The essential protein Fap7 is involved in the oxidative stress response of Saccharomyces cerevisiae

Molecular Microbiology

Volumn 35, Issue 4, 2000, Pages 936-948

  Juhnke, Holger ^a   Charizanis, Christina ^a   Latifi, Faiaz ^a   Krems, Bernhard ^a   Entian, Karl Dieter ^a  

^a GOETHE UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

GLUCOSE; GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; HYDROGEN PEROXIDE; NUCLEAR FACTOR; SODIUM CHLORIDE; TRANSCRIPTION FACTOR;

ARTICLE; CELLULAR DISTRIBUTION; CONTROLLED STUDY; FLUORESCENCE MICROSCOPY; FUNGUS GROWTH; GENE EXPRESSION REGULATION; GENE INDUCTION; NONHUMAN; OXIDATIVE STRESS; POINT MUTATION; PRIORITY JOURNAL; REPORTER GENE; SACCHAROMYCES CEREVISIAE;

AMINO ACID SEQUENCE; CELL NUCLEUS; DNA, FUNGAL; DNA-BINDING PROTEINS; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; GENES, ESSENTIAL; GENETIC COMPLEMENTATION TEST; GREEN FLUORESCENT PROTEINS; LAC OPERON; LUMINESCENT PROTEINS; MICROSCOPY, FLUORESCENCE; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEAR PROTEINS; OSMOTIC PRESSURE; OXIDATIVE STRESS; PHENOTYPE; PHOSPHORIC MONOESTER HYDROLASES; POINT MUTATION; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS;

EUKARYOTA; FUNGI; SACCHAROMYCES CEREVISIAE;

EID: 0033982075     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.2000.01768.x     Document Type: Article

References (69)

