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Volumn 16, Issue 1, 2000, Pages 67-76

Identification of subdominant cytotoxic T lymphocyte epitopes encoded by autologous HIV type 1 sequences, using dendritic cell stimulation and computer-driven algorithm

Author keywords

[No Author keywords available]

Indexed keywords

CHROMIUM 51; EPITOPE; HLA B7 ANTIGEN; VIRUS DNA;

EID: 0033986385     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/088922200309610     Document Type: Article
Times cited : (30)

References (40)
  • 1
    • 0028041344 scopus 로고
    • Virus-specific CD8+ cytotoxic T-lymphocyte activity associated with control of viremia in primary human immunodeficiency virus type 1 infection
    • 1. Borrow P, Lewicki H, Hahn BH, Shaw GM, and Oldstone MB: Virus-specific CD8+ cytotoxic T-lymphocyte activity associated with control of viremia in primary human immunodeficiency virus type 1 infection. J Virol 1994;68:6103-6110.
    • (1994) J Virol , vol.68 , pp. 6103-6110
    • Borrow, P.1    Lewicki, H.2    Hahn, B.H.3    Shaw, G.M.4    Oldstone, M.B.5
  • 2
    • 0029880783 scopus 로고    scopus 로고
    • Cytotoxic T lymphocytes in asymptomatic long-term nonprogressing HIV-1 infection breadth and specificity of the response and relation to in vivo viral quasispecies in a person with prolonged infection and low viral load
    • 2. Harrer T, Harrer E, Kalams SA, Barbosa P, Trocha A, Johnson RP, Elbeik T, Feinberg MB, Buchbinder SP, and Walker BD: Cytotoxic T lymphocytes in asymptomatic long-term nonprogressing HIV-1 infection Breadth and specificity of the response and relation to in vivo viral quasispecies in a person with prolonged infection and low viral load. J Immunol 1996;156:2616-2623.
    • (1996) J Immunol , vol.156 , pp. 2616-2623
    • Harrer, T.1    Harrer, E.2    Kalams, S.A.3    Barbosa, P.4    Trocha, A.5    Johnson, R.P.6    Elbeik, T.7    Feinberg, M.B.8    Buchbinder, S.P.9    Walker, B.D.10
  • 4
    • 0028337166 scopus 로고
    • Temporal association of cellular immune response with the initial control of viremia in primary HIV-1 syndrome
    • 4. Koup RA, Safrit JT, Cao Y, Andrews CA, McLeod G, Borkowsky W, Farthing C, and Ho DD: Temporal association of cellular immune response with the initial control of viremia in primary HIV-1 syndrome. J Virol 1994;68:4650-4655.
    • (1994) J Virol , vol.68 , pp. 4650-4655
    • Koup, R.A.1    Safrit, J.T.2    Cao, Y.3    Andrews, C.A.4    McLeod, G.5    Borkowsky, W.6    Farthing, C.7    Ho, D.D.8
  • 9
    • 0032888972 scopus 로고    scopus 로고
    • Strong human immunodeficiency virus (HIV)-specific cytotoxic T lymphocyte activity in Sydney Blood Bank Cohort patients infected with nef-defective HIV type 1
    • 9. Dyer WB, Ogg GS, Demoitie M-A, Jin X, Geczy AF, Rowland-Jones S, McMichael AJ, Nixon DF, and Sullivan JS: Strong human immunodeficiency virus (HIV)-specific cytotoxic T lymphocyte activity in Sydney Blood Bank Cohort patients infected with nef-defective HIV type 1. J Virol 1999;73:436-443.
    • (1999) J Virol , vol.73 , pp. 436-443
    • Dyer, W.B.1    Ogg, G.S.2    Demoitie, M.-A.3    Jin, X.4    Geczy, A.F.5    Rowland-Jones, S.6    McMichael, A.J.7    Nixon, D.F.8    Sullivan, J.S.9
  • 10
    • 0029066338 scopus 로고
    • Two novel T cell epitope prediction algorithms based on MHC-binding motifs: Comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences
    • 10. Gabriel EM, Roberts CGP, Berzofsky JA, and DeGroot AS: Two novel T cell epitope prediction algorithms based on MHC-binding motifs: Comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences. Vaccine 1995;13:581-591.
    • (1995) Vaccine , vol.13 , pp. 581-591
    • Gabriel, E.M.1    Roberts, C.G.P.2    Berzofsky, J.A.3    DeGroot, A.S.4
  • 11
    • 0030890660 scopus 로고    scopus 로고
    • An interactive Web site providing major histocompatibility ligand predictions: Application to HIV research
    • 11. DeGroot AS, Jesdale BM, Szu E, Schafer JR, Chicz RM, and Deocampo G: An interactive Web site providing major histocompatibility ligand predictions: Application to HIV research. AIDS Res Hum Retroviruses 1997;13:529-531.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 529-531
