Identification of Mycobacterium tuberculosis RNAs synthesized in response to phagocytosis by human macrophages by selective capture of transcribed sequences (SCOTS)

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 20, 1999, