Conservation and function of a potential substrate-binding domain in the yeast Clb5 B-type cyclin

Molecular and Cellular Biology

Volumn 20, Issue 13, 2000, Pages 4782-4790

  Cross, Frederick R ^a   Jacobson, Matthew D ^a  

^a ROCKEFELLER UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIN A; CYCLINE; HYDROGEN; PHOSPHOTRANSFERASE INHIBITOR; PROTEIN KINASE;

ARTICLE; BINDING AFFINITY; CRYSTAL STRUCTURE; ENZYME ACTIVITY; HYDROGEN BOND; MITOSIS; MUTATION; NONHUMAN; PRIORITY JOURNAL; YEAST;

AMINO ACID SEQUENCE; BINDING SITES; CELL CYCLE PROTEINS; CONSERVED SEQUENCE; CYCLIN B; CYCLIN-DEPENDENT KINASE INHIBITOR P21; CYCLIN-DEPENDENT KINASE INHIBITOR P27; CYCLINS; EVOLUTION, MOLECULAR; FUNGAL PROTEINS; MICROTUBULE-ASSOCIATED PROTEINS; MUTATION; SACCHAROMYCES CEREVISIAE PROTEINS; SUBSTRATE SPECIFICITY; TUMOR SUPPRESSOR PROTEINS; YEASTS;

EID: 0034124959     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.20.13.4782-4790.2000     Document Type: Article

References (41)

