374
-
Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosome 6, 9 and 1
-
Hughes, A. L. 1998. Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosome 6, 9 and 1. Mol. Biol. Evol. 15:854.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 854
-
-
Hughes, A.L.1
-
20
-
-
0031573543
-
Linkage of LMP, TAP, and RING3 with Mhc class I rather than class II genes in the zebrafish
-
Takami, K., Z. Zaleska-Rutczynska, F. Figueroa, and J. Klein. 1997. Linkage of LMP, TAP, and RING3 with Mhc class I rather than class II genes in the zebrafish. J. Immunol. 159:6052.
-
(1997)
J. Immunol.
, vol.159
, pp. 6052
-
-
Takami, K.1
Zaleska-Rutczynska, Z.2
Figueroa, F.3
Klein, J.4
-
21
-
-
0031882003
-
Analysis of Zebrafish Mhc using BAC clones
-
Graser, R., V. Vincek, K. Takami, F. Figueroa, and J. Klein. 1998. Analysis of Zebrafish Mhc using BAC clones, Immunogenetics 47:318.
-
(1998)
Immunogenetics
, vol.47
, pp. 318
-
-
Graser, R.1
Vincek, V.2
Takami, K.3
Figueroa, F.4
Klein, J.5
-
22
-
-
0030946138
-
Mapping of Mhc class I and class II regions to different linkage groups in the zebrafish, Danio rerio
-
Bingulac-Popovic, J., F. Figueroa, W. S. Talbot, S. L. Johnson, M. Gates, J. H. Postlethwait, and J. Klein. 1997. Mapping of Mhc class I and class II regions to different linkage groups in the zebrafish, Danio rerio. Immunogenetics 46:129.
-
(1997)
Immunogenetics
, vol.46
, pp. 129
-
-
Bingulac-Popovic, J.1
Figueroa, F.2
Talbot, W.S.3
Johnson, S.L.4
Gates, M.5
Postlethwait, J.H.6
Klein, J.7
-
23
-
-
0031812123
-
Linkage of RXRB-like genes to class I and not class II Mhc genes in the zebrafish
-
Gongora, R., Z. Zaleska-Rutczynska, K. Takami, F. Figueroa, and J. Klein. 1998. Linkage of RXRB-like genes to class I and not class II Mhc genes in the zebrafish. Immunogenetics 48:141.
-
(1998)
Immunogenetics
, vol.48
, pp. 141
-
-
Gongora, R.1
Zaleska-Rutczynska, Z.2
Takami, K.3
Figueroa, F.4
Klein, J.5
-
25
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
26
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406
-
-
Saitou, N.1
Nei, M.2
-
28
-
-
0003496662
-
-
Pennsylvania State University, University Park, PA
-
Kumar, S., K. Tamura, and M. Nei. 1993. MEGA: Molecular Evolutionary Genetic Analysis, Version 1. 01. Pennsylvania State University, University Park, PA.
-
(1993)
MEGA: Molecular Evolutionary Genetic Analysis, Version 1. 01
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
29
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783.
-
(1985)
Evolution
, vol.39
, pp. 783
-
-
Felsenstein, J.1
-
30
-
-
0031860393
-
Databases on transcription regulation: TRANSFAC, TRRD, and COMPEL
-
Heinemeyer, T., E. Wingender, I. Reuter, H. Hermjakob, A. E. Kel, O. V. Kel, E. V. Ignatieva, E. A. Ananko, O. A. Podkolodnaya, F. A. Kolpakov, N. L. Podkolodny, and N. A. Kolchanov. 1998. Databases on transcription regulation: TRANSFAC, TRRD, and COMPEL. Nucleic Acids Res. 26:364.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 364
-
-
Heinemeyer, T.1
Wingender, E.2
Reuter, I.3
Hermjakob, H.4
Kel, A.E.5
Kel, O.V.6
Ignatieva, E.V.7
Ananko, E.A.8
Podkolodnaya, O.A.9
Kolpakov, F.A.10
Podkolodny, N.L.11
Kolchanov, N.A.12
-
31
-
-
0025276271
-
Nomenclature for the major histocompatibility complexes of different species: A proposal
-
Klein, J., R. E. Bontrop, R. L. Dawkins, H. A. Erlich, E. B. Gyllensten, E. R. Heise, P. P. Jones, P. Parham, E. K. Wakeland, and D. I. Watkins. 1990. Nomenclature for the major histocompatibility complexes of different species: a proposal. Immunogenetics 31:217.
-
(1990)
Immunogenetics
, vol.31
, pp. 217
-
-
Klein, J.1
Bontrop, R.E.2
Dawkins, R.L.3
Erlich, H.A.4
Gyllensten, E.B.5
Heise, E.R.6
Jones, P.P.7
Parham, P.8
Wakeland, E.K.9
Watkins, D.I.10
-
32
-
-
0026749475
-
DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing
-
Beck, S., A. Kelly, E. Radley, F. Khurshid, R. P. Alderton, and J. Trowsdale. 1992. DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing. J. Mol. Biol. 228:433.