    • DeGroot, A.S.1    Jesdale, B.M.2    Szu, E.3    Schafer, J.R.4    Chicz, R.M.5    Deocampo, G.6
  • 12
    • 0025735629 scopus 로고
    • The dendritic cells system and its role in immunogenicity
    • 12. Steinman RM: The dendritic cells system and its role in immunogenicity. Annu Rev Immunol 1991;9:271.
    • (1991) Annu Rev Immunol , vol.9 , pp. 271
    • Steinman, R.M.1
  • 13
    • 0032546352 scopus 로고    scopus 로고
    • Dendritic cells and the control of immunity
    • 13. Banchereau J and Steinman RM: Dendritic cells and the control of immunity. Nature (London) 1998;392:245-252.
    • (1998) Nature (London) , vol.392 , pp. 245-252
    • Banchereau, J.1    Steinman, R.M.2
  • 14
    • 0030603986 scopus 로고    scopus 로고
    • Improved methods for the generation of dendritic cells from nonproliferating progenitors in human blood
    • 14. Bender A, Sapp M, Schuler G, Steinman RM, and Bhardwaj N: Improved methods for the generation of dendritic cells from nonproliferating progenitors in human blood. J Immunol Methods 1996;196:121-135.
    • (1996) J Immunol Methods , vol.196 , pp. 121-135
    • Bender, A.1    Sapp, M.2    Schuler, G.3    Steinman, R.M.4    Bhardwaj, N.5
  • 15
    • 0030603987 scopus 로고    scopus 로고
    • Generation of mature dendritic cells from human blood: An improved method with special regard to clinical applicability
    • 15. Romani N, Reider D, Heuer M, Ebner S, Kampgen E, Eibl B, Niederwieser D, and Schuler G: Generation of mature dendritic cells from human blood: An improved method with special regard to clinical applicability. J Immunol Methods 1996;196:137-151.
    • (1996) J Immunol Methods , vol.196 , pp. 137-151
    • Romani, N.1    Reider, D.2    Heuer, M.3    Ebner, S.4    Kampgen, E.5    Eibl, B.6    Niederwieser, D.7    Schuler, G.8
  • 16
    • 0028083227 scopus 로고
    • Influenza virus-infected dendritic cells stimulate strong proliferative and cytolytic responses from human CD8+ T-cells
    • 16. Bhardwaj N, Bender A, Gonzalez N, Bui LK, Garrett MC, and Steinman RM: Influenza virus-infected dendritic cells stimulate strong proliferative and cytolytic responses from human CD8+ T-cells. J Clin Invest 1994;94:797-807.
    • (1994) J Clin Invest , vol.94 , pp. 797-807
    • Bhardwaj, N.1    Bender, A.2    Gonzalez, N.3    Bui, L.K.4    Garrett, M.C.5    Steinman, R.M.6
  • 17
    • 0033011902 scopus 로고    scopus 로고
    • Dendritic cells generated from blood monocytes of HIV-1 patients are not infected and act as competent antigen presenting cells eliciting potent T-cell responses
    • 17. Sapp M, Engelmayer J, Larsson M, Granelli-Piperno A, Steinman RM, and Bhardwaj N: Dendritic cells generated from blood monocytes of HIV-1 patients are not infected and act as competent antigen presenting cells eliciting potent T-cell responses. Immunol Lett 1999;66:121-128.
    • (1999) Immunol Lett , vol.66 , pp. 121-128
    • Sapp, M.1    Engelmayer, J.2    Larsson, M.3    Granelli-Piperno, A.4    Steinman, R.M.5    Bhardwaj, N.6
  • 18
    • 0029839058 scopus 로고    scopus 로고
    • Dendritic cells pulsed with RNA are potent antigen-presenting cells in vitro and in vivo
    • 18. Boczkowski D, Nair SK, Snyder D, and Gilboa E: Dendritic cells pulsed with RNA are potent antigen-presenting cells in vitro and in vivo. J Exp Med 1996;184:465-472.
    • (1996) J Exp Med , vol.184 , pp. 465-472
    • Boczkowski, D.1    Nair, S.K.2    Snyder, D.3    Gilboa, E.4
  • 19
    • 0029810418 scopus 로고    scopus 로고
    • Peptide-pulsed dendritic cells induce tumoricidal cytotoxic T lymphocytes from healthy donors against stable HLA-A*0201-binding peptides from the Melan-A/MART-1 self antigen
    • 19. van Elsas A, van der Burg SH, van der Minne CE, Borghi M, Mourer JS, Melief CJM, and Schrier PI: Peptide-pulsed dendritic cells induce tumoricidal cytotoxic T lymphocytes from healthy donors against stable HLA-A*0201-binding peptides from the Melan-A/MART-1 self antigen. Eur J Immunol 1996;26:1683-1689.
