메뉴 건너뛰기




Volumn 85, Issue 1, 2000, Pages 40-46

Alu and translisin recognition site sequences flanking translocation sites in a novel type of chimeric bcr-abl transcript suggest a possible general mechanism for bcr-abl breakpoints

Author keywords

Alu; BCR ABL; CML; Translisin

Indexed keywords

AMINO ACID; CELL PROTEIN;

EID: 0033962962     PISSN: 03906078     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (28)

References (36)
  • 1
    • 0020972979 scopus 로고
    • Localization of the c-abl oncogene adjacent to a translocation break point in chronic myelocytic leukaemia
    • Heisterkamp N, Stephenson JR, Groffen J, et al. Localization of the c-abl oncogene adjacent to a translocation break point in chronic myelocytic leukaemia. Nature 1983; 306:239-42.
    • (1983) Nature , vol.306 , pp. 239-242
    • Heisterkamp, N.1    Stephenson, J.R.2    Groffen, J.3
  • 2
    • 0023649238 scopus 로고
    • Unique fusion of bcr and c-abl genes in Philadelphia chromosome positive acute lymphoblastic leukemia
    • Hermans A, Heisterkamp N, von Linden M, et al. Unique fusion of bcr and c-abl genes in Philadelphia chromosome positive acute lymphoblastic leukemia. Cell 1987; 51:33-40.
    • (1987) Cell , vol.51 , pp. 33-40
    • Hermans, A.1    Heisterkamp, N.2    Von Linden, M.3
  • 3
    • 0022641842 scopus 로고
    • The chronic myelocytic cell line K562 contains a breakpoint in bcr and produces a chimeric bcr/c-abl transcript
    • Grosveld G, Verwoerd T, van Agthoven T, et al. The chronic myelocytic cell line K562 contains a breakpoint in bcr and produces a chimeric bcr/c-abl transcript. Mol Cell Biol 1986; 6: 607-16.
    • (1986) Mol Cell Biol , vol.6 , pp. 607-616
    • Grosveld, G.1    Verwoerd, T.2    Van Agthoven, T.3
  • 4
    • 0342285923 scopus 로고
    • Molecular genetic analysis of bcr breakpoint in Philadelphia chromosome rearrangements and correlation with prognosis and age of chronic myelogenous leukaemia patients
    • Bartsocas CS, Loukopoulos D, eds. Washington: Hemisphere Publishing Corp.
    • Martinelli G, Gasparini P, Ambrosetti A, Battista R, Perona G, Pignatti PF. Molecular genetic analysis of bcr breakpoint in Philadelphia chromosome rearrangements and correlation with prognosis and age of chronic myelogenous leukaemia patients. In: Bartsocas CS, Loukopoulos D, eds. Genetics of hematological disorders. Washington: Hemisphere Publishing Corp.; 1990. p. 185-93.
    • (1990) Genetics of Hematological Disorders , pp. 185-193
    • Martinelli, G.1    Gasparini, P.2    Ambrosetti, A.3    Battista, R.4    Perona, G.5    Pignatti, P.F.6
  • 5
    • 0029816460 scopus 로고    scopus 로고
    • The diversity of BCR-ABL fusion proteins and their relationship to leukemia phenotype
    • Melo JV. The diversity of BCR-ABL fusion proteins and their relationship to leukemia phenotype. Blood 1996; 88:2375-84.
    • (1996) Blood , vol.88 , pp. 2375-2384
    • Melo, J.V.1
  • 6
    • 0023781670 scopus 로고
    • Variability of the molecular defects corresponding to the presence of a Philadelphia chromosome in human hematologic malignancies
    • Saglio G, Guerrasio A, Tassinari A, et al. Variability of the molecular defects corresponding to the presence of a Philadelphia chromosome in human hematologic malignancies. Blood 1988; 72:1203-8.
    • (1988) Blood , vol.72 , pp. 1203-1208
    • Saglio, G.1    Guerrasio, A.2    Tassinari, A.3
  • 7
    • 0025221936 scopus 로고
    • New type of Bcr/Abl junction in Philadelphia chromosome-positive chronic myelogenous leukemia
    • Saglio G, Guerrasio A, Rosso C, et al. New type of Bcr/Abl junction in Philadelphia chromosome-positive chronic myelogenous leukemia. Blood 1990; 76: 1819-24.
    • (1990) Blood , vol.76 , pp. 1819-1824
    • Saglio, G.1    Guerrasio, A.2    Rosso, C.3
  • 8
    • 10144254429 scopus 로고    scopus 로고
    • Neutrophilic-chronic myeloid leukemia: A distinct disease with a specific molecular marker
    • Pane F, Frigeri F, Sindona M, et al. Neutrophilic-chronic myeloid leukemia: a distinct disease with a specific molecular marker. Blood 1996; 88:2410-4.
