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Single-letter abbreviations for the amino acid residues are as follows: A, Ala; C, Cys; D, Asp; E, Glu; F, Phe; G, Gly; H, His; I, Ile; K, Lys; L, Leu; M, Met; N, Asn; P, Pro; Q, Gln; R, Arg S, Ser; T, Thr; V, Val; W, Trp; and Y, Tyr. X indicates any residue.
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0345349999
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note
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We amplified fragments containing candidate genes by polymerase chain reaction (PCR) from genomic DNA isolated from spa1 mutant and wild-type plants. These fragments were sequenced using an ABI373 automated sequencer (Perkin-Elmer). Base-pair changes between spa1 mutant and wild-type plants were found in only one of the candidate genes.
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0344487615
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The Nla coding region in the plasmid pRTL2-GUS/ NlaΔBam (23) was replaced by an expanded multiple cloning site: Bgl II-Cla I-Not I-Sal I-BamH I-Xho I. The SPA1 cDNA clone was amplified with primers to create a Cla I site at the ATG and a Sal I site at the TAG, digested with these enzymes, and inserted into the modified pRTL2-GUS/NlaΔBam plasmid to create GUS:SPA1. This plasmid was then digested with Bgl II to remove a fragment containing the first 1773 bp of the SPA1 coding region and religated to create GUS: SPA1ΔN591.
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0345349995
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note
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Total RNA was extracted from 3-day-old seedlings that had been transferred to light for the indicated time using the Qiagen RNeasy Plant Miniprep kit. We separated 5 μg of total RNA on a Mops-RNA gel containing 6.7% formaldehyde and subsequently transferred the RNA to MSI Nylon membrane. The membranes were hybridized with a random prime-labeled PCR product containing the full-length SPA1 cDNA and washed with a final wash with 0.2X saline sodium citrate and 0.1% SDS at 65°C. Membranes were subsequently hybridized with a pea 185 rRNA probe.
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0344487613
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We thank Y. Kang and S. Moran for excellent technical assistance, M. Hudson for critical reading of the manuscript, D. Aubert for providing aliquots of a binary cosmid library, and the Arabidopsis Biological Resource Center in Ohio for providing seeds, a cDNA library, and clones. Supported by NIH grant GM-47475 and the U.S. Department of Agriculture, Current Research Information Service number 5335-21000-006-00D.
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