cDNA cloning and expression analysis of new members of the mammalian F- box protein family

Genomics

Volumn 67, Issue 1, 2000, Pages 40-47

  Ilyin, Gennady P ^a   Rialland, Mickael ^a   Pigeon, Christelle ^a   Guguen Guillouzo, Christiane ^a  

^a PONTCHAILLOU UNIVERSITY HOSPITAL   (France)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; LEUCINE; PROTEASOME; UBIQUITIN PROTEIN LIGASE;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; HUMAN; HUMAN CELL; HUMAN TISSUE; MAMMAL; MOLECULAR CLONING; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN EXPRESSION; PROTEIN FAMILY; PROTEIN PROTEIN INTERACTION; SEQUENCE HOMOLOGY;

ANIMALIA; BACTERIA (MICROORGANISMS); MAMMALIA;

EID: 0034235669     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.2000.6211     Document Type: Article

References (39)

1. Achstetter T., Franzusoff A., Field C., Schekman R. SEC7 encodes an unusual, high molecular weight protein required for membrane traffic from the yeast Golgi apparatus. J. Biol. Chem. 263:1988;11711-11717.
2. Altschul S. F., Madden T. L., Schäffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25:1997;3389-3402.
3. Bai C., Richman R., Elledge S. J. Human cyclin F. EMBO J. 13:1994;6087-6098.
4. Bai C., Sen P., Hofmann K., Ma L., Goebl M., Harper J. W., Elledge S. J. SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell. 86:1996;263-274.
5. 2+ and the beta-phosphate to destabilize GDP on ARF1. EMBO J. 17:1998;3651-3659.
6. Carrano A. C., Eytan E., Hershko A., Pagano M. SKP2 is required for ubiquitin-mediated degradation of the CDK inhibitor p27. Nat. Cell Biol. 1:1999;193-199.
7. Cenciarelli C., Chiaur D. S., Guardavaccaro D., Parks W., Vidal M., Pagano M. Identification of a family of human F-box proteins. Curr. Biol. 9:1999;1177-1179.
8. Chardin P., Paris S., Antonny B., Robineau S., Beraud-Dufour S., Jackson C. L., Chabre M. A human exchange factor for ARF contains Sec7- and pleckstrin-homology domains. Nature. 384:1996;481-484.
9. Claude A., Zhao B. P., Kuziemsky C. E., Dahan S., Berger S. J., Yan J. P., Armold A. D., Sullivan E. M., Melancon P. GBF1: A novel Golgi-associated BFA-resistant guanine nucleotide exchange factor that displays specificity for ADP-ribosylation factor 5. J. Cell Biol. 146:1999;71-84.
10. Duff K., Parsons J., Hodgman T. C. Secondary structure analysis identifies a putative mouse protein demonstrating similarity to the repeat units found in CDC4, the G protein beta subunits and related proteins. DNA Seq. 3:1992;213-220.
11. Elledge S. J., Harper J. W. The role of protein stability in the cell cycle and cancer. Biochim. Biophys. Acta. 1377:1998;M61-M70.
12. Erhardt J. A., Hyniska W., DiBenedetto A., Shen N., Stone N., Paulson H., Pittman R. N. A novel F-box protein, NFB42, is highly enriched in neurons and induced growth arrest. J. Biol. Chem. 273:1998;35222-35227.
13. Franco M., Boretto J., Robineau S., Monier S., Goud B., Chardin P., Chavrier P. ARNO3, a Sec7-domain guanine nucleotide exchange factor for ADP ribosylation factor 1, is involved in the control of Golgi structure and function. Proc. Natl. Acad. Sci. USA. 95:1998;9926-9931.
14. 2+ transport system. Mol. Microbiol. 5:1991;2753-2762.
15. Haas A. L., Siepmann T. J. Pathways of ubiquitin conjugation. FASEB J. 11:1997;1257-1268.
16. Hochstrasser M. Ubiquitin-dependent protein degradation. Annu. Rev. Genet. 30:1996;405-439.
17. Ianakiev P., Kilpatrick M. W., Dealy C., Kosher R., Korenberg J. R., Chen X. N., Tsipouras P. A novel human gene encoding an F-box/WD40 containing protein maps in the SHFM3 critical region on 10q24. Biochem. Biophys. Res. Commun. 261:1999;64-70.
