-
1
-
-
0024095739
-
Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutant of Escherichia coli K 12
-
Arraiano CM, Yancey SD, Kushner SR. 1988. Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutant of Escherichia coli K 12. J Bacteriol 170:4625-4633.
-
(1988)
J Bacteriol
, vol.170
, pp. 4625-4633
-
-
Arraiano, C.M.1
Yancey, S.D.2
Kushner, S.R.3
-
2
-
-
0033548140
-
Polyadenylation promotes degradation of 3'-structured RNA by the Escherichia coli mRNA degradosome in vitro
-
Blum E, Carpousis AJ, Higgins CF. 1999. Polyadenylation promotes degradation of 3'-structured RNA by the Escherichia coli mRNA degradosome in vitro. J Biol Chem 274:4009-4016.
-
(1999)
J Biol Chem
, vol.274
, pp. 4009-4016
-
-
Blum, E.1
Carpousis, A.J.2
Higgins, C.F.3
-
3
-
-
0028269435
-
Co-purification of E. coli RNase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation
-
Carpousis AJ, Van Houwe G, Ehretsmann C, Krisch HM. 1994. Co-purification of E. coli RNase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76:889-900.
-
(1994)
Cell
, vol.76
, pp. 889-900
-
-
Carpousis, A.J.1
Van Houwe, G.2
Ehretsmann, C.3
Krisch, H.M.4
-
4
-
-
0030041546
-
Overexpression, purification and properties of Escherichia coli ribonuclease II
-
Coburn GA, Mackie GA. 1996. Overexpression, purification and properties of Escherichia coli ribonuclease II. J Biol Chem 271:1048-1053.
-
(1996)
J Biol Chem
, vol.271
, pp. 1048-1053
-
-
Coburn, G.A.1
Mackie, G.A.2
-
5
-
-
0032569032
-
Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes
-
Coburn GA, Mackie GA. 1998. Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes. J Mol Biol 279:1061-1074.
-
(1998)
J Mol Biol
, vol.279
, pp. 1061-1074
-
-
Coburn, G.A.1
Mackie, G.A.2
-
6
-
-
0032617132
-
Degradation of mRNA in Escherichia coli: An old problem with some new twists
-
Coburn GA, Mackie GA. 1999. Degradation of mRNA in Escherichia coli: An old problem with some new twists. Prog Nucleic Acid Res Mol Biol 62:55-108.
-
(1999)
Prog Nucleic Acid Res Mol Biol
, vol.62
, pp. 55-108
-
-
Coburn, G.A.1
Mackie, G.A.2
-
7
-
-
0026334860
-
Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis
-
Deutscher MP, Reuven NB. 1991. Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis. Proc Natl Acad Sci USA 88:3277-3280.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 3277-3280
-
-
Deutscher, M.P.1
Reuven, N.B.2
-
8
-
-
0003395950
-
Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12
-
Donovan WP, Kushner SR. 1986. Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12. Proc Natl Acad Sci USA 83:120-124.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 120-124
-
-
Donovan, W.P.1
Kushner, S.R.2
-
9
-
-
0026559344
-
Specificity of Escherichia coli endoribonuclease E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site
-
Ehretsmann CP, Carpousis AJ, Krisch HM. 1992. Specificity of Escherichia coli endoribonuclease E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes & Dev 6:149-159.
-
(1992)
Genes & Dev
, vol.6
, pp. 149-159
-
-
Ehretsmann, C.P.1
Carpousis, A.J.2
Krisch, H.M.3
-
10
-
-
77956904839
-
Polynucleotide phosphorylase
-
Boyer PD, ed. New York: Academic Press
-
Godefroy-Colburn T, Grunberg-Manago M. 1972. Polynucleotide phosphorylase. In: Boyer PD, ed. The enzymes. New York: Academic Press, pp 533-574.
-
(1972)
The Enzymes
, pp. 533-574
-
-
Godefroy-Colburn, T.1
Grunberg-Manago, M.2
-
11
-
-
0033368475
-
Messenger RNA stability and its role in control of gene expression in bacteria and phages
-
Grunberg-Manago M. 1999. Messenger RNA stability and its role in control of gene expression in bacteria and phages. Annu Rev Genet 33:193-227.
