TAF(II)40 protein is encoded by the e(y)1 gene: Biological consequences of mutations

Molecular and Cellular Biology

Volumn 19, Issue 5, 1999, Pages 3769-3778

  Soldatov, Aleksei ^a   Nabirochkina, Elena ^a   Georgieva, Sofia ^c   Belenkaja, Tatiana ^c   Georgiev, Pavel ^a,b  

^a INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Italy)

^b INSTITUTE OF GENE BIOLOGY   (Russian Federation)

^c NONE

Author keywords

[No Author keywords available]

Indexed keywords

TATA BINDING PROTEIN; TATA BINDING PROTEIN ASSOCIATED FACTOR II 40; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG; DROSOPHILA PROTEIN; E(Y)1 PROTEIN, DROSOPHILA; MESSENGER RNA; TATA BINDING PROTEIN ASSOCIATED FACTOR; TRANSACTIVATOR PROTEIN; TRANSCRIPTION FACTOR IID;

AMINO ACID SUBSTITUTION; ARTICLE; DROSOPHILA MELANOGASTER; ENHANCER REGION; FEMALE STERILITY; GENE EXPRESSION; GENE INSERTION; GENE MUTATION; GENE STRUCTURE; GENETIC TRANSCRIPTION; NONHUMAN; OOCYTE DEVELOPMENT; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; STRUCTURE ANALYSIS; AMINO ACID SEQUENCE; ANIMAL; CYTOCHEMISTRY; FEMALE; GENE; GENE EXPRESSION REGULATION; GENETICS; HISTOLOGY; IN SITU HYBRIDIZATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; MUTATION; PHENOTYPE; REPRODUCTION;

ARACHNIDA; DROSOPHILA MELANOGASTER; HEXAPODA; HUMAN ECHOVIRUS 1; MELANOGASTER;

AMINO ACID SEQUENCE; ANIMALS; CLONING, MOLECULAR; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; FEMALE; GENE EXPRESSION REGULATION; GENES, INSECT; HISTOCYTOCHEMISTRY; IN SITU HYBRIDIZATION; MOLECULAR SEQUENCE DATA; MUTATION; PHENOTYPE; REPRODUCTION; RNA, MESSENGER; TATA-BINDING PROTEIN ASSOCIATED FACTORS; TRANS-ACTIVATORS; TRANSCRIPTION FACTOR TFIID;

EID: 0032588405     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/mcb.19.5.3769     Document Type: Article

References (65)

1. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
2. II90 is required for cell-cycle progression through G2/M but not for general transcription activation. Genes Dev. 10:2368-2380.
3. Ashburner, M. 1989. Drosophila: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
4. Belenkaya, T., K. Barseguyan, H. Hovhannisayn, I. Biryukova, E. Z. Kochieva, and P. Georgiev. 1998. P element sequences can compensate a deletion of the yellow regulatory region in Drosophila melanogaster. Mol. Gen. Genet. 259:79-87.
5. Belenkaya, T., A. Soldatov, E. Nabirochkina, I. Birjukova, S. Georgieva, and P. Georgiev. 1998. The allele of the polyhomeotic gene induced by P element insertion encodes a new chimeric protein, that negatively regulates the expression of P-induced alleles in the yellow locus of Drosophila melanogaster. Genetics 150:687-697.
6. Bickel, S., and V. Pirrotta. 1990. Self-association of the Drosophila zeste protein is responsible for the transvection effects. EMBO J. 9:2959-2967.
7. Brou, C., S. Chaudhary, I. Davidson, Y. Lutz, J. Wu, J. M. Egly, L. Tora, and P. Chambon. 1993. Distinct TFIID complexes mediate the effect of different transcriptional activators. EMBO J. 12:489-499.
8. Brou, C., J. Wu, S. Ali, E. Scheer, C. Lang, I. Davidson, P. Chambon, and L. Tora. 1993. Different TBP-associated factors are required for mediating the stimulation of transcription in vitro by the acidic transactivator GAL-VP16 and the two nonacidic activation functions of the estrogen receptor. Nucleic Acids Res. 21:5-12.
9. Burke, T. W., and J. T. Kadonaga. 1996. Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters. Genes Dev. 10:711-724.
10. II60 of Drosophila. Genes Dev. 11:3020-3031.
11. Burley, S. K., and R. G. Roeder. 1996. Biochemistry and structural biology of transcription factor IID (TFIID). Annu. Rev. Biochem. 65:769-799.
12. Bustin, M., D. A. Lehn, and D. Lendsman. 1990. Structural features of the HMG chromosomal proteins and their genes. Biochim. Biophys. Acta 1094: 231-243.
13. Cai, H., and M. Levine. 1995. Modulation of enhancer-promoter interactions by insulators in the Drosophila embryo. Nature 376:533-536.
14. Chen, J.-L., L. D. Attardi, C. P. Verrijzer, K. Yokomori, and R. Tjian. 1994. Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators. Cell 79:93-105.
15. II100 are required for functional interaction with transcription factor TFIIFb (RAP30) and incorporation into the TFIID complex. EMBO J. 15:3702-3712.
16. Fauvarque, M.-O., and J.-M. Dura. 1993. polyhomeotic regulatory sequences induce developmental regulator-dependent variegation and targeted P-element insertions in Drosophila. Genes Dev. 7:1508-1520.
17. D1 of Drosophila melanogaster by replicative transposition of a sc enhancer to the yellow gene and by mutations in the enhancer of yellow and zeste loci. Mol. Gen. Genet. 253:370-376.
18. Georgiev, P., and T. Kahn Unpublished data.
19. Georgiev, P., and M. Kozycina. 1996. Interaction between mutations in the suppressor of Hairy wing and modifier of mdg4 genes of Drosophila melanogaster affecting the phenotype of gypsy-induced mutations. Genetics 142:425-436.
20. Georgiev, P. G., and T. I. Gerasimova. 1989. Novel genes influencing the expression of the yellow locus and mdg4 (gypsy) in Drosophila melanogaster. Mol. Gen. Genet. 220:121-126.
21. Georgiev, P. G., S. L. Kiselev, O. B. Simonova, and T. I. Gerasimova. 1990. A novel transposition system in Drosophila melanogaster depending on the Stalker mobile genetic element. EMBO J. 9:2037-2044.
22. Georgiev, P. G. 1994. Identification of mutations in three genes that interact with zeste in the control of white gene expression in Drosophila melanogaster. Genetics 138:733-739.
23. Geyer, P. K., and V. G. Corces. 1987. Separate regulatory elements are responsible for the complex pattern of tissue-specific and developmental transcription of the yellow locus in Drosophila melanogaster. Genes Dev. 1:996-1004.
24. Geyer, P. K., and V. G. Corces. 1992. DNA position-specific repression of transcription by a Drosophila zinc finger protein. Genes Dev. 6:1865-1873.
25. Geyer, P. K., M. M. Green, and V. G. Corces. 1988. Mutant gene phenotypes mediated by a Drosophila melanogaster tetrotransposon require sequences homologous to mammalian enhancers. Proc. Natl. Acad. Sci. USA 85:8593-8597.
26. Geyer, P. K., M. M. Green, and V. G. Corces. 1998. Reversion of a gypsy-induced mutation at the yellow (y) locus of Drosophila melanogaster is associated with the insertion of a newly defined transposable element. Proc. Natl. Acad. Sci. USA 85:3938-3942.
27. Geyer, P. K., K. L. Richardson, V. G. Corces, and M. M. Green. 1988. Genetic instability in Drosophila melanogaster. P-element mutagenesis by gene conversion. Proc. Natl. Acad. Sci. USA 85:6455-6459.
28. Geyer, P. K., C. Spana, and V. G. Corces. 1986. On the molecular mechanism of gypsy-induced mutations at the yellow locus of Drosophila melanogaster. EMBO J. 5:2657-2662.
29. II40 interacts with both VP16 activation domain and the basal transcription factor TFIIB. Cell 75:519-530.
30. Harrison, D. A., D. A. Gdula, R. S. Coyne, and V. G. Corces. 1993. A leucine zipper domain of the suppressor of Hairy-wing protein mediates its repressive effect on enhancer function. Genes Dev. 7:1966-1978.