18. Ilyin G. P., Rialland M., Glaise D., Guguen-Guillouzo C. Identification of a novel Skp2-like mammalian protein containing F-box and leucine-rich repeats. FEBS Lett. 459:1999;75-79.
19. Jiang J., Struhl G. Regulation of the Hedgehog and Wingless signalling pathways by the F-box/WD40-repeat protein Slimb. Nature. 391:1998;493-496.
20. Klarlund J. K., Guilherme A., Holik J. J., Virbasius J. V., Chawla A., Czech M. P. Signaling by phosphoinositide-3,4,5-trisphosphate through proteins containing pleckstrin and Sec7 homology domains. Science. 275:1997;1927-1930.
21. SKP2: Evidence for evolutionary conservation in the subunit composition of the CDC34-SCF pathway. EMBO J. 17:1998;368-383.
22. Lyapina S. A., Correll C. C., Kipreos E. T., Deshaies R. J. Human CUL1 forms an evolutionarily conserved ubiquitin ligase complex (SCF) with SKP1 and an F-box protein. Proc. Natl. Acad. Sci. USA. 95:1998;7451-7456.
23. Margottin F., Bour S. P., Durand H., Selig L., Benichou S., Richard V., Thomas D., Strebel K., Benarous R. A novel human WD protein, h-βTrCP, that interacts with HIV-1 Vpu connects CD4 to the ER degradation pathway through an F-box motif. Mol. Cell. 1:1998;565-574.
24. Marti A., Wirbelauer C., Scheffner M., Krek W. Interaction between ubiquitin-protein ligase SCFSKP2 and E2F-1 underlies the regulation of E2F-1 degradation. Nat. Cell Biol. 1:1999;14-19.
25. Meacci E., Tsai S. C., Adamik R., Moss J., Vaughan M. Cytohesin-1, a cytosolic guanine nucleotide-exchange protein for ADP-ribosylation factor. Proc. Natl. Acad. Sci. USA. 94:1997;1745-1748.
26. Michel J. J., Xiong Y. Human CUL-1, but not other cullin family members, selectively interacts with SKP1 to form a complex with SKP2 and cyclin A. Cell Growth Differ. 9:1998;435-449.
27. Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 5:1998;355-364.
28. Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 6:1999;63-70.
29. Pagano M. Cell cycle regulation by the ubiquitin pathway. FASEB J. 11:1997;1065-1075.
30. Patton E. E., Willems A. R., Tyers M. Combinatory control in ubiquitin-dependent proteolysis: Don't Skp the F-box hypothesis. Trends Genet. 14:1998;236-243.
31. Sata M., Donaldson J. G., Moss J., Vaughan M. Brefeldin A-inhibited guanine nucleotide-exchange activity of Sec7 domain from yeast Sec7 with yeast and mammalian ADP ribosylation factors. Proc. Natl. Acad. Sci. USA. 95:1998;4204-4208.
32. Sidow A., Bulotsky M. S., Kerrebrock A. W., Birren B. W., Altshuler D., Jaenisch R., Johnson K. R., Lander E. S. A novel member of the F-box/WD40 gene family, encoding dactylin, is disrupted in the mouse dactylaplasia mutant. Nat. Genet. 23:1999;104-107.
33. Kip1 degradation and induces S phase in quiescent cells. Nat. Cell Biol. 1:1999;207-214.
34. Suzuki H., Chiba T., Kobayashi M., Takeuchi M., Suzuki T., Ichiyama A., Ikenoue T., Omata M., Furuichi K., Tanaka K. IκBα ubiquitination is catalyzed by an SCF-like complex containing Skp1, Cullin-1 and two F-box/WD40-repeat proteins,β-TrCP1 and β-TrCP2. Biochem. Biophys. Res. Commun. 256:1999;127-132.
35. Togawa A., Morinaga N., Ogasawara M., Moss J., Vaughan M. Purification and cloning of a brefeldin A-inhibited guanine nucleotide-exchange protein for ADP-ribosylation factors. J. Biol Chem. 274:1999;12308-12315.
36. Thompson J. D., Higgins D. G., Gibson T. J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22:1994;4673-4680.
37. Tsvetkov L. M., Yeh K. H., Lee S. J., Sun H., Zhang H. p27(Kip1) ubiquitination and degradation is regulated by the SCF(Skp2) complex through phosphorylated Thr187 in p27. Curr. Biol. 9:1999;661-664.
38. Winston J. T., Koepp D. M., Zhu C., Elledge S. J., Harper J. W. A family of mammalian F-box proteins. Curr. Biol. 9:1999;1180-1182.
39. Skp2 are essential elements of the cyclinA-CDK2 S phase kinase. Cell. 82:1995;915-925.