Large-scale protein modelling and integration with the SWISS-PROT and SWISS-2DPAGE databases: The example of Escherichia coli

Electrophoresis

Volumn 18, Issue 3-4, 1997, Pages 498-501

  Peitsch, Manuel C ^a,d   Wilkins, Marc R ^b,c   Tonella, Luisa ^c   Sanchez, Jean Charles ^c   Appel, Ron D ^c   Hochstrasser, Denis F ^b,c  

^a GlaxoSmithKline   (Switzerland)

^b UNIVERSITY OF GENEVA   (Switzerland)

^c GENEVA UNIVERSITY HOSPITALS   (Switzerland)

^d GLAXOSMITHKLINE   (United States)

Author keywords

Database; Escherichia coli; Protein modelling; Two dimensional polyacrylamide gel electrophoresis

Indexed keywords

BIOINFORMATICS; COMPUTER HARDWARE; COMPUTER PROGRAMMING; DATABASE SYSTEMS; ELECTROPHORESIS; KNOWLEDGE BASED SYSTEMS; PROTEINS;

HARDWARE AND SOFTWARE; KNOWLEDGE BASED; LARGE SCALE PROTEINS; MUTAGENESIS EXPERIMENT; PROTEIN DATA BANK; PROTEIN MODELS; RATIONAL DESIGN; SWISS-MODEL; SWISS-PROT; TWO-DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS;

ESCHERICHIA COLI;

COMPUTER PROGRAM; CONFERENCE PAPER; DATA BASE; ESCHERICHIA COLI; GENETIC PROCEDURES; INTERNET; MOLECULAR MODEL; MUTAGENESIS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN ANALYSIS; TECHNIQUE;

EID: 0031003429     PISSN: 01730835     EISSN: None     Source Type: Journal    
DOI: 10.1002/elps.1150180326     Document Type: Conference Paper

References (19)

1. Bairoch, A., Boeckmann, B., Nucleic Acids Res. 1993, 21, 3093-3096.
2. Chothia, C., Lesk, A. M., EMBO J. 1986, 5, 823-826.
3. Bajorath, J., Stenkamp, R., Aruffo, A., Prot. Sci. 1993, 2, 1798-1810.
4. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F., Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T., Tasumi, M., J. Mol. Biol. 1977, 112, 535-542.
5. Wilkins, M. R., Sanchez, J.-C., Gooley, A. A., Appel, R. D., Humphery-Smith, I., Hochstrasser, D. F., Williams, K. L., Biotechnol. and Genet. Eng. Rev. 1995, 13, 19-50.
6. Pasquali, C., Frutiger, S., Wilkins, M. R., Hughes, G. J., Appel, R. D., Bairoch, A., Schaller, D., Sanchez, J.-C., Hochstrasser, D. F., Electrophoresis 1995, 17, 547-555.
7. VanBogelen, R. A., Sanker, P., Clark, R. L., Bogan, J. A., Neidhardt, F. C., Electrophoresis 1992, 13, 1014-1054.
8. Garrels, J. I., Futcher, B., Kobayashi, R., Latter, I., Schwender, B., Volpe, T., Warner, J. R., McLaughlin, C. S., Electrophoresis 1994, 15, 1466-1486.
9. Sanchez, J.-C., Golaz, O., Frutiger, S., Schaller, D., Appel, R. D., Bairoch, A., Hughes, G., Hochstrasser, D. F., Electrophoresis 1996, 17, 556-565.
10. Wasinger, V., Cordwell, S. J., Cerpa-Poljak, A., Gooley, A. A., Wilkins, M. R., Duncan, M., Williams, K. L., Humphery-Smith, I., Electrophoresis 1995, 16, 1090-1094.
11. Peitsch, M. C., Bio/Technology 1995, 13, 658-660.
12. Peitsch, M. C., Biochem. Soc. Trans. 1996, 24, 274-279.
13. Appel, R. D., Bairoch, A., Hochstrasser, D. F., Trends Biochem. Sci. 1994, 19, 258-260.
14. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., Lipman, D. J., J. Mol. Biol. 1990, 215, 403-410.
15. Pearson, W. R., Lipman, D. J., Proc. Natl. Acad. Sci. USA 1988, 85, 2444-2448.
16. Huang, X., Miller, M., Adv. Appl. Math. 1991, 12, 337-357.
17. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., Karplus, M., J. Comp. Chem. 1983, 4, 187-217.
18. Guex, N., Peitsch, M. C., 1996, Executables can be obtained from http://expasy.hcuge.ch/.
19. Sayle, R. A., Milner-White, E. J., Trends Biochem. Sci. 1995, 20, 374-376.