-
(1999)
Annu Rev Genet
, vol.33
, pp. 193-227
-
-
Grunberg-Manago, M.1
-
12
-
-
0029825005
-
Multiple degradation pathways of the rpsO mRNA of Escherichia coli. RNase E interacts with the 5′ and 3′ extremities of the primary transcript
-
Hajnsdorf E, Braun F, Haugel-Nielsen J, Le Derout J, Régnier P. 1996. Multiple degradation pathways of the rpsO mRNA of Escherichia coli. RNase E interacts with the 5′ and 3′ extremities of the primary transcript. Biochimie 78:416-424.
-
(1996)
Biochimie
, vol.78
, pp. 416-424
-
-
Hajnsdorf, E.1
Braun, F.2
Haugel-Nielsen, J.3
Le Derout, J.4
Régnier, P.5
-
14
-
-
0028310432
-
Nucleolytic inactivation and degradation of the RNase III processed pnp message encoding polynucleotide phosphorylase of Escherichia coli
-
Hajnsdorf E, Carpousis AJ, Régnier P. 1994a. Nucleolytic inactivation and degradation of the RNase III processed pnp message encoding polynucleotide phosphorylase of Escherichia coli. J Mol Biol 239:439-454.
-
(1994)
J Mol Biol
, vol.239
, pp. 439-454
-
-
Hajnsdorf, E.1
Carpousis, A.J.2
Régnier, P.3
-
15
-
-
0344389019
-
E. coli rpsO mRNA decay: RNase E processing at the beginning of the coding sequence stimulates Poly(A)-dependent degradation of the mRNA
-
Hajnsdorf E, Régnier P. 1999. E. coli rpsO mRNA decay: RNase E processing at the beginning of the coding sequence stimulates Poly(A)-dependent degradation of the mRNA. J Mol Biol 286: 1033-1043.
-
(1999)
J Mol Biol
, vol.286
, pp. 1033-1043
-
-
Hajnsdorf, E.1
Régnier, P.2
-
16
-
-
0034652188
-
Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I
-
Hajnsdorf E, Régnier P. 2000. Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I. Proc Natl Acad Sci USA 97:1501-1505.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 1501-1505
-
-
Hajnsdorf, E.1
Régnier, P.2
-
17
-
-
0028235826
-
Roles of RNase E, RNase II and PNPase in the degradation of the rpsO transcripts of Escherichia coli: Stabilizing function of RNase II and evidence for efficient degradation in an ams-pnp-rnb mutant
-
Hajnsdorf E, Steier O, Coscoy L, Teysset L, Régnier P. 1994b. Roles of RNase E, RNase II and PNPase in the degradation of the rpsO transcripts of Escherichia coli: Stabilizing function of RNase II and evidence for efficient degradation in an ams-pnp-rnb mutant. EMBO J 13:3368-3377.
-
(1994)
EMBO J
, vol.13
, pp. 3368-3377
-
-
Hajnsdorf, E.1
Steier, O.2
Coscoy, L.3
Teysset, L.4
Régnier, P.5
-
18
-
-
0029891493
-
The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation
-
Haugel-Nielsen J, Hajnsdorf E, Régnier P. 1996. The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation. EMBO J 15:3144-3152.
-
(1996)
EMBO J
, pp. 3144-3152
-
-
Haugel-Nielsen, J.1
Hajnsdorf, E.2
Régnier, P.3
-
19
-
-
0002404647
-
The role of 3′ end in mRNA stability and decay
-
Belasco JG, Brawerman G, eds. New York: Academic Press
-
Higgins CF, Causton HC, Dance GSC, Mudd EA. 1993. The role of 3′ end in mRNA stability and decay. In: Belasco JG, Brawerman G, eds. Control of messenger RNA stability. New York: Academic Press, pp 13-30.