1. Ausubel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidmann, J.G., Smith, J.A., and Struhl, K. (eds) (1987) Current Protocols in Molecular Biology. New York: John Wiley and Sons.
2. Chae, H.Z., Chung, S.J., and Rhee, S.G. (1994) Thioredoxin-dependent peroxide reductase from yeast. J Biol Chem 269: 27670-27678.
3. Charizanis, C., Juhnke, H., Krems, B., and Entian, K.-D. (1999a) The oxidative stress response via Pos9/Skn7 is negatively regulated by the Ras/PKA pathway in Saccharomyces cerevisiae. Mol Gen Genet 261: 740-752.
4. Charizanis, C., Juhnke, H., Krems, B., and Entian, K.-D. (1999b) The mitochondrial cytochrome c peroxidase Ccp1 of Saccharomyces cerevisiae is involved in mediating an oxidative stress signal to the transcription factor Pos9 (Skn7). Mol Gen Genet 262: 437-447.
5. Ciriacy, M. (1975) Genetics of alcohol dehydrogenase in Saccharomyces cerevisiae. Isolation and genetic analysis of mutants. Mutat Res 29: 315-326.
6. Cormack, B.P., Valdivia, R.H., and Falkow, S. (1996) FACS-optimized mutants of the green fluorescent protein (GFP). Gene 173: 33-38.
7. Cormack, B.P., Bertram, G., Egerton, M., Gow, N.A., Falkow, S., and Brown, A.J. (1997) Yeast-enhanced green fluorescent protein (yEGFP), a reporter of gene expression in Candida albicans. Microbiology 143: 303-311.
8. De Virgilio, C., Burckert, N., Bell, W., Jeno, P., Boller, T., and Wiemken, A. (1993) Disruption of TPS2, the gene encoding the 100-kDa subunit of the trehalose-6-phosphate synthase/ phosphatase complex in Saccharomyces cerevisiae, causes accumulation of trehalose-6-phosphate and loss of trehalose-6-phosphate phosphatase activity. Eur J Biochem 212: 315-323.
9. Entian, K.-D., and Kötter, P. (1998). Yeast mutant and plasmid collections. In Methods in Microbiology. Brown, A.J.P., and Tuite, M.F. (eds). San Diego: Academic Press, pp. 431-449.
10. Farr, S.B., and Kogoma, T. (1991) Oxidative stress responses in Escherichia coli and Salmonella typhimurium. Microbiol Rev 55: 561-585.
11. Fridovich, I. (1978) The biology of oxygen radicals. Science 201: 675-880.
12. Gietz, R.D., and Sugino, A. (1988) New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74: 527-534.
13. Gorner, W., Durchschlag, E., Martínez-Pastor, M.T., Estruch, F., Ammerer, G., Hamilton, B., et al. (1998) Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity. Genes Dev 12: 586-597.
14. Gounalaki, N., and Thireos, G. (1994) Yap1p, a yeast transcriptional activator that mediates the multidrug resistance, regulates the metabolic stress response. EMBO J 13: 4036-4041.
15. Grant, C.M., Collinson, L.P., Roe, J.H., and Dawes, I.W. (1996a) Yeast glutathione reductase is required for protection against oxidative stress and is a target gene for yAP-1 transcriptional regulation. Mol Microbiol 21: 171-179.
16. Grant, C.M., Maciver, F.H., and Dawes, I.W. (1996b) Stationary-phase induction of GLR1 expression is mediated by the yAP-1 transcriptional regulatory protein in the yeast Saccharomyces cerevisiae. Mol Microbiol 22: 739-746.
17. Guarente, L. (1983) Yeast promoters and IacZ fusions designed to study expression of cloned genes in yeast. Methods Enzymol 101: 181-191.
18. Güldener, U., Heck, S., Fielder, T., Beinhauer, J., and Hegemann, J.H. (1996) A new efficient gene disruption cassette for repeated use in budding yeast. Nucleic Acids Res 24: 2519-2524.
19. Gutteridge, J.M., and Halliwell, B. (1990) The measurement and mechanism of lipid peroxidation in biological systems. Trends Biochem Sci 15: 129-135.
20. Hampsey, M. (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62: 465-503.
21. Harshman, K.D., Moye-Rowley, W.S., and Parker, C.S. (1988) Transcriptional activation by the SV40 AP-1 recognition element in yeast is mediated by a factor similar to AP-1 that is distinct from GCN4. Cell 531: 321-330.
22. Hoffman, C.S., and Winston, F. (1987) A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57: 267-272.
23. Hohmann, S., and Mager, W.H. (1997) Yeast Stress Responses. Heidelberg: Springer-Verlag.