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 433
-
-
Beck, S.1
Kelly, A.2
Radley, E.3
Khurshid, F.4
Alderton, R.P.5
Trowsdale, J.6
-
33
-
-
0027308710
-
Genomic organization and tissue expression of mouse proteasome gene Lmp-2
-
Zhou, P., E. Zanelli, M. Smart, and C. David. 1993. Genomic organization and tissue expression of mouse proteasome gene Lmp-2. Genomics 16:664.
-
(1993)
Genomics
, vol.16
, pp. 664
-
-
Zhou, P.1
Zanelli, E.2
Smart, M.3
David, C.4
-
34
-
-
0029005476
-
Characterization and mapping of the gene encoding mouse proteasome subunit Delta (Lmp19)
-
Woodward, E. C., and J. J. Monaco. 1995. Characterization and mapping of the gene encoding mouse proteasome subunit Delta (Lmp19). Immunogenetics 42:28.
-
(1995)
Immunogenetics
, vol.42
, pp. 28
-
-
Woodward, E.C.1
Monaco, J.J.2
-
35
-
-
0031571887
-
The mouse genes encoding the third pair of β-type proteasome subunits regulated reciprocally by IFN-γ. Structural comparison, chromosomal localization, and analysis of the promoter
-
Hayashi, M., T. Ishibashi, K. Tanaka, and M. Kasahara. 1997. The mouse genes encoding the third pair of β-type proteasome subunits regulated reciprocally by IFN-γ. structural comparison, chromosomal localization, and analysis of the promoter. J. Immunol. 159:2760.
-
(1997)
J. Immunol.
, vol.159
, pp. 2760
-
-
Hayashi, M.1
Ishibashi, T.2
Tanaka, K.3
Kasahara, M.4
-
36
-
-
0030761831
-
Transport-associated proteins in Atlantic salmon (Salmo salar)
-
Grimholt, U. 1997. Transport-associated proteins in Atlantic salmon (Salmo salar). Immunogenetics 46:213.
-
(1997)
Immunogenetics
, vol.46
, pp. 213
-
-
Grimholt, U.1
-
37
-
-
0026595367
-
Alternative exon usage and processing of the major histocompatibility complex-encoded proteasome subunits
-
Früh, K., Y. Yang, D. Arnold, J. Chambers, L. Wu, J. B. Waters, T. Spies, and P. A. Peterson. 1992. Alternative exon usage and processing of the major histocompatibility complex-encoded proteasome subunits. J. Biol. Chem. 267:22131.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 22131
-
-
Früh, K.1
Yang, Y.2
Arnold, D.3
Chambers, J.4
Wu, L.5
Waters, J.B.6
Spies, T.7
Peterson, P.A.8
-
38
-
-
0027375176
-
Genomic organization and tissue expression of the mouse proteasome gene Lmp-7
-
Zanelli, E., P. Zhou, H. Cao, M. K. Smart, and C. S. David. 1993. Genomic organization and tissue expression of the mouse proteasome gene Lmp-7. Immunogenetics 38:400.
-
(1993)
Immunogenetics
, vol.38
, pp. 400
-
-
Zanelli, E.1
Zhou, P.2
Cao, H.3
Smart, M.K.4
David, C.S.5
-
39
-
-
0025297353
-
A nuclear factor for IL-6 expression (NF-IL6) is a member of a C/EBP family
-
Akira, S., H. Isshiki, T. Sugita, O. Tanaba, S. Kinoshita, Y. Nishio, T. Nakajima, T. Hirano, and T. Kishimoto. 1990. A nuclear factor for IL-6 expression (NF-IL6) is a member of a C/EBP family. EMBO J. 9:1897.
-
(1990)
EMBO J.
, vol.9
, pp. 1897
-
-
Akira, S.1
Isshiki, H.2
Sugita, T.3
Tanaba, O.4
Kinoshita, S.5
Nishio, Y.6
Nakajima, T.7
Hirano, T.8
Kishimoto, T.9
-
40
-
-
0024380583
-
Structurally similar but functionally distinct factors, IRF-1 and IRF-2 bind to the same regulatory elements of IFN and IFN-inducible genes
-
Harada, H., T. Fujita, M. Miyamoto, Y. Kimura, M. Maruyama, A. Furia, T. Miyata, and T. Taniguchi. 1989. Structurally similar but functionally distinct factors, IRF-1 and IRF-2 bind to the same regulatory elements of IFN and IFN-inducible genes. Cell 58:729.
