-
1
-
-
0022337674
-
An invertible element of DNA controls phase variation of type I fimbriae of Escherichia coli
-
Abraham, J. M., C. S. Freitag, J. R. Clements, and B. I. Eisenstein. 1985. An invertible element of DNA controls phase variation of type I fimbriae of Escherichia coli. Proc. Natl. Acad. Sci. USA 82:5724-5727.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 5724-5727
-
-
Abraham, J.M.1
Freitag, C.S.2
Clements, J.R.3
Eisenstein, B.I.4
-
2
-
-
0026586392
-
Evidence for the second conserved arginine residue in the integrase family of site-specific recombination proteins
-
Abremski, K. E., and R. H. Hoess. 1992. Evidence for the second conserved arginine residue in the integrase family of site-specific recombination proteins. Protein Eng. 5:87-91.
-
(1992)
Protein Eng.
, vol.5
, pp. 87-91
-
-
Abremski, K.E.1
Hoess, A.R.H.2
-
3
-
-
0022669622
-
The integrase family of site-specific recombinases: Regional similarities and global diversity
-
Argos, P., A. Landy, K. Abremski, J. B. Egan, E. Haggard-Ljundquist, R. H. Hoess, M. L. Kahn, B. Kalionis, S. V. L. Narayana, L. S. Pierson, N. Sternberg, and J. M. Leong. 1986. The integrase family of site-specific recombinases: regional similarities and global diversity. EMBO J. 5:433-440.
-
(1986)
EMBO J.
, vol.5
, pp. 433-440
-
-
Argos, P.1
Landy, A.2
Abremski, K.3
Egan, J.B.4
Haggard-Ljundquist, E.5
Hoess, R.H.6
Kahn, M.L.7
Kalionis, B.8
Narayana, S.V.L.9
Pierson, L.S.10
Sternberg, N.11
Leong, J.M.12
-
4
-
-
0004270170
-
-
John Wiley and Sons, New York, N.Y.
-
Ausubel, F. M., R. Brent, R. E. Kingston, J. G. Seidman, D. D. Smith, and K. Struhl. 1987. Current protocols in molecular biology. John Wiley and Sons, New York, N.Y.
-
(1987)
Current Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Seidman, J.G.4
Smith, D.D.5
Struhl, K.6
-
5
-
-
0022509196
-
Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coli
-
Biek, D. P., and S. N. Cohen. 1986. Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coli. J. Bacteriol. 167:594-603.
-
(1986)
J. Bacteriol.
, vol.167
, pp. 594-603
-
-
Biek, D.P.1
Cohen, S.N.2
-
6
-
-
0027422093
-
Two related recombinases are required for site-specific recombination at dif and cer in E. coli K-12
-
Blakely, G., G. May, R. McCullough, L. K. Arciszewska, M. Burke, S. T. Lovett, and D. J. Sherratt. 1993. Two related recombinases are required for site-specific recombination at dif and cer in E. coli K-12. Cell 75:351-361.
-
(1993)
Cell
, vol.75
, pp. 351-361
-
-
Blakely, G.1
May, G.2
McCullough, R.3
Arciszewska, L.K.4
Burke, M.5
Lovett, S.T.6
Sherratt, D.J.7
-
7
-
-
0027459923
-
Lrp stimulates phase variation of type 1 fimbriae in Escherichia coli K-12
-
Blomfield, I. C., P. J. Calie, K. J. Eberhardt, M. S. McClain, and B. I. Eisenstein. 1993. Lrp stimulates phase variation of type 1 fimbriae in Escherichia coli K-12. J. Bacteriol. 175:27-36.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 27-36
-
-
Blomfield, I.C.1
Calie, P.J.2
Eberhardt, K.J.3
McClain, M.S.4
Eisenstein, B.I.5
-
8
-
-
0033546116
-
A newly identified, essential catalytic residue in a critical secondary structure clement in the integrase family of site-specific recombinases is conserved in a similar element in eucaryotic type IB topoisomerases
-
Cao, Y., and F. Hayes. 1999. A newly identified, essential catalytic residue in a critical secondary structure clement in the integrase family of site-specific recombinases is conserved in a similar element in eucaryotic type IB topoisomerases. J. Mol. Biol. 289:517-527.