-
(1993)
Control of Messenger RNA Stability
, pp. 13-30
-
-
Higgins, C.F.1
Causton, H.C.2
Dance, G.S.C.3
Mudd, E.A.4
-
20
-
-
0031952026
-
Poly(A) and poly(U) specific RNA 3′ tail shortening by E. coli ribonuclease E
-
Huang H, Liao J, Cohen SN. 1998. Poly(A) and poly(U) specific RNA 3′ tail shortening by E. coli ribonuclease E. Nature 391:99-102.
-
(1998)
Nature
, vol.391
, pp. 99-102
-
-
Huang, H.1
Liao, J.2
Cohen, S.N.3
-
22
-
-
0031230045
-
The position of site-directed cleavage of RNA using RNase H and 2'-O-methyl oligonucleotides is dependent on the enzyme source
-
Lapham J, Yu YT, Shu MD, Steitz JA, Crothers DM. 1997. The position of site-directed cleavage of RNA using RNase H and 2'-O-methyl oligonucleotides is dependent on the enzyme source. RNA 3:950-951.
-
(1997)
RNA
, vol.3
, pp. 950-951
-
-
Lapham, J.1
Yu, Y.T.2
Shu, M.D.3
Steitz, J.A.4
Crothers, D.M.5
-
23
-
-
0029151159
-
The tRNA processing enzyme RNase T is essential for maturation of 5S RNA
-
Li Z, Deutscher MP. 1995. The tRNA processing enzyme RNase T is essential for maturation of 5S RNA. Proc Natl Acad Sci USA 92:6883-6886.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 6883-6886
-
-
Li, Z.1
Deutscher, M.P.2
-
24
-
-
0032539857
-
3′ exoribonucleolytic trimming is a common feature of the maturation of small, stable RNAs in Escherichia coli
-
Li Z, Pandit S, Deutscher MP. 1998. 3′ exoribonucleolytic trimming is a common feature of the maturation of small, stable RNAs in Escherichia coli. Proc Natl Acad Sci USA 95:2856-2861.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 2856-2861
-
-
Li, Z.1
Pandit, S.2
Deutscher, M.P.3
-
25
-
-
0032951885
-
Maturation of 23S ribosomal RNA requires the exoribonuclease RNase T
-
Li Z, Pandit S, Deutscher MP. 1999. Maturation of 23S ribosomal RNA requires the exoribonuclease RNase T. RNA 5:139-146.
-
(1999)
RNA
, vol.5
, pp. 139-146
-
-
Li, Z.1
Pandit, S.2
Deutscher, M.P.3
-
26
-
-
0025740223
-
mRNA degradation by processive 3′-5′ exonucleases in vitro and the implication for prokaryotic mRNA decay in vivo
-
McLaren RS, Newbury SF, Dance GSC, Causton HC, Higgins CF. 1991. mRNA degradation by processive 3′-5′ exonucleases in vitro and the implication for prokaryotic mRNA decay in vivo. J Mol Biol 221:81-95.
-
(1991)
J Mol Biol
, vol.221
, pp. 81-95
-
-
McLaren, R.S.1
Newbury, S.F.2
Dance, G.S.C.3
Causton, H.C.4
Higgins, C.F.5
-
27
-
-
0029976430
-
Proteins associated with RNase E in a multicomponent ribonucleolytic complex
-
Miczak A, Kaberdin VR, Wei C-L, Lin-Chao S. 1996. Proteins associated with RNase E in a multicomponent ribonucleolytic complex. Proc Natl Acad Sci USA 93:3865-3869.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 3865-3869
-
-
Miczak, A.1
Kaberdin, V.R.2
Wei, C.-L.3
Lin-Chao, S.4
-
28
-
-
0033457296
-
Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism
-
Mohanty BK, Kushner SR. 1999a. Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism. Mol Microbiol 34:1094-1108.
-
(1999)
Mol Microbiol
, vol.34
, pp. 1094-1108
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
29
-
-
0033406278
-
Residual polyadenylation in poly(A) polymerase I (pcnB) mutants of Escherichia coli does not result from the activity encoded by the f310 gene
-
Mohanty BK, Kushner SR. 1999b. Residual polyadenylation in poly(A) polymerase I (pcnB) mutants of Escherichia coli does not result from the activity encoded by the f310 gene. Mol Microbiol 34: 1109-1119.
