Crystal structure of glycosyltrehalose trehalohydrolase from the hyperthermophilic archaeum Sulfolobus solfataricus

Journal of Molecular Biology

Volumn 301, Issue 2, 2000, Pages 451-464

  Feese, Michael D ^a   Kato, Yoichi ^a   Tamada, Taro ^a   Kato, Masaru ^a   Komeda, Toshihiro ^a   Miura, Yutaka ^a   Hirose, Masako ^a   Hondo, Keiji ^a   Kobayashi, Kazuo ^a   Kuroki, Ryota ^a  

^a KIRIN BREWERY CO LTD   (Japan)

Author keywords

( )8 barrel; Calcium binding; Sulfolobus solfataricus; Trehalohydrolase; Trehalose

Indexed keywords

BACTERIAL ENZYME; GLYCOSIDASE; GLYCOSIDE; HYDROLASE; TREHALOSE;

ARCHAEBACTERIUM; ARTICLE; CALCIUM BINDING; CATALYSIS; CRYSTAL STRUCTURE; ENZYME STRUCTURE; NONHUMAN; PRIORITY JOURNAL; SULFOLOBUS SOLFATARICUS; THERMOPHILIC BACTERIUM; X RAY DIFFRACTION;

ARCHAEA; BACTERIA (MICROORGANISMS); SULFOLOBUS SOLFATARICUS;

EID: 0034636975     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.2000.3977     Document Type: Article

References (73)