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 517-527
-
-
Cao, Y.1
Hayes, F.2
-
9
-
-
0026641669
-
Functional analysis of box I mutations in yeast site-specific recombinases Flp and R: Pairwise complementation with recombinase variants lacking the active site tyrosine
-
Chen, J.-W., B. R. Evans, S.-H. Yang, H. Araki, Y. Oshima, and M. Jayaram. 1992. Functional analysis of box I mutations in yeast site-specific recombinases Flp and R: pairwise complementation with recombinase variants lacking the active site tyrosine. Mol. Cell. Biol. 12:3757-3765.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 3757-3765
-
-
Chen, J.-W.1
Evans, B.R.2
Yang, S.-H.3
Araki, H.4
Oshima, Y.5
Jayaram, M.6
-
10
-
-
0030663865
-
Promoter-specific repression of fimB expression by the Escherichia coli nucleoid-associated protein H-NS
-
Donato, G. M., M. J. Lelivelt, and T. H. Kawula. 1997. Promoter-specific repression of fimB expression by the Escherichia coli nucleoid-associated protein H-NS. J. Bacteriol. 179:6618-6625.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6618-6625
-
-
Donato, G.M.1
Lelivelt, M.J.2
Kawula, T.H.3
-
11
-
-
0023640638
-
Fimbrial phase variation in Escherichia coli: Dependence on integration host factor and homologies with other site-specific recombinases
-
Dorman, C. J., and C. F. Higgins. 1987. Fimbrial phase variation in Escherichia coli: dependence on integration host factor and homologies with other site-specific recombinases. J. Bacteriol. 169:3840-3843.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 3840-3843
-
-
Dorman, C.J.1
Higgins, C.F.2
-
12
-
-
0028073705
-
The site-specific recombination system regulating expression of the type 1 fimbrial subunit gene of Escherichia coli is sensitive to changes in DNA supercoiling
-
Dove, S. L., and C. J. Dorman. 1994. The site-specific recombination system regulating expression of the type 1 fimbrial subunit gene of Escherichia coli is sensitive to changes in DNA supercoiling. Mol. Microbiol. 14:975-988.
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 975-988
-
-
Dove, S.L.1
Dorman, C.J.2
-
13
-
-
0029828216
-
Multicopy fimB gene expression in Escherichia coli: Binding to inverted repeats in vivo, effect on fimA gene transcription and DNA inversion
-
Dove, S. L., and C. J. Dorman. 1996. Multicopy fimB gene expression in Escherichia coli: binding to inverted repeats in vivo, effect on fimA gene transcription and DNA inversion. Mol. Microbiol. 21:1161-1173.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 1161-1173
-
-
Dove, S.L.1
Dorman, C.J.2
-
14
-
-
0023404815
-
Integration host factor is required for the DNA inversion that controls phase variation in Escherichia coli
-
Eisenstein, B. I., D. S. Sweet, V. Vaughn, and D. I. Friedman. 1987. Integration host factor is required for the DNA inversion that controls phase variation in Escherichia coli. Proc. Natl. Acad. Sci. USA 84:6506-6510.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 6506-6510
-
-
Eisenstein, B.I.1
Sweet, D.S.2
Vaughn, V.3
Friedman, D.I.4
-
15
-
-
0030816550
-
The integrase family of tyrosine recombinases: Evolution of a conserved active site domain
-
Esposito, D., and J. J. Scocca. 1997. The integrase family of tyrosine recombinases: evolution of a conserved active site domain. Nucleic Acids Res. 25:3605-3614.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3605-3614
-
-
Esposito, D.1
Scocca, J.J.2
-
16
-
-
0027439272
-
Environmental regulation of the fim switch conlrolling type 1 fimbrial phase variation in Escherichia coli K-12: Effects of temperature and media
-
Gally, D. L., J. A. Bogan, B. I. Eisenstein, and I. C. Blomfield. 1993. Environmental regulation of the fim switch conlrolling type 1 fimbrial phase variation in Escherichia coli K-12: effects of temperature and media. J. Bacteriol. 175:6186-6193.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 6186-6193
-
-
Gally, D.L.1
Bogan, J.A.2
Eisenstein, B.I.3
Blomfield, I.C.4
-
17
-
-
0029786143
-
Interaction of FimB and FimE with the fim switch that controls the phase variation of type 1 fimbriae in Escherichia coli K-12
-
Gally, D. L., J. Leathart, and I. C. Blomfield. 1996. Interaction of FimB and FimE with the fim switch that controls the phase variation of type 1 fimbriae in Escherichia coli K-12. Mol. Micrbiol. 21:725-738.
-
(1996)
Mol. Micrbiol.
, vol.21
, pp. 725-738
-
-
Gally, D.L.1
Leathart, J.2
Blomfield, I.C.3
-
18
-
-
0032589787
-
The integrase family of recombinases: Organization and function of the active site
-
Grainge, I., and M. Jayaram. 1999. The integrase family of recombinases: organization and function of the active site. Mol. Microbiol. 33:449-456.
-
(1999)
Mol. Microbiol.