-
(1999)
Mol Microbiol
, vol.34
, pp. 1109-1119
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
30
-
-
0025688893
-
RNase E, an endoribonuclease, has a general role in the chemical decay of E. coli mRNA: Evidence that me and ams are the same genetic locus
-
Mudd EA, Krisch HM, Higgins CF. 1990. RNase E, an endoribonuclease, has a general role in the chemical decay of E. coli mRNA: Evidence that me and ams are the same genetic locus. Mol Microbiol 4:2127-2135.
-
(1990)
Mol Microbiol
, vol.4
, pp. 2127-2135
-
-
Mudd, E.A.1
Krisch, H.M.2
Higgins, C.F.3
-
31
-
-
0001899053
-
Escherichia coli ribonucleases-paradigms for understanding cellular RNA-metabolism and regulation
-
D'Alesio G, Riordan JF, eds. San Diego: Academic Press
-
Nicholson AW. 1997. Escherichia coli ribonucleases-paradigms for understanding cellular RNA-metabolism and regulation. In: D'Alesio G, Riordan JF, eds. Ribonucleases structures and functions. San Diego: Academic Press, pp 1-49.
-
(1997)
Ribonucleases Structures and Functions
, pp. 1-49
-
-
Nicholson, A.W.1
-
32
-
-
0342710962
-
The processive degradation of individual polyribonucleotides chains. I. Escherichia coli ribonuclease II
-
Nossal NG, Singer MF. 1968. The processive degradation of individual polyribonucleotides chains. I. Escherichia coli ribonuclease II. J Biol Chem 252:8945-8949.
-
(1968)
J Biol Chem
, vol.252
, pp. 8945-8949
-
-
Nossal, N.G.1
Singer, M.F.2
-
33
-
-
0028986829
-
Polyadenylation helps regulate mRNA decay in Escherichia coli
-
O'Hara EB, Chekanova JA, Ingle CA, Kushner ZR, Peters E, Kushner SR. 1995. Polyadenylation helps regulate mRNA decay in Escherichia coli. Proc Natl Acad Sci USA 92:1807-1811.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 1807-1811
-
-
O'Hara, E.B.1
Chekanova, J.A.2
Ingle, C.A.3
Kushner, Z.R.4
Peters, E.5
Kushner, S.R.6
-
34
-
-
0028076787
-
Decay of the IS10 antisense RNA by 3′ exonucleases: Evidence that RNase II stabilizes RNA-OUT against PNPase attack
-
Pepe CM, Maslesa-Galic S, Simons RW. 1994. Decay of the IS10 antisense RNA by 3′ exonucleases: Evidence that RNase II stabilizes RNA-OUT against PNPase attack. Mol Microbiol 13:1133-1142.
-
(1994)
Mol Microbiol
, vol.13
, pp. 1133-1142
-
-
Pepe, C.M.1
Maslesa-Galic, S.2
Simons, R.W.3
-
35
-
-
0029922992
-
A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
-
Py B, Higgins CF, Krisch HM, Carpousis AJ. 1996. A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381: 169-172.
-
(1996)
Nature
, vol.381
, pp. 169-172
-
-
Py, B.1
Higgins, C.F.2
Krisch, H.M.3
Carpousis, A.J.4
-
36
-
-
0242400018
-
Degradation of mRNA in bacteria: Emergence of ubiquitous features
-
Régnier P, Arraiano CM. 2000. Degradation of mRNA in bacteria: Emergence of ubiquitous features. BioEssays 22:235-244.
-
(2000)
BioEssays
, vol.22
, pp. 235-244
-
-
Régnier, P.1
Arraiano, C.M.2
-
37
-
-
0025649204
-
RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expression
-
Régnier P, Grunberg-Manago M. 1990. RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expression. Biochimie 72:825-834.