    • (1996) Eur J Immunol , vol.26 , pp. 1683-1689
    • Van Elsas, A.1    Van Der Burg, S.H.2    Van Der Minne, C.E.3    Borghi, M.4    Mourer, J.S.5    Melief, C.J.M.6    Schrier, P.I.7
  • 20
    • 0031020905 scopus 로고    scopus 로고
    • Allogeneic dendritic cell induction of HIV-specific cytotoxic T lymphocyte responses from T cells of HIV type 1-infected and uninfected individuals
    • 20. Dupuis M, Peshwa MV, Benike C, Kundu SK, Engleman EG, Van Schooten WCA, and Merigan TC: Allogeneic dendritic cell induction of HIV-specific cytotoxic T lymphocyte responses from T cells of HIV type 1-infected and uninfected individuals. AIDS Res Hum Retroviruses 1997;13:33-39.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 33-39
    • Dupuis, M.1    Peshwa, M.V.2    Benike, C.3    Kundu, S.K.4    Engleman, E.G.5    Van Schooten, W.C.A.6    Merigan, T.C.7
  • 21
    • 0028840343 scopus 로고
    • Inactivated influenza virus, when presented on dendritic cells, elicits human CD8+ cytolytic T cell responses
    • 21. Bender A, Bui LK, Feldman MA, Larsson M, and Bhardwaj N: Inactivated influenza virus, when presented on dendritic cells, elicits human CD8+ cytolytic T cell responses. J Exp Med 1995; 182:1663-1671.
    • (1995) J Exp Med , vol.182 , pp. 1663-1671
    • Bender, A.1    Bui, L.K.2    Feldman, M.A.3    Larsson, M.4    Bhardwaj, N.5
  • 22
    • 0028847578 scopus 로고
    • Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection
    • 22. Cao Y, Qin L, Zhang L, Safrit J, and Ho DD: Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection. N Engl J Med 1995;332: 201-208.
    • (1995) N Engl J Med , vol.332 , pp. 201-208
    • Cao, Y.1    Qin, L.2    Zhang, L.3    Safrit, J.4    Ho, D.D.5
  • 23
    • 0028908766 scopus 로고
    • Characterization of nef sequences in long-term survivors of human immunodeficiency virus type 1 infection
    • 23. Huang Y, Zhang L, and Ho DD: Characterization of nef sequences in long-term survivors of human immunodeficiency virus type 1 infection. J Virol 1995;69:93-100.
    • (1995) J Virol , vol.69 , pp. 93-100
    • Huang, Y.1    Zhang, L.2    Ho, D.D.3
  • 24
    • 0030974504 scopus 로고    scopus 로고
    • Genotypic and phenotypic characterization of long terminal repeat from long-term survivors of human immunodeficiency virus type 1 infection
    • 24. Zhang L, Huang Y, Yuan H, Chen BK, Ip J, and Ho DD: Genotypic and phenotypic characterization of long terminal repeat from long-term survivors of human immunodeficiency virus type 1 infection. J Virol 1997;71:5608-5613.
    • (1997) J Virol , vol.71 , pp. 5608-5613
    • Zhang, L.1    Huang, Y.2    Yuan, H.3    Chen, B.K.4    Ip, J.5    Ho, D.D.6
  • 25
    • 0029985197 scopus 로고    scopus 로고
    • Macrophages and CD4+ T-lymphocytes from two multiply exposed uninfected individuals resist infection with primary NSI isolates of human immunodeficiency virus type 1
    • 25. Connor R, Paxton WA, Sheridan KE, and Koup RA: Macrophages and CD4+ T-lymphocytes from two multiply exposed uninfected individuals resist infection with primary NSI isolates of human immunodeficiency virus type 1. J Virol 1996;70:8758-8764.
    • (1996) J Virol , vol.70 , pp. 8758-8764
    • Connor, R.1    Paxton, W.A.2    Sheridan, K.E.3    Koup, R.A.4
  • 26
    • 0032484475 scopus 로고    scopus 로고
    • Characterization of gag and pol sequences from long-term survivors of human immunodeficiency virus type 1 infection
    • 26. Huang Y, Zhang L, and Ho DD: Characterization of gag and pol sequences from long-term survivors of human immunodeficiency virus type 1 infection. Virology 1998;240:36-49.
    • (1998) Virology , vol.240 , pp. 36-49
    • Huang, Y.1    Zhang, L.2    Ho, D.D.3
  • 27
    • 0032543212 scopus 로고    scopus 로고
    • Protective immunity does not correlate with the hierarchy of virus-specific cytotoxic T cell responses to naturally processed peptides
    • 27. Gallimore A, Dumrese T, Hangartner H, Zinkernagel RM, and Rammensee HG: Protective immunity does not correlate with the hierarchy of virus-specific cytotoxic T cell responses to naturally processed peptides. J Exp Med 1998;187:1647-1657.