-
(1989)
Cell
, vol.58
, pp. 729
-
-
Harada, H.1
Fujita, T.2
Miyamoto, M.3
Kimura, Y.4
Maruyama, M.5
Furia, A.6
Miyata, T.7
Taniguchi, T.8
-
41
-
-
0027261242
-
Different genomic structure of mouse and human Lmp7 genes: Characterization of MHC-encoded proteasome genes
-
Meinhardt, T., U. Gräf, and G. J. Hämmerling. 1993. Different genomic structure of mouse and human Lmp7 genes: characterization of MHC-encoded proteasome genes. Immunogenetics 38:373.
-
(1993)
Immunogenetics
, vol.38
, pp. 373
-
-
Meinhardt, T.1
Gräf, U.2
Hämmerling, G.J.3
-
42
-
-
0027529514
-
The major histocompatibility complex-encoded proteasome component LMP7: Alternative first exons and post-translational processing
-
Glynne, R., L.-A. Kerr, I. Mockridge, S. Beck, A. Kelly, and J. Trowsdale. 1993. The major histocompatibility complex-encoded proteasome component LMP7: alternative first exons and post-translational processing. Eur. J. Immunol. 23:860.
-
(1993)
Eur. J. Immunol.
, vol.23
, pp. 860
-
-
Glynne, R.1
Kerr, L.-A.2
Mockridge, I.3
Beck, S.4
Kelly, A.5
Trowsdale, J.6
-
43
-
-
0030044440
-
Genomic organization of a mouse MHC class II region including the H2-M and Lmp2 loci
-
Péléraux, A., L. Karlsson, J. Chambers, and P. A. Peterson. 1996. Genomic organization of a mouse MHC class II region including the H2-M and Lmp2 loci. Immunogenetics 43:204.
-
(1996)
Immunogenetics
, vol.43
, pp. 204
-
-
Péléraux, A.1
Karlsson, L.2
Chambers, J.3
Peterson, P.A.4
-
44
-
-
0029147463
-
Isolation of Xenopus LMP7 homologues: Striking allelic diversity and linkage to the MHC
-
Namikawa, C., L. Salter-Cid, M. F. Flajnik, Y. Kato, M. Nonaka, and M. Sasaki. 1995. Isolation of Xenopus LMP7 homologues: striking allelic diversity and linkage to the MHC. J. Immunol. 155:1964.
-
(1995)
J. Immunol.
, vol.155
, pp. 1964
-
-
Namikawa, C.1
Salter-Cid, L.2
Flajnik, M.F.3
Kato, Y.4
Nonaka, M.5
Sasaki, M.6
-
45
-
-
8244241099
-
Evolution of the proteasome components
-
Hughes, A. L. 1997. Evolution of the proteasome components. Immunogenetics 46:82.
-
(1997)
Immunogenetics
, vol.46
, pp. 82
-
-
Hughes, A.L.1
-
46
-
-
0032445153
-
What do the paralogous regions in the genome tell us about the origin of the adaptive immune system?
-
Kasahara, M. 1998. What do the paralogous regions in the genome tell us about the origin of the adaptive immune system? Immunol. Rev. 166:159.
-
(1998)
Immunol. Rev.
, vol.166
, pp. 159
-
-
Kasahara, M.1
-
47
-
-
0026571617
-
Polymorphism in a second ABC transporter gene located within the class II region of the human major histocompatibility complex
-
Powis, S. H., I. Mockridge, A. Kelly, L.-A. Kerr, R. Glynne, U. Gileadi, S. Beck, and J. Trowsdale. 1992. Polymorphism in a second ABC transporter gene located within the class II region of the human major histocompatibility complex. Proc. Natl. Acad. Sci. USA 89:1463.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 1463
-
-
Powis, S.H.1
Mockridge, I.2
Kelly, A.3
Kerr, L.-A.4
Glynne, R.5
Gileadi, U.6
Beck, S.7
Trowsdale, J.8
-
48
-
-
0027301911
-
Expansion of genes that encode MHC class I molecules in cyprinid fishes
-
Okamura, K., T. Nakanishi, Y. Kurosawa, and K. Hashimoto. 1993. Expansion of genes that encode MHC class I molecules in cyprinid fishes. J Immunol. 151: 188.
-
(1993)
J Immunol.
, vol.151
, pp. 188
-
-
Okamura, K.1
Nakanishi, T.2
Kurosawa, Y.3
Hashimoto, K.4
-
49
-
-
0029006675
-
Cloning and characterization of class I Mhc genes of the zebrafish, Brachydanio rerio
-
Takeuchi, H., F. Figueroa, C. O'hUigin, and J. Klein. 1995. Cloning and characterization of class I Mhc genes of the zebrafish, Brachydanio rerio. Immunogenetics 42:77.
-
(1995)
Immunogenetics
, vol.42
, pp. 77
-
-
Takeuchi, H.1
Figueroa, F.2
O'hUigin, C.3
Klein, J.4
|