Application of BARE-1 retrotransposon markers to the mapping of a major resistance gene for net blotch in barley

Molecular and General Genetics

Volumn 264, Issue 3, 2000, Pages 325-334

  Manninen, O ^a   Kalendar, R ^b   Robinson, J ^b   Schulman, A H ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b PLANT PRODUCTION RESEARCH   (Finland)

Author keywords

BARE 1 retrotransposon; Barley; Linkage mapping; Net blotch resistance; Quantitative trait locus (QTL)

Indexed keywords

AGRICULTURE; ARTICLE; BARLEY; CHROMOSOME MAP; FUNGUS; GENE MAPPING; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; RETROPOSON;

ALLELES; CHROMOSOME MAPPING; CROSSES, GENETIC; GENES, PLANT; GENETIC MARKERS; HORDEUM; IMMUNITY, NATURAL; LINKAGE (GENETICS); MICROSATELLITE REPEATS; MODELS, GENETIC; PLANT PROTEINS; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; QUANTITATIVE TRAIT, HERITABLE; RETROELEMENTS;

BACTERIA (MICROORGANISMS); FUNGI; HORDEUM VULGARE SUBSP. VULGARE; PYRENOPHORA TERES;

EID: 0033764322     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380000326     Document Type: Article

References (61)

1. Inheritance of partial resistance to net blotch in barley
2. Molecular mapping of genes determining height, time to heading, and growth habit in barley (Hordeum vulgare)
3. Barley microsatellites: Allele variation and mapping
4. Combined mapping of AFLP and RFLP markers in barley
5. Trisomic analysis of genes for resistance to scald and net blotch in several barley cultivars
6. Ty elements transpose through an RNA intermediate
7. The barley Mlo gene: A novel control element of plant pathogen resistance
8. An AFLP-based procedure for the efficient mapping of mutations and DNA probes in barley
9. Inheritance of resistance to net blotch in barley in Morocco
10. Ty1-copia class retrotransposon insertion site polymorphism for linkage and diversity analysis in pea
11. Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants
12. Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis
13. Construction of an RFLP map of barley
14. RFLP mapping of a gene in barley conferring resistance to net blotch (Pyrenophora teres)
15. Phylogeny and transpositional activity of Ty1-copia group retrotransposons in cereal genomes
16. Genetic studies on net blotch resistance in a barley cross
17. Stable resistance in barley to Pyrenophora teres f. teres isolates from the Nordic-Baltic region after increase on standard host genotypes
18. IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques
19. Inheritance of resistance to net blotch in barley. I. Factors affecting the penetrance and expressivity of gene(s) conditioning host resistance
20. Plant retrotransposons
21. Transposable element-host interactions: Regulation of insertion and excision
22. Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps
23. Development of simple sequence repast DNA markers and their integration into a barley linkage map
24. The viruses in all of us: Characteristics and biological significance of human endogenous retrovirus sequences
25. Optimizing anther culture for barley breeding
26. Associations between anther culture response and molecular markers on chromosomes 2H, 3H, and 4H of barley (Hordeum vulgare L.)
27. Genetic diversity among Finnish six-rowed barley cultivars based on pedigree information and DNA markers
28. BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.)
29. Occurrence of Helmintosporium species on cereals in Finland in 1971-1973
30. Two additional factors for resistance to net blotch in barley
31. Inheritance and RAPD tagging of multiple genes for resistance to net blotch in barley
32. Non-LTR retrotransposons (LINEs) as ubiquitous components of plant genomes
33. A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome
34. Abundance and polymorphism of simple repetitive DNA sequences in Brassica napus L
35. Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley
36. Mapping of quantitative trait loci affecting Drechslera teres resistance in barley with molecular markers
37. A possible technique for isolating genic DNA for quantitative traits in plants
38. Diversity among Finnish net blotch isolates and resistance in barley
39. Quantitative resistance to Pyrenophora teres in six Nordic spring barley accessions
40. Discriminating between barley genotypes using microsatellite markers
41. Nested retrotransposons in the intergenic regions of the maize genome
42. Molecular evidence from retroposons that whales form a clade within even-toed ungulates
43. Net blotch of barley
44. A contiguous 66 kb barley DNA sequence provides evidence for reversible genome expansion
45. AFLP-based fine mapping of the Mlo gene to a 30-kb DNA segment of the barley genome
46. Mapping of disease resistance loci in barley based on the visual assessment of naturally occurring symptoms
47. Net blotch
48. Quantitative resistance to Pyrenophora teres f. teres in barley
49. Genetics of seedling and adult plant resistance to net blotch (Pyrenophora teres f. teres) and spot blotch (Cochliobolus sativus) in barley
50. Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome
51. BARE-1 insertion site preferences and evolutionary conservation of RNA and cDNA processing sites
52. Gypsy-like retrotransposons are widespread in the plant kingdom
53. A numerical scale to classify reactions of barley to Pyrenophora teres
54. MQTL: Software for simplified composite interval mapping of QTL in multiple environments
55. An explanation of the decimal code for the growth stages of cereals, with illustrations
56. Retrotransposon BARE-1 and its role in genome evolution in the genus Hordeum
57. Copia-like retrotransposons are ubiquitous among plants
58. Genetic distribution of BARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)
59. Inheritance of resistance to Pyrenophora teres in Minnesota barley
60. Identification and mapping of a gene conferring resistance to the spot form of net blotch (Pyrenophora teres f maculata) in barley