    • (1998) J Exp Med , vol.187 , pp. 1647-1657
    • Gallimore, A.1    Dumrese, T.2    Hangartner, H.3    Zinkernagel, R.M.4    Rammensee, H.G.5
  • 28
    • 0027403718 scopus 로고
    • Quantitative analysis of the human immunodeficiency virus type 1 (HIV-1)-specific cytotoxic T lymphocyte (CTL) response at different stages of HIV-1 infection: Differential CTL responses to HIV-1 and Epstein Barr virus in late disease
    • 28. Carmichael A, Jin X, Sissons P, and Borysiewicz L: Quantitative analysis of the human immunodeficiency virus type 1 (HIV-1)-specific cytotoxic T lymphocyte (CTL) response at different stages of HIV-1 infection: Differential CTL responses to HIV-1 and Epstein Barr virus in late disease. J Exp Med 1993;177:249-256.
    • (1993) J Exp Med , vol.177 , pp. 249-256
    • Carmichael, A.1    Jin, X.2    Sissons, P.3    Borysiewicz, L.4
  • 32
  • 33
    • 0029152771 scopus 로고
    • Amino-terminal alteration of the HLA-A*0201-restricted human immunodeficiency virus Pol peptide increases complex stability and in vitro immunogenicity
    • 33. Pogue RR, Eron F, Frelinger JA, and Matsui M: Amino-terminal alteration of the HLA-A*0201-restricted human immunodeficiency virus Pol peptide increases complex stability and in vitro immunogenicity. Proc Natl Acad Sci USA 1995;92:8166-8170.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 8166-8170
    • Pogue, R.R.1    Eron, F.2    Frelinger, J.A.3    Matsui, M.4
  • 34
    • 0027525106 scopus 로고
    • The antigenic identity of peptide-MHC complexes: A comparison of the conformation of five viral peptides presented by HLA-A2
    • 34. Madden DR, Garboczi DN, and Wiley DC: The antigenic identity of peptide-MHC complexes: A comparison of the conformation of five viral peptides presented by HLA-A2. Cell 1993;75:693-708.
    • (1993) Cell , vol.75 , pp. 693-708
    • Madden, D.R.1    Garboczi, D.N.2    Wiley, D.C.3
  • 35
    • 0025813156 scopus 로고
    • The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation
    • 35. Madden DR, Gorga JC, Strominger JL, and Wiley DC: The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation. Nature (London) 1991;353:321-325.
    • (1991) Nature (London) , vol.353 , pp. 321-325
    • Madden, D.R.1    Gorga, J.C.2    Strominger, J.L.3    Wiley, D.C.4
  • 37
    • 0030846020 scopus 로고    scopus 로고
    • Cytotoxic T lymphocyte cross-reactivity among different human immunodeficiency virus type 1 clades: Implications for vaccine development
    • 37. Cao H, Kanki P, Sankale JL, Dieng-Sarr A, Mazzara GP, Kalams SA, Korber B, Mboup S, and Walker BD: Cytotoxic T lymphocyte cross-reactivity among different human immunodeficiency virus type 1 clades: Implications for vaccine development. J Virol 1997;71:8615-8623.
    • (1997) J Virol , vol.71 , pp. 8615-8623
    • Cao, H.1    Kanki, P.2    Sankale, J.L.3    Dieng-Sarr, A.4    Mazzara, G.P.5    Kalams, S.A.6    Korber, B.7    Mboup, S.8    Walker, B.D.9
  • 38
    • 0031000023 scopus 로고    scopus 로고
    • Early HIV-1 envelope-specific cytotoxic T lymphocyte responses in vertically infected infants
    • 38. Pikora CA, Sullivan JL, Panicali D, and Luzuriaga K: Early HIV-1 envelope-specific cytotoxic T lymphocyte responses in vertically infected infants. J Exp Med 1997;185:1153-1161.
    • (1997) J Exp Med , vol.185 , pp. 1153-1161
    • Pikora, C.A.1    Sullivan, J.L.2    Panicali, D.3    Luzuriaga, K.4
  • 39
    • 0029967942 scopus 로고    scopus 로고
    • Analysis of the human env-specific cytotoxic T lymphocyte (CTL) response in natural human immunodeficiency virus type 1 infection: Low prevalence of broadly cross-reactive Env-specific CTL
    • 39. Carmichael A, Jin X, and Sissons P: Analysis of the human env-specific cytotoxic T lymphocyte (CTL) response in natural human immunodeficiency virus type 1 infection: Low prevalence of broadly cross-reactive Env-specific CTL. J Virol 1996;70:8468-8476.
    • (1996) J Virol , vol.70 , pp. 8468-8476
    • Carmichael, A.1    Jin, X.2    Sissons, P.3


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