Two novel Drosophila TAF(II)s have homology with human TAF(II)30 and are differentially regulated during development

Molecular and Cellular Biology

Volumn 20, Issue 5, 2000, Pages 1639-1648

  Georgieva, Sofia ^a,b,c   Kirschner, Doris B ^a   Jagla, Tereza ^d   Nabirochkina, Elena ^b,c   Hanke, Susanne ^e   Schenkel, Heide ^e   De Lorenzo, Cécilia ^e   Sinha, Pradip ^f   Jagla, Krysztof ^d   Mechler, Bernard ^e   Tora, Làszlò ^a  

^a INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

^b INSERM   (France)

^c INSTITUTE OF GENE BIOLOGY   (Russian Federation)

^d UNIVERSITY OF OSLO   (Norway)

^e GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

^f DEVI AHILYA UNIVERSITY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

RNA POLYMERASE II; TATA BINDING PROTEIN;

ARTICLE; DROSOPHILA; EMBRYO; EMBRYO DEVELOPMENT; GENE ACTIVITY; GENETIC ANALYSIS; HUMAN; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; SEQUENCE HOMOLOGY; TRANSCRIPTION INITIATION;

DROSOPHILA;

EID: 0033976272     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.20.5.1639-1648.2000     Document Type: Article

References (48)