    • (1996) Blood , vol.88 , pp. 2410-2414
    • Pane, F.1    Frigeri, F.2    Sindona, M.3
  • 9
    • 0032826319 scopus 로고    scopus 로고
    • Translisin recognition site sequences flank translocation breakpoints in a Philadelphia chromosome positive chronic myeloid leukemia patient expressing a novel type of chimeric bcr-abl transcript (e8-int-a2)
    • Martinelli G, Terragna C, Amabile M, et al. Translisin recognition site sequences flank translocation breakpoints in a Philadelphia chromosome positive chronic myeloid leukemia patient expressing a novel type of chimeric bcr-abl transcript (e8-int-a2). Leukemia 1999; 13:1635-7.
    • (1999) Leukemia , vol.13 , pp. 1635-1637
    • Martinelli, G.1    Terragna, C.2    Amabile, M.3
  • 10
    • 23444462074 scopus 로고
    • Interferon alpha-2a as compared with conventional chemotherapy for the treatment of chronic myeloid leukemia
    • The Italian Cooperative Study Group on Chronic Myeloid Leukemia. Interferon alpha-2a as compared with conventional chemotherapy for the treatment of chronic myeloid leukemia. N Engl J Med 1994; 330: 820-5.
    • (1994) N Engl J Med , vol.330 , pp. 820-825
  • 11
    • 0029944386 scopus 로고    scopus 로고
    • A new method of "in cell reverse transcriptase-polymerase chain reaction" for the detection of BCR-ABL transcript in chronic myeloid leukemia patients
    • Testoni N, Martinelli G, Farabegoli P, et al. A new method of "in cell reverse transcriptase-polymerase chain reaction" for the detection of BCR-ABL transcript in chronic myeloid leukemia patients. Blood 1996; 87:3822-7.
    • (1996) Blood , vol.87 , pp. 3822-3827
    • Testoni, N.1    Martinelli, G.2    Farabegoli, P.3
  • 12
    • 13344295068 scopus 로고    scopus 로고
    • Consistent amounts of acute leukemia-associated p190BCR/ABL transcripts are expressed by chronic myelogenous leukemia patients at diagnosis
    • Saglio G, Pane F, Gottardi E, et al. Consistent amounts of acute leukemia-associated p190BCR/ABL transcripts are expressed by chronic myelogenous leukemia patients at diagnosis. Blood 1996; 87:1075-80.
    • (1996) Blood , vol.87 , pp. 1075-1080
    • Saglio, G.1    Pane, F.2    Gottardi, E.3
  • 13
    • 0031903304 scopus 로고    scopus 로고
    • Detection of bcr-abl transcript in chronic myelogenous leukemia patients by reverse-transcription-polymerase chain reaction and capillary electrophoresis
    • Martinelli G, Testoni N, Montefusco V, et al. Detection of bcr-abl transcript in chronic myelogenous leukemia patients by reverse-transcription-polymerase chain reaction and capillary electrophoresis. Haematologica 1998; 83:593-601.
    • (1998) Haematologica , vol.83 , pp. 593-601
    • Martinelli, G.1    Testoni, N.2    Montefusco, V.3
  • 14
    • 0031003429 scopus 로고    scopus 로고
    • Large-scale protein modelling and integration with the SWISS-PROT and SWISS-2DPAGE databases: The example of Escherichia coli
    • Peitsch MC, Wilkins MR, Tonella L, Sanchez JC, Appel RD, Hochstrasser DF. Large-scale protein modelling and integration with the SWISS-PROT and SWISS-2DPAGE databases: the example of Escherichia coli. Electrophoresis 1997; 18:498-501.
    • (1997) Electrophoresis , vol.18 , pp. 498-501
    • Peitsch, M.C.1    Wilkins, M.R.2    Tonella, L.3    Sanchez, J.C.4    Appel, R.D.5    Hochstrasser, D.F.6
  • 15
    • 9544227358 scopus 로고    scopus 로고
    • A novel BCR-ABL fusion gene (e6a2) in a patient with Philadelphia chromosome-negative chronic myelogenous leukemia
    • Hochhaus A, Reiter A, Skladny H, et al. A novel BCR-ABL fusion gene (e6a2) in a patient with Philadelphia chromosome-negative chronic myelogenous leukemia. Blood 1996; 88:2236-40.
    • (1996) Blood , vol.88 , pp. 2236-2240
    • Hochhaus, A.1    Reiter, A.2    Skladny, H.3
  • 17
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith TF, Waterman MS. Identification of common molecular subsequences. J Mol Biol 1981; 147:195-7.
    • (1981) J Mol Biol , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 18
    • 0028302337 scopus 로고