1. Basic local alignment search tool
2. Mannosidase II and the 135-KDa Golgi-specific antigen recognized monoclonal antibody 53FC3 are the same dimeric protein
3. Calcium binding in α-amylases: An X-ray diffraction study at 2.1 Å resolution of two enzymes from Aspergillus
4. The structure of human pancreatic alpha-amylase at 1.8 Å resolution and comparisons with related enzymes
5. Crystallographic R-factor refinement by molecular dynamics
6. Structure of the Aspergillus oryzae alpha-amylase complexed with the inhibitor acarbose at 2.0 Å resolution
7. Residues important for folding and dimerisation of recombinant Torpedo californica acetylcholinesterase
8. The crystal structures of Sinapis alba myrosinase and a covalent glycosyl-enzyme intermediate provide insights into the substrate recognition and active-site machinery of S-glycosidase
9. Role of the intersubunit disulfide bond in the unfolding pathway of dimeric red kidney bean purple acid phosphatase
10. Nomenclature for sugar-binding subsites in glycosyl hydrolases
11. The role of trehalose in cell stress
12. The metabolism of alpha, alphatrehalose
13. Crystal structure of a catalytic-site mutant α-amylase from Bacillus subtilis complexed with maltopentaose
14. PHASES-95: A program package for the processing and analysis of diffraction data from macromolecules
15. Thermal stabilization of thymidylate synthase by engineering two disulfide bridges across the dimer interface
16. X-ray structure of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011. Comparison of two independent molecules at 1.8 Å resolution
17. Structure-based design and protein engineering of intersubunit disulfide bonds in gonadotropins
18. A classification of glycosyl hydrolases based on amino acid sequence similarity
19. Crystal structure of thermostable alpha-amylase form Bacillus licheniformis refined at 1.7 Å resolution
20. Roles of the catalytic domain and two cellulose binding domains of Thermonospora fusca E4 in cellulose hydrolysis
21. 8-barrel domains
22. 8-barrel enzymes revealed by conserved regions of α-amylase
23. 8-barrel glycosyl hydrolases suggested by the similarity of thier fifth conserved sequence region
24. Beta-1,4-N-acetylgalactosaminylotransferase (GM2 synthase) is released from Golgi membranes as a neuraminidase-sensitive, disulfide-bonded dimer by cathepsin D-like protease
25. Comparison of the domain level organization of starch hydrolases and related enzymes
26. Starch and glycogendebranching and branching enzymes: Prediction of structural features of the catalytic (β/α)8-barrel domain and evolutionary relationship to other amylolytic enzymes
27. Structure of the N-terminal cellulose-binding domain of Cellulomonas fimi CenC determined by nuclear magnetic resonance spectroscopy
28. Crystal and molecular structure of barley α-amylase
29. Molecular structure of a barley alpha-amyase-inhibitor complex: Implications for starch binding and catalysis
30. Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amyase II (TVA II) hydrolyzing cyclodextrins and pullulan at 2.6 Å resolution
31. Reaction mechanism of a new glycosyltrehalose-hydrolyzing enzyme isolated from the hyperthermophilic archaeum, Sulfolobus solfataricus KM1
32. Purification and characterization of new trehalose-producing enzymes isolated from the hyperthermophilic archae, Sulfolobus solfataricus KM1
33. Three-dimensional structure of Pseudomonas isoamylase at 2.2 Å resolution
34. Crystal structure of a maltogenic amylase provides insights into a catalytic versatility
35. Gene cloning and expression of new trehalose-producing enzymes from the hyperthermophilic archaeum Sulfolobus solfataricus KM1
36. Stereochemistry and the mechanism of enzymatic reactions
37. PROCHECK-a program to check the stereochemical quality of protein structures
38. The interpretation of protein structures: Estimation of static accessibility
39. The allosteric activation of mammalian alpha-amylase by chloride
40. Chain reversals in proteins
41. Activation of Bacillus licheniformis alpha-amylase through a disorder → order transition of the substrate-binding site mediated by a calcium-sodium-calcium metal triad
42. Three hTIM mutants that provide new insights on why TIM is a dimer
43. Determination of protein molecular weight, hydration, and packing from crystal density
44. High level production of thermostable α-amylase from Sulfolobus solfataricus in high-cell density culture of the food yeast Candida utilis
45. Crystal structure of a maltotetraose-forming exo-amylase from Pseudomonas stutzeri
46. Refinement of macromolecular structures with the maximum-likelihood method
47. Efficient anisotropic refinement of macromolecular structures using FFT
48. Purification and properties of a novel enzyme, maltooligosyl trehalose trehalohydrolase, from Arthrobacter sp. Q36
49. Purification and properties of a novel enzyme, maltooligosyl trehalose synthase, from Arthrobacter sp. Q36
50. The role of trehalose and other carbohydrates in biopreservation
51. Processing of X-ray diffraction data collected in oscillation mode
52. The raw starch binding domain of cyclodextrin glycosyltransferase from Bacillus circulans strain 251
53. Dissociative thermal inactivation, stability, and activity of oligomeric enzymes
54. Desiccation tolerance of prokaryotes
55. Structure and molecular model refinement of pig pancreatic alpha-amylase at 2.1 Å resolution
56. The active center of a mammalian α-amylase. Structure of the complex of a pancreatic α-amylase with a carbohydrate inhibitor refined to 2.2-Å resolution
57. Carbohydrate binding sites in a pancreatic α-amylase-substrate complex, derived from X-ray structure analysis at 2.1 Å resolution
58. Structure of human salivary α-amylase at 1.6 Å resolution: Implications for its role in the oral cavity
59. Purification and properties of alpha-mannosidase II from Golgi-like membranes of baculovirus-infected Spodoptera frugiperda (IPLB-21AE) cells
60. Kinetics and energetics of subunit dissociation/unfolding of TIM: The importance of oligomerization for conformational persistence and chemical stability of proteins
61. Solution structure of the granular starch binding domain of Aspergillus niger glucoamylase bound to beta-cyclodextrin
62. Mutational analysis of glycosylase function
63. Structure and molecular model refinement of Aspergillus oryzae (TAKA) alpha-amylse: An application of the simulated-annealing method
64. An efficient general-purpose least-squares refinement program for macromolecular structures
65. X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the α-amylase family
66. Crystal structure of heat-labile enterotoxin from Escherichia coli with increased thermostability introduced by an engineered disulfide bond in the A subunit
67. Atomic features of protein-carbohydrate interactions
68. Function of conserved tryptophans in the Aspergillus niger glucoamylase 1 starch binding domain
69. Solution structure of a cellulose-binding domain Cellulomonas fimi by nuclear magnetic resonance spectroscopy
70. Crystal structure of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose
71. PowerBLAST: A new network BLAST application for interactive or automated sequence analysis and annotation
72. EDPDB: A multi-functional fool for protein structure analysis