Biochemical and genetic conservation of fission yeast Dsk1 and human SR protein-specific kinase 1

Molecular and Cellular Biology

Volumn 20, Issue 3, 2000, Pages 816-824

  Tang, Zhaohua ^a   Kuo, Tiffany ^a   Shen, Jenny ^a   Lin, Ren Jang ^a  

^a CITY OF HOPE NATIONAL MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; MESSENGER RNA PRECURSOR; PROTEIN KINASE; SERINE;

ARTICLE; CONTROLLED STUDY; ENZYME SPECIFICITY; EVOLUTION; GENETIC CONSERVATION; HUMAN; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; RNA SPLICING; SCHIZOSACCHAROMYCES POMBE; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ARGININE; CLONING, MOLECULAR; ESCHERICHIA COLI; GLUTATHIONE TRANSFERASE; HUMANS; PHOSPHORYLATION; PROTEIN-SERINE-THREONINE KINASES; RECOMBINANT FUSION PROTEINS; REPETITIVE SEQUENCES, AMINO ACID; RNA SPLICING; SCHIZOSACCHAROMYCES; SERINE;

EID: 0033963334     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.20.3.816-824.2000     Document Type: Article

References (57)

1. Alfa, C., P. Fantes, J. Hyams, M. McLeod, and E. Warbrick. 1993. Experiments with fission yeast: a laboratory course manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
2. Bridge, E., D. X. Xia, M. Carmo-Fonseca, B. Cardinali, A. I. Lamond, and U. Pettersson. 1995. Dynamic organization of splicing factors in adenovirus-infected cells. J. Virol. 69:281-290.
3. Cao, W., S. F. Jamison, and M. A. Garcia-Blanco. 1997. Both phosphorylation and dephosphorylation of ASF/SF2 are required for pre-mRNA splicing in vitro. RNA 3:1456-1467.
4. Colwill, K., L. L. Feng, J. M. Yeakley, G. D. Gish, J. F. Caceres, T. Pawson, and X. D. Fu. 1996. SRPK1 and Clk/Sty protein kinases show distinct substrate specificities for serine/arginine-rich splicing factors. J. Biol. Chem. 271:24569-24575.
5. Colwill, K., T. Pawson, B. Andrews, J. Prasad, J. L. Manley, J. C. Bell, and P. I. Duncan. 1996. The Clk/Sty protein kinase phosphorylates SR splicing factors and regulates their intranuclear distribution. EMBO J. 15:265-275.
6. Corden, J. L., and M. Patturajan. 1997. A CTD function linking transcription to splicing. Trends Biochem. Sci. 22:413-416.
7. Du, C., M. E. McGuffin, B. Dauwalder, L. Rabinow, and W. Mattox. 1998. Protein phosphorylation plays an essential role in the regulation of alternative splicing and sex determination in Drosophila. Mol. Cell 2:741-750.
8. Fu, X. D. 1995. The superfamily of arginine/serine-rich splicing factors. RNA 1:663-680.
9. Gottesfeld, J. M., and D. J. Forbes. 1997. Mitotic repression of the transcriptional machinery. Trends Biochem. Sci. 22:197-202.
10. Gross, T., M. Lutzelberger, H. Weigmann, A. Klingenhoff, S. Shenoy, and N. F. Kaufer. 1997. Functional analysis of the fission yeast Prp4 protein kinase involved in pre-mRNA splicing and isolation of a putative mammalian homologue. Nucleic Acids Res. 25:1028-1035.
11. Gross, T., K. Richert, C. Mierke, M. Lutzelberger, and N. F. Kaufer. 1998. Identification and characterization of srp1, a gene of fission yeast encoding a RNA binding domain and a RS domain typical of SR splicing factors. Nucleic Acids Res. 26:505-511.
12. Gui, J. F., W. S. Lane, and X. D. Fu. 1994. A serine kinase regulates intracellular localization of splicing factors in the cell cycle. Nature 369:678-682.
13. Kaufer, N. F., V. Simanis, and P. Nurse. 1985. Fission yeast Schizosaccharomyces pombe correctly excises a mammalian RNA transcript intervening sequence. Nature 318:78-80.
14. Kirschner, M. 1992. The cell cycle then and now. Trends Biochem. Sci. 17:281-285.
15. Kohtz, J. D., S. F. Jamison, C. L. Will, P. Zuo, R. Luhrmann, M. A. Garcia-Blanco, and J. L. Manley. 1994. Protein-protein interactions and 5′-splice-site recognition in mammalian mRNA precursors. Nature 368:119-124.