31. Hoffman, A., C.-M. Chiang, T. Oelgeschlager, X. Xie, S. K. Burley, Y. Nakatani, and R. G. Roeder. 1996. A histone octamer-like structure within TFIID. Nature 380:356-359.
32. Holdridge, C., and D. Dorsett. 1991. Repression of hsp70 heat shock gene transcription by the suppressor of Hairy-wing protein of Drosophila melanogaster. Mol. Cell. Biol. 11:1894-1990.
33. Jack, J., D. Dorsett, Y. DeLotto, and S. Liu. 1991. Expression of the cut locus in the Drosophila wing margin is required for cell type specification and is regulated by a distant enhancer. Development 113:735-747.
34. II30 is present in a distinct TFIID complex and is required for transcriptional activation by the estrogen receptor. Cell 79:107-117.
35. Kares, R. E., and G. M. Rubin. 1984. Analysis of P transposable element functions in Drosophila. Cell 38:135-146.
36. Klemm, R. D., J. A. Goodrich, S. Zhou, and R. Tjian. 1995. Molecular cloning and expression of the 32-kDa subunit of human TFIID reveals interactions with Vp16 and TFIIB that mediate transcriptional activation. Proc. Natl. Acad. Sci. USA 92:5788-5792.
37. Levis, R., T. Hazelrigg, and G. M. Rubin. 1985. Separable cis-acting control elements for expression of the white gene of Drosophila. EMBO J. 4:3489-3499.
38. Lindsley, D. L., and G. G. Zimm. 1992. The genome of Drosophila melanogaster. Academic Press, New York, N.Y.
39. II31 protein is a transcriptional coactivator of the p53 protein. Proc. Natl. Acad. Sci. USA 92:5154-5158.
40. Maes, M., and E. Messens. 1992. Phenol as grinding material in RNA preparations. Nucleic Acids Res. 20:4374.
41. Moqtaderi, Z., Y. Bai, D. Poon, P. A. Weil, and K. Struhl. 1996. TBP-associated factors are not generally required for transcriptional activation. Nature 382:188-191.
42. Parkhurst, S. M., D. A. Harrison, M. P. Remington, C. Spane, R. L. Kelley, R. S. Coyne, and V. G. Corces. 1988. The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA-binding protein. Genes Dev. 2:1205-1215.
43. Pirrotta, V. 1988. Vectors for P-mediated transformation in Drosophila, p. 437-445. In R. L. Rodriguez and D. T. Denhardt (ed.), Vector: a survey of molecular cloning vectors and their uses. Butterworths, Boston, Mass.
44. Pirrotta, V., E. Manet, E. Harbon, S. E. Bickel, and M. Benson. 1987. Structure and sequence of the Drosophila zeste gene. EMBO J. 6:791-799.
45. Pirrotta, V., H. Steller, and M. P. Bozzetti. 1985. Multiple upstream regulatory elements control the expression of the Drosophila white gene. EMBO J. 4:3501-3508.
46. Platero, J. S., E. J. Sharp, P. N. Adler, and J. C. Eissenberg. 1996. In vivo assay for protein-protein interactions using Drosophila chromosomes. Chromosoma 104:393-404.
47. IIs in a multisubunit complex required for activated transcription. Nature 371:523-527.
48. Roeder, R. 1996. The role of general initiation factors in transcription by RNA polymerase II. Trends Biochem. Sci. 21:327-335.
49. Roseman, R. R., E. A. Johnson, C. K. Rodesch, M. Bjerke, R. N. Nagoshi, and P. K. Geyer. 1995. A P element containing suppressor of Hairy-wing binding regions has novel properties for mutagenesis in Drosophila melanogaster. Genetics 141:1061-1074.
50. Roseman, R. R., V. Pirrotta, and P. K. Geyer. 1993. The su(Hw) protein insulates expression of the Drosophila melanogaster white gene from chromosomal position-effects. EMBO J. 12:435-442.
51. Rubin, G. M., and A. C. Spradling. 1982. Genetic transformation of Drosophila with transposable element vectors. Science 218:348-353.
52. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
53. IIs mediate activation of transcription in the Drosophila embryo. Cell 87:1271-1284.
54. Scott, K. S., and P. K. Geyer. 1995. Effects of the su(Hw) insulator protein on the expression of the divergently transcribed Drosophila yolk protein genes. EMBO J. 14:6258-6279.
55. Soldatov, A. V., and E. N. Nabirochkina. 1996. A new method for cloning Drosophila melanogaster genes marked with highly copied mobile genetic element. Russ. J. Genet. 32:1497-1500.
56. Spradling, A. C., and G. M. Rubin. 1982. Transposition of cloned P elements into germlike chromosomes. Science 218:341-347.
57. Tansey, W. P., and W. Herr. 1997. TAFs: guilt by association. Cell 88:729-732.
58. II60. Science 267:100-104.
59. Tjian, R., and T. Maniatis. 1994. Transcriptional activation: a complex puzzle with few easy pieces. Cell 77:5-8.
60. Verrijzer, C. P., and R. Tjian. 1996. TAFs mediate transcriptional activation and promoter selectivity. Trends Biochem. Sci. 21:338-342.
61. Qian, S., B. Varjavand, and V. Pirrotta. 1992. Molecular analysis of the zeste-white interaction reveals a promoter-proximal element essential for distant enhancer-promoter communication. Genetics 131:79-90.
62. IIs. Nature 382:185-188.
63. II145 required for transcription of G1/S cyclin genes and regulated by the cellular growth state. Cell 90:607-614.
64. II250. Science 263:811-814.
65. Xie, X., T. Kokubo, S. L. Cohen, U. A. Mirza, A. Hoffmann, B. T. Chait, R. G. Roeder, Y. Nakatani, and S. K. Burley. 1996. Structural similarity between TAFs and the heterotetrameric core of the histone octamer. Nature 380: 316-322.