-
(1990)
Biochimie
, vol.72
, pp. 825-834
-
-
Régnier, P.1
Grunberg-Manago, M.2
-
38
-
-
0025973574
-
Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3′ stabilizing stem and loop structure
-
Régnier P, Hajnsdorf E. 1991. Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3′ stabilizing stem and loop structure. J Mol Biol 217:283-292.
-
(1991)
J Mol Biol
, vol.217
, pp. 283-292
-
-
Régnier, P.1
Hajnsdorf, E.2
-
39
-
-
0023041808
-
Initiation, attenuation and RNase III processing of transcripts from the E. coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase
-
Régnier P, Portier C. 1986. Initiation, attenuation and RNase III processing of transcripts from the E. coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase. J Mol Biol 187: 23-32.
-
(1986)
J Mol Biol
, vol.187
, pp. 23-32
-
-
Régnier, P.1
Portier, C.2
-
40
-
-
0031009317
-
Polyadenylation of mRNA in prokaryotes
-
Sarkar N. 1997. Polyadenylation of mRNA in prokaryotes. Annu Rev Biochem 66:173-197.
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 173-197
-
-
Sarkar, N.1
-
41
-
-
0013791293
-
Purification and properties of a potassium-activated phosphodiesterase (RNase II) from Escherichia coli
-
Singer MF, Tolbert G. 1965. Purification and properties of a potassium-activated phosphodiesterase (RNase II) from Escherichia coli. Biochemistry 4:1319-1330.
-
(1965)
Biochemistry
, vol.4
, pp. 1319-1330
-
-
Singer, M.F.1
Tolbert, G.2
-
42
-
-
3543037550
-
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
-
Vanzo NF, Li YS, Py B, Blum E, Higgins CF, Raynal LC, Krisch HM, Carpousis AJ. 1998. Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome. Genes & Dev 12:2770-2781.
-
(1998)
Genes & Dev
, vol.12
, pp. 2770-2781
-
-
Vanzo, N.F.1
Li, Y.S.2
Py, B.3
Blum, E.4
Higgins, C.F.5
Raynal, L.C.6
Krisch, H.M.7
Carpousis, A.J.8
-
43
-
-
0028945837
-
RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation
-
Xu F, Cohen SN. 1995. RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation. Nature 374:180-183.
-
(1995)
Nature
, vol.374
, pp. 180-183
-
-
Xu, F.1
Cohen, S.N.2
-
44
-
-
0027267498
-
The Escherichia coli pcnB gene promotes adenylation of antisense RNA I of ColE1-type plasmids in vivo and degradation of RNA I decay intermediate
-
Xu F, Lin-Chao S, Cohen SN. 1993. The Escherichia coli pcnB gene promotes adenylation of antisense RNA I of ColE1-type plasmids in vivo and degradation of RNA I decay intermediate. Proc Natl Acad Sci USA 90:6756-6760.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6756-6760
-
-
Xu, F.1
Lin-Chao, S.2
Cohen, S.N.3
-
45
-
-
0030007719
-
PNPase modulates RNase II expression in Escherichia coli: Implications for mRNA decay and cell metabolism
-
Zilhão R, Cairrão F, Régnier P, Arraiano CM. 1996. PNPase modulates RNase II expression in Escherichia coli: Implications for mRNA decay and cell metabolism. Mol Microbiol 20:1033-1042.
-
(1996)
Mol Microbiol
, vol.20
, pp. 1033-1042
-
-
Zilhão, R.1
Cairrão, F.2
Régnier, P.3
Arraiano, C.M.4
-
46
-
-
0027531685
-
DNA sequencing and expression of the gene rnb encoding Escherichia coli ribonuclease II
-
Zilhão R, Camelo L, Arraiano CM. 1993. DNA sequencing and expression of the gene rnb encoding Escherichia coli ribonuclease II. Mol Microbiol 8:43-51.
-
(1993)
Mol Microbiol
, vol.8
, pp. 43-51
-
-
Zilhão, R.1
Camelo, L.2
Arraiano, C.M.3
|