    • Reference points for comparisons of two-dimensional maps of proteins from different human cell types defined in a pH scale where isoelectric points correlate with polypeptide compositions
    • Bjellqvist B, Basse B, Olsen E, Celis JE. Reference points for comparisons of two-dimensional maps of proteins from different human cell types defined in a pH scale where isoelectric points correlate with polypeptide compositions. Electrophoresis 1994; 15: 529-39.
    • (1994) Electrophoresis , vol.15 , pp. 529-539
    • Bjellqvist, B.1    Basse, B.2    Olsen, E.3    Celis, J.E.4
  • 19
    • 0030094146 scopus 로고    scopus 로고
    • CENSOR-a program for identification and elimination of repetitive elements from DNA sequences
    • Jurka J, Klonowski P, Dagman V, Pelton P. CENSOR-a program for identification and elimination of repetitive elements from DNA sequences. Comput Chem 1996; 20:119-21.
    • (1996) Comput Chem , vol.20 , pp. 119-121
    • Jurka, J.1    Klonowski, P.2    Dagman, V.3    Pelton, P.4
  • 20
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994; 22:4673-80.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 21
    • 0342539585 scopus 로고    scopus 로고
    • http://www.isrec.isb-sib.ch/software/BOX_faq.html
  • 22
    • 0029005995 scopus 로고
    • Sequence and analysis of the human ABL gene, the BCR gene, and regions involved in the Philadelphia chromosomal translocation
    • Chissoe SL, Bodenteich A, Wang YF, et al. Sequence and analysis of the human ABL gene, the BCR gene, and regions involved in the Philadelphia chromosomal translocation. Genomics 1995; 27:67-82.
    • (1995) Genomics , vol.27 , pp. 67-82
    • Chissoe, S.L.1    Bodenteich, A.2    Wang, Y.F.3
  • 23
    • 0023004932 scopus 로고
    • Pre-mRNA splicing
    • Green MR. Pre-mRNA splicing. Annu Rev Genet 1986; 20:671-708.
    • (1986) Annu Rev Genet , vol.20 , pp. 671-708
    • Green, M.R.1
  • 24
    • 0031898431 scopus 로고    scopus 로고
    • The BCR gene recombines preferentially with Alu elements in complex BCR-ABL translocations of chronic myeloid leukaemia
    • Jeffs AR, Benjes SM, Smith TL, Sowerby SJ, Morris CM. The BCR gene recombines preferentially with Alu elements in complex BCR-ABL translocations of chronic myeloid leukaemia. Hum Mol Gen 1998; 7:767-76.
    • (1998) Hum Mol Gen , vol.7 , pp. 767-776
    • Jeffs, A.R.1    Benjes, S.M.2    Smith, T.L.3    Sowerby, S.J.4    Morris, C.M.5
  • 25
    • 0025674706 scopus 로고
    • Sequences of human immunoglobulin switch regions: Implications for recombination and transcription
    • Mills FC, Brooker JS, Camerini-Otero RD. Sequences of human immunoglobulin switch regions: implications for recombination and transcription. Nucleic Acids Res 1990; 18:7305-16.
    • (1990) Nucleic Acids Res , vol.18 , pp. 7305-7316
    • Mills, F.C.1    Brooker, J.S.2    Camerini-Otero, R.D.3
  • 26
    • 0342298816 scopus 로고
    • A fundamental division in the Alu family of repeated sequences
    • Jurka J, Smith T. A fundamental division in the Alu family of repeated sequences Proc Natl Acad Sci USA 1988; 85:4775-8.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 4775-4778
    • Jurka, J.1    Smith, T.2
  • 27
    • 0031023837 scopus 로고    scopus 로고
    • Isolation and characterization of a cDNA encoding a Translin-like protein, TRAX
    • Aoki K, Ishida R, Kasai M. Isolation and characterization of a cDNA encoding a Translin-like protein, TRAX. FEBS Lett 1997; 401:109-12.
    • (1997) FEBS Lett , vol.401 , pp. 109-112
    • Aoki, K.1    Ishida, R.2    Kasai, M.3
  • 28
    • 0029040211 scopus 로고
    • A novel gene, Translin, encodes a recombination hotspot binding protein associated with chromosomal translocations
    • Aoki K, Suzuki K, Sugano T, et al A novel gene, Translin, encodes a recombination hotspot binding protein associated with chromosomal translocations. Nat Genet 1995; 10:167-74.
    • (1995) Nat Genet , vol.10 , pp. 167-174
    • Aoki, K.1    Suzuki, K.2    Sugano, T.3
  • 29
    • 0027105007 scopus 로고
    • A knowledge base for predicting protein localization sites in eukaryotic cells