24. Imlay, J.A., and Linn, S. (1988) DNA damage and oxygen radical toxicity. Science 240: 1302-1309.
25. Inoue, Y., Matsuda, T., Sugiyama, K., Izawa, S., and Kimura, A. (1999) Genetic analysis of glutathione peroxidase in oxidative stress response of Saccharomyces cerevisiae. J Biol Chem 17: 27002-27009.
26. Izawa, S., Inoue, Y., and Kimura, A. (1995) Oxidative stress response in yeast: effect of glutathione on adaptation to hydrogen peroxide stress in Saccharomyces cerevisiae. FEBS Lett 368: 73-76.
27. Izawa, S., Inoue, Y., and Kimura, A. (1996) Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae. Biochem J 320: 61-67.
28. Jans, D.A. (1995) The regulation of protein transport to the nucleus by phosphorylation. Biochem J 311: 705-716.
29. Jans, D.A., and Hubner, S. (1996) Regulation of protein transport to the nucleus: central role of phosphorylation. Physiol Rev 76: 651-685.
30. Jiang, Z.R., Abaigar, L.T., Huang, S.H., Cai, B., and Jong, A.Y. (1991) Molecular characterization of Saccharomyces cerevisiae URA6 gene. DNA sequence, mutagenesis analysis, and cell cycle regulation relevant to its suppression mechanism to cdc8 mutation. J Biol Chem 266: 18287-18293.
31. 2 mixed-function oxidation system. J Biol Chem 263: 4704-4711.
32. Konrad, M. (1988) Analysis and in vivo disruption of the gene coding for adenylate kinase (ADK1) in the yeast Saccharomyces cerevisiae. J Biol Chem 263: 19468-19474.
33. Krems, B., and Culotta, V.C. (1998) Molecular Biology of the Toxic Response. Puga, A., and Wallace, K.B. (eds). London, PA: Taylor and Francis, Chapter 28.
34. Krems, B., Charizanis, C., and Entian, K.-D. (1995) Mutants of Saccharomyces cerevisiae sensitive to oxidative and osmotic stress. Curr Genet 37: 427-433.
35. Krems, B., Charizanis, C., and Entian, K.-D. (1996) The response regulator-like protein Pos9/Skn7 of Saccnaromyces cerevisiae is involved in oxidative stress resistance. Curr Genet 29: 327-334.
36. Kuge, S., and Jones, N. (1994) YAP1 dependent activation of TRX2 is essential for the response of Saccharomyces cerevisiae to oxidative stress by hydroperoxides. EMBO J 13: 655-664.
37. Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
38. Lee, J., Spector, D., Godon, C., Labarre, J., and Toledano, M.B. (1999a) A new antioxidant with alkyl hydroperoxide defense properties in yeast. J Biol Chem 274: 4537-4544.
39. Lee, J., Godon, C., Lagniel, G., Spector, D., Garin, J., Labarre, J., and Toledano, M.B. (1999b) Yap1 and Skn7 control two specialized oxidative stress response regulons in yeast. J Biol Chem 274: 16040-16046.
40. Madeo, F., Fröhlich, E., Ligr, M., Grey, M., Sigrist, S.J., Wolf, D.H., and Fröhlich, K.U. (1999) Oxygen stress: a regulator of apoptosis in yeast. J Cell Biol 145: 757-767.
41. Magdolen, V., Schricker, R., Strobel, G., Germaier, H., and Bandlow, W. (1992) In vivo import of yeast adenylate kinase into mitochondria affected by site-directed mutagenesis. FEBS Lett 299: 267-272.
42. Marchler, G., Schüller, C., Adam, G., and Ruis, H. (1993) A Saccharomyces cerevisiae UAS element controlled by protein kinase A activates transcription in response to a variety of stress conditions. EMBO J 12: 1997-2003.
43. Martinez-Pastor, M.T., Marchler, G., Schuller, C., Marchler-Bauer, A., Ruis, H., and Estruch, F. (1996) The Saccharomyces cerevisiae zinc finger proteins Msn2p and Msn4p are required for transcriptional induction through the stress response element (STRE). EMBO J 15: 2227-2235.
44. Moody, C.S., and Hassan, H.M. (1982) Mutagenicity of oxygen free radicals. Proc Natl Acad Sci USA 79: 2855-2859.
45. Moradas-Ferreira, P., Costa, V., Piper, P., and Mager, W. (1996) The molecular defences against reactive oxygen species in yeast. Mol Microbiol 19: 651-658.
46. Moskvina, E., Schuller, C., Maurer, C.T., Mager, W.H., and Ruis, H. (1998) A search in the genome of Sacchammyces cerevisiae for genes regulated via stress response elements. Yeast 14: 1041-1050.