, vol.33
, pp. 449-456
-
-
Grainge, I.1
Jayaram, M.2
-
19
-
-
0031683105
-
Point mutations in the integron integrase Intl1 that affect recombination and/or substrate recognition
-
Gravel, A., N. Messier, and P. H. Roy. 1998. Point mutations in the integron integrase Intl1 that affect recombination and/or substrate recognition. J. Bacteriol. 180:5437-5442.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5437-5442
-
-
Gravel, A.1
Messier, N.2
Roy, P.H.3
-
20
-
-
0030886293
-
Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse
-
Guo, F., D. N. Gopaul, and G. D. van Duyne. 1997. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Nature 389:40-46.
-
(1997)
Nature
, vol.389
, pp. 40-46
-
-
Guo, F.1
Gopaul, D.N.2
Van Duyne, G.D.3
-
21
-
-
0032881595
-
Molecular switches - The ON and OFF of bacterial phase variation
-
Henderson, I. R., P. Owen, and J. P. Nataro. 1949. Molecular switches - the ON and OFF of bacterial phase variation. Mol. Microbiol. 33:919-932.
-
(1949)
Mol. Microbiol.
, vol.33
, pp. 919-932
-
-
Henderson, I.R.1
Owen, P.2
Nataro, J.P.3
-
22
-
-
0030904786
-
Molecular organization in site-specific recombination: The catalytic domain of bacteriophage HP1 integrase at 2.7 Å resolution
-
Hickman, A. B., S. Waninger, J. J. Scocca, and F. Dyda. 1997. Molecular organization in site-specific recombination: the catalytic domain of bacteriophage HP1 integrase at 2.7 Å resolution. Cell 89:227-237.
-
(1997)
Cell
, vol.89
, pp. 227-237
-
-
Hickman, A.B.1
Waninger, S.2
Scocca, J.J.3
Dyda, F.4
-
23
-
-
0023833060
-
A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli
-
Higgins, C. F., C. J. Dorman, D. A. Stirling, L. Waddell, I. R. Booth, G. May, and E. Bremer. 1988. A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli. Cell 52:569-584.
-
(1988)
Cell
, vol.52
, pp. 569-584
-
-
Higgins, C.F.1
Dorman, C.J.2
Stirling, D.A.3
Waddell, L.4
Booth, I.R.5
May, G.6
Bremer, E.7
-
24
-
-
0025766648
-
Rapid site-specific DNA inversion in Escherichia coli mutants lacking the histonelike protein H-NS
-
Kawula, T. H., and P. E. Orndorff. 1991. Rapid site-specific DNA inversion in Escherichia coli mutants lacking the histonelike protein H-NS. J. Bacteriol. 173:4116-4123.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 4116-4123
-
-
Kawula, T.H.1
Orndorff, P.E.2
-
25
-
-
0022731677
-
Two regulatory fim genes, fimB and fimE, control the phase variation of type 1 fimbriae in Escherichia coli
-
Klemm, P. 1986. Two regulatory fim genes, fimB and fimE, control the phase variation of type 1 fimbriae in Escherichia coli. EMBO J. 5:1389-1393.
-
(1986)
EMBO J.
, vol.5
, pp. 1389-1393
-
-
Klemm, P.1
-
26
-
-
0033059806
-
The molecular basis for the specificity of fimE in the phase variation of type I fimbriae of Escherichia coli K-12
-
Kulasekara, H. D., and I. C. Blomfield. 1994. The molecular basis for the specificity of fimE in the phase variation of type I fimbriae of Escherichia coli K-12. Mol. Microbiol. 31:1171-1181.
-
(1994)
Mol. Microbiol.
, vol.31
, pp. 1171-1181
-
-
Kulasekara, H.D.1
Blomfield, I.C.2
-
27
-
-
0001656001
-
Flexibility in DNA recombination: Structure of the lambda integrase catalytic core
-
Kwon, H. J., R. Tirumalai, A. Landy, and T. Ellenberger. 1997. Flexibility in DNA recombination: structure of the lambda integrase catalytic core. Science 276:126-131.
-
(1997)
Science
, vol.276
, pp. 126-131
-
-
Kwon, H.J.1
Tirumalai, R.2
Landy, A.3
Ellenberger, T.4
-
28
-
-
0029971048
-
Genetic analysis of the bacteriophage λ attL nucleoprotein complex
-
MacWilliams, M. P., R. I. Gumport, and J. F. Gardner. 1996. Genetic analysis of the bacteriophage λ attL nucleoprotein complex. Genetics 143: 1069-1079.
