Screening orthologs as an important variable in crystallization: Preliminary X-ray diffraction studies of the tRNA-modifying enzyme S-adenosylmethionine:tRNA ribosyl transferase/isomerase

Acta Crystallographica Section D: Biological Crystallography

Volumn 56, Issue 4, 2000, Pages 484-488

  Grimm, Clemens ^a   Klebe, Gerhard ^a   Ficner, Ralf ^a   Reuter, Klaus ^a  

^a PHILIPPS UNIVERSITY MARBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOSYLTRANSFERASE; ISOMERASE; RECOMBINANT PROTEIN; S ADENOSYLMETHIONINE TRNA RIBOSYLTRANSFERASE ISOMERASE; S-ADENOSYLMETHIONINE - TRNA RIBOSYLTRANSFERASE-ISOMERASE;

ARTICLE; BACTERIUM; CHEMISTRY; CRYSTALLIZATION; ENZYMOLOGY; ESCHERICHIA COLI; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR CLONING; X RAY CRYSTALLOGRAPHY;

BACTERIA; CLONING, MOLECULAR; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; ESCHERICHIA COLI; ISOMERASES; PENTOSYLTRANSFERASES; RECOMBINANT PROTEINS;

BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0034055137     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444900001244     Document Type: Article

References (26)

1. Andersson, S. G., Zomorodipour, A., Andersson, J. O., Sicheritz-Ponten, T., Alsmark, U. C., Podowski, R. M., Naslund, A. K., Eriksson, A. S., Winkler, H. H. & Kurland, C. G. (1998). Nature (London), 396, 133-40.
2. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
3. Cudney, R., Patel, S., Weisgraber, K., Newhouse, Y. & McPherson, A. (1994). Acta Cryst. D50, 414-423.
4. Dorman, C. J. & Porter, M. E. (1998). Mol. Microbiol. 29, 677-684.
5. Durand, J. M., Okada, N., Tobe, T., Watarai, M., Fukuda, I., Suzuki, T., Nakata, N., Komatsu, K., Yoshikawa, M. & Sasakawa, C. (1994). J. Bacteriol. 176, 4627-4634.
6. Fraser, C. M., Casjens, S., Huang, W. M., Sutton, G. G., Clayton, R., Lathigra, R., White, O., Ketchum, K. A., Dodson, R., Hickey, E. K., Gwinn, M., Dougherty, B., Tomb, J. F., Fleischmann, R. D., Richardson, D., Peterson, J., Kerlavage, A. R., Quackenbush, J., Salzberg, S., Hanson, M., van Vugt, R., Palmer, N., Adams, M. D., Gocayne, J., Weidman, J., Utterback, T., Watthey, L., McDonald, L., Artiach, P., Bowman, C., Garland, S., Fujii, C., Cotton, M. D., Horst, K., Roberts, K., Hatch, B., Smoth, H. O. & Venter, J. C. (1997). Nature (London), 390, 580-586.
7. Frey, B., McCloskey, J., Kersten, W. & Kersten, H. (1988). J. Bacteriol. 170, 2078-2082.
8. Grädler, U., Ficner, R., Garcia, G. A., Stubbs, M. T., Klebe, G. & Reuter, K. (1999). FEBS Lett. 454, 142-146.
9. Hendrickson, W. A., Horton, J. R. & LeMaster, D. M. (1990). EMBO J. 9, 1665-1672.
10. Jancarik, J. & Kim, S.-H. (1991). J. Appl. Cryst. 24, 409-411.
11. Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S., Kimura, T., Hosouchi, T., Matsuno, A., Muraki, A., Nakazaki, N., Naruo, K., Okumura, S., Shimpo, S., Takeuchi, C., Wada, T., Watanabe, A., Yamada, M., Yasuda, M. & Tabata, S. (1996). DNA Res. 3, 185-209.
12. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497.
13. Miller, J. H. (1972). Experiments in Molecular Genetics. New York: Cold Spring Harbor Laboratory Press.
14. Okada, N. & Nishimura, S. (1979). J. Biol. Chem. 254, 3061-3066.
15. Okada, N., Noguchi, S., Kasai, H., Shindo-Okada, N., Ohgi, T., Goto, T. & Nishimura, S. (1979). J. Biol. Chem. 254, 3067-3073.
16. Perrakis, A., Cipriani, R, Castagna, J.-C., Claustre, L., Burghammer, M., Riekel, C. & Cusack, S. (1999). Acta Cryst. D55, 1765-1770.
17. Powell, H. R. (1999). Acta Cryst. D55, 1690-1695.
18. Reuter, K. & Ficner, R. (1995). J. Bacteriol. 177, 5284-5288.
19. Reuter, K., Slany, R., Ullrich, F. & Kersten, H. (1991). J. Bacteriol. 173, 2256-2264.
20. Romier, C, Ficner, R., Reuter, K. & Suck, D. (1996). Proteins Struct. Funct. Genet. 24, 516-519.
21. Romier, C., Reuter, K., Suck, D. & Ficner, R. (1996a). EMBO J. 15, 2850-2857.
22. Romier, C., Reuter, K., Suck, D. & Ficner, R. (1996b). Biochemistry, 35, 15734-15739.
23. Slany, R. K., Bösl, M., Crain, P. F. & Kersten, H. (1993). Biochemistry, 32, 7811-7817.
24. Slany, R. K. & Kersten, H. (1994). Biochimie, 76, 1178-1182.
25. Smith, D. B. & Johnson, K. S. (1988). Gene, 67, 31-40.
26. Steller, I., Bolotovsky, R. & Rossmann, M. G. (1997). J. Appl. Cryst. 30, 1036-1040.