16. Koizumi, J., Y. Okamoto, H. Onogi, A. Mayeda, A. R. Krainer, and M. Hagiwara. 1999. The subcellular localization of SF2/ASF is regulated by direct interaction with SR protein kinases (SRPKs). J. Biol. Chem. 274: 11125-11131.
17. Komeili, A., and E. K. O'Shea. 1999. Roles of phosphorylation sites in regulating activity of the transcription factor Pho4. Science 284:977-980.
18. Kuroyanagi, N., H. Onogi, T. Wakabayashi, and M. Hagiwara. 1998. Novel SR-protein-specific kinase, SRPK2, disassembles nuclear speckles. Biochem. Biophys. Res. Commun. 242:357-364.
19. Manley, J. L., and R. Tacke. 1996. SR proteins and splicing control. Genes Dev. 10:1569-1579.
20. Maundrell, K. 1990. nmt1 of fission yeast: a highly transcribed gene completely repressed by thiamine. J. Biol. Chem. 265:10857-10864.
21. Maundrell, K. 1993. Thiamine-repressible expression vectors pREP and pRIP for fission yeast. Gene 123:127-130.
22. McDonald, W. H., R. Ohi, N. Smelkova, D. Frendewey, and K. L. Gould. 1999. Myb-related fission yeast cdc5p is a component of a 40S snRNP-containing complex and is essential for pre-mRNA splicing. Mol. Cell. Biol. 19:5352-5362.
23. Mermoud, J. E., P. T. Cohen, and A. I. Lamond. 1994. Regulation of mammalian spliceosome assembly by a protein phosphorylation mechanism. EMBO J. 13:5679-5688.
24. Misteli, T., J. F. Caceres, J. Q. Clement, A. R. Krainer, M. F. Wilkinson, and D. L. Spector. 1998. Serine phosphorylation of SR proteins is required for their recruitment to sites of transcription in vivo. J. Cell Biol. 143:297-307.
25. Misteli, T., and D. L. Spector. 1998. The cellular organization of gene expression. Curr. Opin. Cell Biol. 10:323-331.
26. Misteli, T., and D. L. Spector. 1996. Serine/threonine phosphatase 1 modulates the subnuclear distribution of pre-mRNA splicing factors. Mol. Biol. Cell 7:1559-1572.
27. Moreno, S., A. Klar, and P. Nurse. 1991. Molecular genetic analysis of fission yeast Schizosaccharomyces pombe. Methods Enzymol. 194:795-823.
28. Murone, M., and V. Simanis. 1996. The fission yeast dma1 gene is a component of the spindle assembly checkpoint, required to prevent septum formation and premature exit from mitosis if spindle function is compromised. EMBO J. 15:6605-6616.
29. Murray, M. V., R. Kobayashi, and A. R. Krainer. 1999. The type 2C Ser/Thr phosphatase PP2Cgamma is a pre-mRNA splicing factor. Genes Dev. 13: 87-97.
30. Nikolakaki, E., G. Simos, S. D. Georgatos, and T. Giannakouros. 1996. A nuclear envelope-associated kinase phosphorylates arginine-serine motifs and modulates interactions between the lamin B receptor and other nuclear proteins. J. Biol. Chem. 271:8365-8372.
31. Nurse, P. 1990. Universal control mechanism regulating onset of M-phase. Nature 344:503-508.
32. Ohba, T., M. Nakamura, H. Nishitani, and T. Nishimoto. 1999. Self-organization of microtubule asters induced in xenopus egg extracts by GTP-bound Ran. Science 284:1356-1358.
33. Potashkin, J., D. Kim, M. Fons, T. Humphrey, and D. Frendewey. 1998. Cell-division-cycle defects associated with fission yeast pre-mRNA splicing mutants. Curr. Genet. 34:153-163.
34. Potashkin, J., R. Li, and D. Frendewey. 1989. Pre-mRNA splicing mutants of Schizosaccharomyces pombe. EMBO J. 8:551-559.
35. Potashkin, J., K. Naik, and K. Wentz-Hunter. 1993. U2AF homolog required for splicing in vivo. Science 262:573-575.
36. Prabhala, G., G. H. Rosenberg, and N. F. Kaufer. 1992. Architectural features of pre-mRNA introns in the fission yeast Schizosaccharomyces pombe. Yeast 8:171-182.