1. Adams, P. D., W. R. Sellers, S. K. Sharma, A. D. Wu, C. M. Nalin, and W. G. Kaelin, Jr. 1996. Identification of a cyclin-cdk2 recognition motif present in substrates and p21-like cyclin-dependent kinase inhibitors. Mol. Cell. Biol. 16:6623-6633.
2. Amon, A., S. Irniger, and K. Nasmyth. 1994. Closing the cell cycle circle in yeast: G2 cyclin proteolysis initiated at mitosis persists until the activation of G1 cyclins in the nest cycle. Cell 77:1037-1050.
3. Bazan, J. 1996. Helical fold prediction for the cyclin box. Proteins 24:1-17.
4. Brown, N. R., M. E. M. Noble, J. A. Endicott, E. F. Garman, S. Wakatsuki, E. Mitchell, B. Rasmussen, T. Hunt, and L. N. Johnson. 1995. The crystal structure of cyclin A. Structure 3:1235-1247.
5. Brown, N. R., M. E. M. Noble, J. A. Endicott, and L. N. Johnson. 1999. The structural basis for specificity of substrate and recruitment peptides for cyclin-dependent kinases. Nat. Cell Biol. 1:438-443.
6. Castaño, E., Y. Kleyner, and B. D. Dynlacht. 1998. Dual cyclin-binding domains are required for p107 to function as a kinase inhibitor. Mol. Cell. Biol. 18:5380-5391.
7. Cross, F. R. 1995. Starting the cell cycle: what's the point? Curr. Opin. Cell Biol. 7:790-797.
8. Cross, F. R., M. Yuste-Rojas, S. Gray, and M. Jacobson. 1999. Specialization and targeting of B-type cyclins. Mol. Cell 4:11-19.
9. Donaldson, A. D., M. K. Raghuraman, K. L. Friedman, F. R. Cross, B. J. Brewer, and W. L. Fangman. 1998. CLB5-dependent activation of late replication origins in S. cerevisiae. Mol. Cell 2:173-182.
10. Epstein, C. B., and F. R. Cross. 1992. CLB5: a novel B cyclin from budding yeast with a role in S phase. Genes Dev. 6:1695-1706.
11. Haase, S., and S. Reed. 1999. Evidence that a free-running oscillator drives G1 events in the budding yeast cell cycle. Nature 401:394-397.
12. Hannon, G. J., D. Demetrick, and D. Beach. 1993. Isolation of the Rb-related p130 through its interaction with CDK2 and cyclins. Genes Dev. 7:2378-2391.
13. Harbour, J., R. Luo, A. Dei Santi, A. Postigo, and D. Dean. 1999. Cdk phosphorylation triggers sequential intramolecular interactions that progressively block Rb functions as cells move through G1. Cell 98:859-869.
14. Henikoff, S., and J. G. Henikoff. 1991. Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA 89:10915-10919.
15. Hodge, A., and M. Mendenhall. 1999. The cyclin-dependent kinase inhibitory domain of the yeast Sic1 protein is contained within the C-terminal 70 amino acids. Mol. Gen. Genet. 262:55-64.
16. Jacobson, M. D., S. Gray, M. Yuste-Rojas, and F. R. Cross. 2000. Testing cyclin specificity in the exit from mitosis. Mol. Cell. Biol. 20:4483-493.
17. James, P., J. Halladay, and E. Craig. 1996. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144:1425-1436.
18. Jeffrey, P. D., A. A. Russo, K. Polyak, E. Gibbs, J. Hurwitz, J. Massague, and N. Pavletich. 1995. Mechanism of CDK activation revealed by the structure of a cyclinA-CDK2 complex. Nature 376:313-320.
19. 1 cyclins differ in their intrinsic functional specificities. Mol. Cell. Biol. 16: 6794-6803.
20. Lim, H. H., P. Y. Goh, and U. Surana. 1998. Cdc20 is essential for the cyclosome-mediated proteolysis of both Pds1 and Clb2 during M phase in budding yeast. Curr. Biol. 8:231-234.
21. Mayer, B. J., and R. Gupta. 1998. Functions of SH2 and SH3 domains. Curr. Top. Microbiol. Immunol. 228:1-22.
22. Mendenhall, M. D., and A. E. Hodge. 1998. Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 62:1191-1243.
23. Merritt, E. A., and D. J. Bacon. 1997. Raster3D: photorealistic molecular graphics. Methods Enzymol. 277:505-524.
24. Nasmyth, K. 1996. At the heart of the budding yeast cell cycle. Trends Genet. 12:405.
25. Nicholls, A., K. A. Sharp, and B. Honig. 1991. Protein folding and association insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11:281-296.
26. Roberts, J. 1999. Evolving ideas about cyclins. Cell 98:129-132.
27. Kip1 cyclin-dependent-kinase inhibitor bound to the cyclin A-Cdk2 complex. Nature 382:325-331.
28. Russo, A. A., P. D. Jeffrey, and N. P. Pavletich. 1996. Structural basis of cyclin-dependent kinase activation by phosphorylation. Nat. Struct. Biol. 3:696-700.
29. CIP1 and Cdc25A: competition between an inhibitor and an activator of cyclin-dependent kinases. Mol. Cell. Biol. 17:4338-4345.
30. Schulman, B. A., D. L. Lindstrom, and E. Harlow. 1998. Substrate recruitment to cyclin-dependent kinase 2 by a multipurpose docking site on cyclin A. Proc. Natl. Acad. Sci. USA 95:10453-10458.
31. SIC1 controls the G1 to S transition in S. cerevisiae. Cell 79:233-244.
32. Schwob, E., and K. Nasmyth. 1993. CLB5 and CLB6, a new pair of B cyclins involved in DNA replication in Saccharomyces cerevisiae. Genes Dev. 7:1160-1175.
33. Segal, M., and S. Reed. 1998. Clb5-associated kinase activity is required early in the spindle pathway for correct preanaphase nuclear positioning in Saccharomyces cerevisiae. J. Cell Biol. 143:135-145.
34. Sherr, C., and J. Roberts. 1999. CDK inhibitors: positive and negative regulators of G1-phase progression. Genes Dev. 13:1501-1512.
35. Shirayama, M., A. Toth, M. Galova, and K. Nasmyth. 1999. APCCDC20 promotes exit from mitosis by destroying the anaphase inhibitor Pds1 and cyclin Clb5. Nature 402:203-207.
36. Stern, B., and P. Nurse. 1996. A quantitative model for the cdc2 control of S phase and mitosis in fission yeast. Trends Genet. 12:345-350.
37. Surana, U., A. Amon, C. Dowzer, J. McGrew, B. Byers, and K. Nasmyth. 1993. Destruction of the CDC28/CLB mitotic kinase is not required for the metaphase to anaphase transition in budding yeast. EMBO J. 12:1969-1978.
38. Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
39. Toyoshima, H., and T. Hunter. 1994. p27, a novel inhibitor of G1 cyclin-Cdk protein kinase activity, is related to p21. Cell 78:67-74.
40. Verma, R., R. M. R. Feldman, and R. J. Deshaies. 1997. SIC1 is ubiquitinated in vitro by a pathway that requires CDC4, CDC34, and cyclin/CDK activities. Mol. Biol. Cell 8:1427-1437.
41. Zhu, L., E. Harlow, and B. Dynlacht. 1995. p107 uses a p21CIP1-related domain to bind cyclin/cdk2 and regulate interactions with E2F. Genes Dev. 15:1740-1752.