1. Becker, P. B., and C. Wu. 1992. Cell-free system for assembly of transcriptionally repressed chromatin from Drosophila embryos. Mol. Cell. Biol. 12: 2241-2249.
2. Bell, B., and L. Tora. 1999. Regulation of gene expression by multiple forms of TFIID and other novel TAFII-containing complexes. Exp. Cell Res. 246:11-19.
3. Bertolotti, A., Y. Lutz, D. J. Heard, P. Chambon, and L. Tora. 1996. hTAFII68, a novel RNA/ssDNA-binding protein with homology to the prooncoproteins TLS/FUS and EWS is associated with both TFIID and RNA polymerase II. EMBO J. 15:5022-5031.
4. Bertolotti, A., T. Melot, J. Acker, M. Vigneron, O. Delattre, and L. Tora. 1998. EWS, but not EWS-FLI-1, is associated with both TFIID and RNA polymerase II: interactions between two members of the TET family, EWS and hTAFII68, and subunits of TFIID and RNA polymerase II complexes. Mol. Cell. Biol. 18:1489-1497.
5. Brand, M., K. Yamamoto, A. Staub, and L. Tora. 1999. Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction. J. Biol. Chem. 274: 18285-18289.
6. Brou, C., S. Chaudhary, I. Davidson, Y. Lutz, J. Wu, J. M. Egly, L. Tora, and P. Chambon. 1993. Distinct TFIID complexes mediate the effect of different transcriptional activators. EMBO J. 12:489-499.
7. Candau, R., J. X. Zhou, C. D. Allis, and S. L. Berger. 1997. Histone acetyl-transferase activity and interaction with ADA2 are critical for GCN5 function in vivo. EMBO J. 16:555-565.
8. Chen, J. L., L. D. Attardi, C. P. Verrijzer, K. Yokomori, and R. Tjian. 1994. Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators. Cell 79:93-105.
9. II105 is a cell type-specific TFIID subunit related to hTAFII130. Cell 87:137-146.
10. Dynlacht, B. D., R. O. Weinzierl, A. Admon, and R. Tjian. 1993. The dTAFII80 subunit of Drosophila TFIID contains beta-transducin repeats. Nature 363:176-179.
11. Force, A., M. Lynch, F. B. Pickett, A. Amores, Y. L. Yan, and J. Postlethwait. 1999. Preservation of duplicate genes by complementary, degenerative mutations. Genetics 151:1531-1545.
12. Ganfornina, M. D., and D. Sanchez. 1999. Generation of evolutionary novelty by functional shift. Bioessays 21:432-439.
13. Grant, P. A., D. Schieltz, M. G. Pray-Grant, D. J. Steger, J. C. Reese, J. R. Yates, and J. L. Workman. 1998. A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation. Cell 94:45-53.
14. Gregory, P. D., A. Schmid, M. Zavari, L. Lui, S. L. Berger, and W. Horz. 1998. Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast. Mol. Cell 1:495-505.
15. Hansen, S. K., and R. Tjian. 1995. TAFs and TFIIA mediate differential utilization of the tandem Adh promoters. Cell 82:565-575.
16. Hartenstein, K., P. Sinha, A. Mishra, H. Schenkel, I. Torok, and B. M. Mechler. 1997. The congested-like tracheae gene of Drosophila melanogaster encodes a member of the mitochondrial carrier family required for gas-filling of the tracheal system and expansion of the wings after eclosion. Genetics 147:1755-1768.
17. Jacq, X., C. Brou, Y. Lutz, I. Davidson, P. Chambon, and L. Tora. 1994. Human TAFII30 is present in a distinct TFIID complex and is required for transcriptional activation by the estrogen receptor. Cell 79:107-117.
18. Jeanmougin, F., J. D. Thompson, M. Gouy, D. G. Higgins, and T. J. Gibson. 1998. Multiple sequence alignment with Clustal X. Trends Biochem. Sci. 23:403-405.
19. Kamakaka, R. T., C. M. Tyree, and J. T. Kadonaga. 1991. Accurate and efficient RNA polymerase II transcription with a soluble nuclear fraction derived from Drosophila embryos. Proc. Natl. Acad. Sci. USA 88:1024-1028.
20. Kazantsev, A., D. Mu, A. F. Nichols, X. Zhao, S. Linn, and A. Sancar. 1996. Functional complementation of xeroderma pigmentosum complementation group E by replication protein A in an in vitro system. Proc. Natl. Acad. Sci. USA 93:5014-5018.
21. Klebanow, E. R., D. Poor, S. Zhou, and P. A. Weil. 1996. Isolation and characterization of TAF25, an essential yeast gene that encodes an RNA polymerase II-specilic TATA-binding protein-associated factor. J. Biol. Chem. 271:13706-13715.
22. Kokubo, T., D.-W. Gong, J. C. Wootton, M. Horikoshi, R. G. Roeder, and Y. Nakatani. 1994. Molecular cloning of Drosophila TFIID subunits. Nature 367:484-487.
23. Kokubo, T., D. W. Gong, S. Yamashita, M. Horikoshi, R. G. Roeder, and Y. Nakatani. 1993. Drosophila 230-kD TFIID subunit, a functional homolog of the human cell cycle gene product, negatively regulates DNA binding of the TATA box-binding subunit of TFIID. Genes Dev. 7:1033-1046.
24. Kuo, M. H., and C. D. Allis. 1998. Roles of histone acetyltransferases and deacetylases in gene regulation. Bioessays 20:615-626.
25. Lee, T. I., and R. A. Young. 1998. Regulation of gene expression by TBP-associated proteins. Genes Dev. 12:1398-1408.
26. Martinez, E., T. K. Kundu, J. Fu, and R. G. Roeder. 1998. A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID. J. Biol. Chem. 273:23781-23785.
27. Metzger, D., E. Scheer, A. Soldatov, and L. Tora. 1999. Mammalian TAF(II)30 is required for cell cycle progression and specific cellular differentiation programmes. EMBO J. 18:4823-1834.
28. Nadeau, J. H., and D. Sankoff. 1997. Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution. Genetics 147:1259-1266.
29. Nei, M., and A. K. Roychoudhury. 1973. Probability of fixation and mean fixation time of an overdominant mutation. Genetics 74:371-380.
30. Ogryzko, V. V., T. Kotani, X. Zhang, R. L. Schlitz, T. Howard, X. J. Yang, B. H. Howard, J. Qin, and Y. Nakatani. 1998. Histone-like TAFs within the PCAF histone acetylase complex. Cell 94:35-44.
31. Ohno, S. 1993. Patterns in genome evolution. Curr. Opin. Genet. Dev. 3:911-914.
32. Ohno, S., U. Wolf, and N. B. Atkin. 1968. Evolution from fish to mammals by gene duplication. Hereditas 59:169-187.
33. Platero, J. S., E. J. Sharp, P. N. Adler, and J. C. Eissenberg. 1996. In vivo assay for protein-protein interactions using Drosophila chromosomes. Chromosoma 104:393-404.
34. Sandaltzopoulos, R., and P. B. Becker. 1995. Analysis of protein-DNA interaction by solid-phase footprinting. Methods Mol. Cell Biol. 5:176-181.
35. Sanders, S. L., E. R. Klebanow, and P. A. Weil. 1999. TAF25p, a non-histone-like subunit of TFIID and SAGA complexes, is essential for total mRNA gene transcription in vivo. J. Biol. Chem. 274:18847-18850.
36. II in nucleocytoplasmic transport of mRNA. Genetics 152:869-880.
37. Sidow, A. 1996. Gen(om)e duplications in the evolution of early vertebrates. Curr. Opin. Genet. Dev. 6:715-722.
38. Smith, E. R., J. M. Belote, R. L. Schlitz, X. J. Yang, P. A. Moore, S. L. Berger, Y. Nakatani, and C. D. Allis. 1998. Cloning of Drosophila GCN5: conserved features among metazoan GCN5 family members. Nucleic Acids Res. 26: 2948-2954.
39. Soldatov, A., E. Nabirochkina, S. Georgieva, T. Belenkaja, and P. Georgiev. 1999. TAFII40 protein is encoded by the e(y)1 gene: biological consequences of mutations. Mol. Cell. Biol. 19:3769-3778.
40. Struhl, K., and Z. Moqtaderi. 1998. The TAFs in the HAT. Cell 94:1-4.
41. Taggart, A. K., and B. F. Pugh. 1996. Dimerization of TFIID when not bound to DNA. Science 272:1331-1333.
42. Tansey, W. P., and W. Herr. 1997. TAFs: guilt hy association? Cell 88:729-732.
43. Tjian, R., and T. Maniatis. 1994. Transcriptional activation: a complex puzzle with few easy pieces. Cell 77:5-8.
44. Torok, I., D. Strand, R. Schmitt, G. Tick, T. Torok, I. Kiss, and B. M. Mechler. 1995. The overgrown hematopoietic organs-31 tumor suppressor gene of Drosophila encodes an Importin-like protein accumulating in the nucleus at the onset of mitosis. J. Cell Biol. 129:1473-1489.
45. Wieczorek, E., M. Brand, X. Jacq, and L. Tora. 1998. Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II. Nature 393:187-191.
46. Workman, J. L., and R. E. Kingston. 1998. Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 67:545-579.
47. Yokomori, K., J. L. Chen, A. Admon, S. Zhou, and R. Tjian. 1993. Molecular cloning and characterization of dTAFII30 alpha and dTAFII30 beta: two small subunits of Drosophila TFIID. Genes Dev. 7:2587-2597.
48. Zhang, W., J. R. Bone, D. G. Edmondson, B. M. Turner, and S. Y. Roth. 1998. Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. 17:3155-3167.