-
(1996)
Genetics
, vol.143
, pp. 1069-1079
-
-
MacWilliams, M.P.1
Gumport, R.I.2
Gardner, J.F.3
-
30
-
-
0038659759
-
Similarities and differences among 105 members of the Int family of site-specific recombinases
-
Nunes-Düby, S. E., H. J. Kwon, R. S. Tirumalai, T. Ellenberger, and A. Landy. 1998, Similarities and differences among 105 members of the Int family of site-specific recombinases. Nucleic Acids Res. 26:391-406.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 391-406
-
-
Nunes-Düby, S.E.1
Kwon, H.J.2
Tirumalai, R.S.3
Ellenberger, T.4
Landy, A.5
-
31
-
-
0034058828
-
Effects of local transcription and H-NS on inversion of the fim switch of Escherichia coli
-
in press
-
O'Gara, J. P., and C. J. Dorman. Effects of local transcription and H-NS on inversion of the fim switch of Escherichia coli. Mol. Microbiol., in press.
-
Mol. Microbiol.
-
-
O'Gara, J.P.1
Dorman, C.J.2
-
32
-
-
0024278670
-
Suicide recombination substrates yield covalent λ integrase-DNA complexes and lead to identification of the active site tyrosine
-
Pargellis, C. A., S. E. Nunes-Düby, L. Moitoso de Vargas, and A. Landy. 1988. Suicide recombination substrates yield covalent λ integrase-DNA complexes and lead to identification of the active site tyrosine. J. Mol. Biol. 263:7678-7685.
-
(1988)
J. Mol. Biol.
, vol.263
, pp. 7678-7685
-
-
Pargellis, C.A.1
Nunes-Düby, S.E.2
Moitoso De Vargas, L.3
Landy, A.4
-
33
-
-
0025264936
-
Functional analysis of Arg-308 mutants of Flp recombinase
-
Parsons, R. L., B. R. Evans, L. Zheng, and M. Jayaram. 1990. Functional analysis of Arg-308 mutants of Flp recombinase. J. Biol. Chem. 265:4527-4533.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 4527-4533
-
-
Parsons, R.L.1
Evans, B.R.2
Zheng, L.3
Jayaram, M.4
-
34
-
-
0023322410
-
Mutations in the 2-μm circle site-specilic recombinase that abolish recombination without affecting substrate recognition
-
Prasad, P. V., L.-J. Young, and M. Jayaram. 1987. Mutations in the 2-μm circle site-specilic recombinase that abolish recombination without affecting substrate recognition. Proc. Natl. Acad. Sci. USA 84:2189-2193.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 2189-2193
-
-
Prasad, P.V.1
Young, L.-J.2
Jayaram, M.3
-
35
-
-
0031893034
-
Leucine alters the interaction of the leucine-responsive regulatory protein (Lrp) with the fim switch to stimulate site-specific recombination in Escherichia coli
-
Roesch, P. L., and I. C. Blomfield. 1998. Leucine alters the interaction of the leucine-responsive regulatory protein (Lrp) with the fim switch to stimulate site-specific recombination in Escherichia coli. Mol. Microbiol. 27:751-761.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 751-761
-
-
Roesch, P.L.1
Blomfield, I.C.2
-
36
-
-
0004136246
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
37
-
-
0031691913
-
Orientation-dependent enhancement by H-NS of the activity of the type 1 fimbrial phase switch promoter in Escherichia coli
-
Schembri, M. A., P. B. Olsen, and P. Klemm. 1998. Orientation-dependent enhancement by H-NS of the activity of the type 1 fimbrial phase switch promoter in Escherichia coli. Mol. Gen. Genet. 259:336-344.
-
(1998)
Mol. Gen. Genet.
, vol.259
, pp. 336-344
-
-
Schembri, M.A.1
Olsen, P.B.2
Klemm, P.3
-
38
-
-
0033451892
-
Functional analysis of the FimE integrase of Escherichia coli K-12: Isolation of mutant derivatives with altered DNA inversion preferences
-
Smith, S. G. J., and C. J. Dorman. 1999. Functional analysis of the FimE integrase of Escherichia coli K-12: isolation of mutant derivatives with altered DNA inversion preferences. Mol. Microbiol. 34:965-979.
-
(1999)
Mol. Microbiol.
, vol.34
, pp. 965-979
-
-
Smith, S.G.J.1
Dorman, C.J.2
-
39
-
-
0030817595
-
Crystal structure of the site-specific recombinase, XerD
-
Subramanya, H. S., L. K. Arciszewska. R. A. Baker, L. E. Bird, D. J. Sherratt, and D. B. Wigley. 1997. Crystal structure of the site-specific recombinase, XerD. EMBO J. 16:5178-5187.
-
(1997)
EMBO J.
, vol.16
, pp. 5178-5187
-
-
Subramanya, H.S.1
Arciszewska, L.K.2
Baker, R.A.3
Bird, L.E.4
Sherratt, D.J.5
Wigley, D.B.6
-
40
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M 13mp18 and pUC19 vectors
-
Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M 13mp18 and pUC19 vectors. Gene 33:103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
|