37. Romfo, C. M., S. Lakhe-Reddy, and J. A. Wise. 1999. Molecular genetic analysis of U2AF59 in Schizosaccharomyces pombe: differential sensitivity of introns to mutational inactivation. RNA 5:49-65.
38. Rosenberg, G. H., S. K. Alahari, and N. F. Kaufer. 1991. prp4 from Schizosaccharomyces pombe, a mutant deficient in pre-mRNA splicing isolated using genes containing artificial introns. Mol. Gen. Genet. 226:305-309.
39. Rossi, F., E. Labourier, T. Ferne, G. Divita, J. Derancourt, J. F. Riou, E. Antoine, G. Cathala, C. Brunel, and J. Tazi. 1996. Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I. Nature 381:80-82.
40. Roth, M. B., C. Murphy, and J. G. Gall. 1990. A monoclonal antibody that recognizes a phosphorylated epitope stains lampbrush chromosome loops and small granules in the amphibian germinal vesicle. J. Cell Biol. 111:2217-2223.
41. Roth, M. B., A. M. Zahler, and J. A. Stolk. 1991. A conserved family of nuclear phosphoproteins localized to sites of polymerase II transcription. J. Cell Biol. 115:587-596.
42. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
43. Sanford, J. R., and J. P. Bruzik. 1999. Developmental regulation of SR protein phosphorylation and activity. Genes Dev. 13:1513-1518.
44. Siebel, C. W., L. Feng, C. Guthrie, and X. Fu. 1999. Conservation in budding yeast of a kinase specific for SR splicing factors. Proc. Natl. Acad. Sci. USA 96:5440-5445.
45. Takahashi, K., H. Yamada, and M. Yanagida. 1994. Fission yeast minichromosome loss mutants mis cause lethal aneuploidy and replication abnormality. Mol. Biol. Cell 5:1145-1158.
46. Takeuchi, M., and M. Yanagida. 1993. A mitotic role for a novel fission yeast protein kinase dsk1 with cell cycle stage dependent phosphorylation and localization. Mol. Biol. Cell 4:247-260.
47. Tang, Z., M. Yanagida, and R.-J. Lin. 1998. Fission yeast mitotic regulator is an SR protein-specific kinase. J. Biol. Chem. 273:5963-5969.
48. Urushiyama, S., T. Tani, and Y. Ohshima. 1996. Isolation of novel pre-mRNA splicing mutants of Schizosaccharomyces pombe. Mol. Gen. Genet. 253:118-127.
49. + gene required for pre-mRNA splicing in Schizosaccharomyces pombe encodes a protein that contains TPR motifs and is similar to Prp6p of budding yeast. Genetics 147:101-115.
50. Wang, H. Y., W. Lin, J. A. Dyck, J. M. Yeakley, Z. Songyang, L. C. Cantley, and X. D. Fu. 1998. SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells. J. Cell Biol. 140:737-750.
51. Wentz-Hunter, K., and J. Potashkin. 1996. The small subunit of the splicing factor U2AF is conserved in fission yeast. Nucleic Acids Res. 24:1849-1854.
52. Wilde, A., and Y. Zheng. 1999. Stimulation of microtubule aster formation and spindle assembly by the small GTPase Ran. Science 284:1359-1362.
53. Woppmann, A., C. L. Will, U. Kornstadt, P. Zuo, J. L. Manley, and R. Luhrmann. 1993. Identification of an snRNP-associated kinase activity that phosphorylates arginine/serine rich domains typical of splicing factors. Nucleic Acids Res. 21:2815-2822.
54. Xiao, S. H., and J. L. Manley. 1997. Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing. Genes Dev. 11:334-344.
55. Xiao, S. H., and J. L. Manley. 1998. Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2. EMBO J. 17:6359-6367.
56. Yeakley, J. M., H. Tronchere, J. Olesen, J. A. Dyck, H. Y. Wang, and X. D. Fu. 1999. Phosphorylation regulates in vivo interaction and molecular targeting of serine/arginine-rich pre-mRNA splicing factors. J. Cell Biol. 145: 447-455.
57. Yun, B., R. Farkas, K. Lee, and L. Rabinow. 1994. The Doa locus encodes a member of a new protein kinase family and is essential for eye and embryonic development in Drosophila melanogaster. Genes Dev. 8:1160-1173.