    • Nakai K, Kanehisa M. A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics 1992; 14:897-911.
    • (1992) Genomics , vol.14 , pp. 897-911
    • Nakai, K.1    Kanehisa, M.2
  • 30
    • 0029162610 scopus 로고
    • Characterization of acute promyelocytic leukemia cases with PML/RAR alpha break/fusion sites in PML exon 6: Identification of a subgroup with decreased in vitro responsiveness to all-trans retinoic acid
    • Gallagher RE, Li VP, Rao S, et al. Characterization of acute promyelocytic leukemia cases with PML/RAR alpha break/fusion sites in PML exon 6: identification of a subgroup with decreased in vitro responsiveness to all-trans retinoic acid. Blood 1995; 86:1540-7.
    • (1995) Blood , vol.86 , pp. 1540-1547
    • Gallagher, R.E.1    Li, V.P.2    Rao, S.3
  • 31
    • 0026513504 scopus 로고
    • Genomic variability and alternative splicing generate multiple PML/RAR alpha transcripts that encode aberrant PML proteins and PML/RAR alpha isoforms in acute promyelocytic leukaemia
    • Pandolfi PP, Alcalay M, Fagioli M, et al. Genomic variability and alternative splicing generate multiple PML/RAR alpha transcripts that encode aberrant PML proteins and PML/RAR alpha isoforms in acute promyelocytic leukaemia. EMBO J 1992; 11:1397-407.
    • (1992) EMBO J , vol.11 , pp. 1397-1407
    • Pandolfi, P.P.1    Alcalay, M.2    Fagioli, M.3
  • 32
    • 0024461175 scopus 로고
    • Structural alterations of the BCR and ABL genes in Ph1 positive acute leukemias with rearrangements in the BCR gene first intron: Further evidence implicating Alu sequences in the chromosome translocation
    • Chen SJ, Chen Z, Font MP, d'Auriol L, Larsen CJ, Berger R. Structural alterations of the BCR and ABL genes in Ph1 positive acute leukemias with rearrangements in the BCR gene first intron: further evidence implicating Alu sequences in the chromosome translocation. Nucleic Acids Res 1989; 17:7631-42.
    • (1989) Nucleic Acids Res , vol.17 , pp. 7631-7642
    • Chen, S.J.1    Chen, Z.2    Font, M.P.3    D'Auriol, L.4    Larsen, C.J.5    Berger, R.6
  • 33
    • 0029065571 scopus 로고
    • Association of increased spontaneous mutation rates with high levels of transcription in yeast
    • Datta A, Jinks-Robertson S. Association of increased spontaneous mutation rates with high levels of transcription in yeast. Science 1995; 268:1616-9.
    • (1995) Science , vol.268 , pp. 1616-1619
    • Datta, A.1    Jinks-Robertson, S.2
  • 34
    • 0029881045 scopus 로고    scopus 로고
    • Sequences attaching loops of nuclear and mitochondrial DNA to underlying structures in human cells: The role of transcription units
    • Jackson DA, Bartlett J, Cook PR. Sequences attaching loops of nuclear and mitochondrial DNA to underlying structures in human cells: the role of transcription units. Nucleic Acids Res 1996; 24:1212-9.
    • (1996) Nucleic Acids Res , vol.24 , pp. 1212-1219
    • Jackson, D.A.1    Bartlett, J.2    Cook, P.R.3
  • 35
    • 0029030242 scopus 로고
    • Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts
    • Liu WM, Chu WM, Choudary PV, Schmid CW. Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts. Nucleic Acids Res 1995; 23:1758-65.
    • (1995) Nucleic Acids Res , vol.23 , pp. 1758-1765
    • Liu, W.M.1    Chu, W.M.2    Choudary, P.V.3    Schmid, C.W.4
  • 36
    • 0027428017 scopus 로고
    • Molecular characterization of a variant Ph1 translocation t(9;22;11) (q34;q11;q13) in chronic myelogenous leukemia (CML) reveals the translocation of the 3'-part of BCR gene to the chromosome band 11q13
    • Koduru PR, Goh JC, Pergolizzi RG, Lichtman SM, Broome JD. Molecular characterization of a variant Ph1 translocation t(9;22;11) (q34;q11;q13) in chronic myelogenous leukemia (CML) reveals the translocation of the 3'-part of BCR gene to the chromosome band 11q13. Oncogene 1993; 8:3239-47.
    • (1993) Oncogene , vol.8 , pp. 3239-3247
    • Koduru, P.R.1    Goh, J.C.2    Pergolizzi, R.G.3    Lichtman, S.M.4    Broome, J.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.