47. Mouaheb, N., Thomas, D., Verdoucq, L., Monfort, P., and Meyer, Y. (1998) In vivo functional discrimination between plant thioredoxins by heterologous expression in the yeast Saccharomyces cerevisiae. Proc Natl Acad Sci USA 95: 3312-3317.
48. Mumberg, D., Muller, R., and Funk, M. (1994) Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression. Nucleic Acids Res 22: 5767-5768.
49. Niedenthal, R., Riles, L., Johnston, M., and Hegemann, J. (1996) Green fluorescent protein as a marker for gene expression and subcellular localization in budding yeast. Yeast 12: 773-786.
50. Niederacher, D., and Entian, K.-D. (1987) Isolation and characterization of the regulatory HEX2 gene necessary for glucose repression in yeast. Mol Gen Genet 206: 505-509.
51. Ohtake, Y., and Yabuuchi, S. (1991) Molecular cloning of the gamma-glutamyl-cysteinyl synthetase gene of Sacchammyces cerevisiae. Yeast 7: 953-961.
52. Orr-Weaver, T.L., Szostak, J.W., and Rothstein, R.J. (1983) Genetic applications of yeast transformation with linear and gapped plasmids. Methods Enzymol 101: 228-245.
53. Rose, M.D., Winston, F., and Hieter, P. (1991) Methods in Yeast Genetics. A Laboratory Course Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
54. Rothstein, R. (1991) Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast. Methods Enzymol 194: 281-301.
55. Ruis, H., and Schüller, C. (1995) Stress signaling in yeast. Bioessays 17: 959-965.
56. Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, vol. 1, 3rd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
57. Saraste, M., Sibbald, P.R., and Wittinghofer, A. (1990) The P-loop - a common motif in ATP-and GTP-binding proteins. Trends Biochem Sci 15: 430-434.
58. Schiestl, R.H., and Gietz, R.D. (1989) High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier. Curr Genet 16: 339-346.
59. Schricker, R., Magdolen, V., Kaniak, A., Wolf, K., and Bandlow, W. (1992) The adenylate kinase family in yeast: identification of URA6 as a multicopy suppressor of deficiency in major AMP kinase. Gene 122: 111-118.
60. Schricker, R., Magdolen, V., Strobel, G., Bogengruber, E., Breitenbach, M., and Bandlow, W. (1995) Strain-dependent occurrence of functional GTP:AMP phosphotransferase (AK3) in Saccharomyces cerevisiae. J Biol Chem 270: 31103-31110.
61. Schüller, H.J., Hahn, A., Tröster, F., Schütz, A., and Schweizer, E. (1992) Coordinate genetic control of yeast fatty acid synthase genes FAS1 and FAS2 by an upstream activation site common to genes involved in membrane lipid biosynthesis. EMBO J 11: 107-114.
62. Schüller, C., Brewster, J.L., Alexander, M.R., Gustin, M.C., and Ruis, H. (1994) The HOG pathway controls osmotic regulation of transcription via the stress responsive element (STRE) of the Saccharomyces cerevisiae CTT1 gene. EMBO J 13: 4382-4389.
63. Steels, E.I., Learmonth, R.P., and Watson, K. (1994) Stress tolerance and membrane lipid unsaturation in Saccharomyces cerevisiae grown aerobically or anaerobically. Microbiology 140: 569-576.
64. Stephen, D.W., and Jamieson, D.J. (1997) Amino acid dependent regulation of the Saccharomyces cerevisiae GSH1 gene by hydrogen peroxide. Mol Microbiol 23: 203-210.
65. Storz, G., Tartaglia, L.A., Farr, S.B., and Ames, B.N. (1990) Bacterial defenses against oxidative stress. Trends Genet 6: 363-368.
66. Towbin, H., Staehelin, T., and Gordon, J. (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 76: 4350-4354.
67. Varela, J.C.S., Praekelt, U.M., Meacock, P.A., Planta, R.J., and Mager, W.H. (1995) The Saccharomyces cerevisiae HSP12 gene is activated by the high-osmolarity glycerol pathway and negatively regulated by protein kinase A. Mol Cell Biol 15: 6232-6245.
68. Winderickx, J., de Winde, J.H., Crauwels, M., Hino, A., Hohmann, S., Van Dijck, P., and Thevelein, J.M. (1996) Regulation of genes encoding subunits of the trehalose synthase complex in Saccharomyces cerevisiae: novel variations of STRE-mediated transcription control? Mol Gen Genet 252: 470-482.
69. Zamenhoff, S. (1957) Preparation and assay of deoxyribonucleic acids from animal tissue. Methods Enzymol 3: 696-704.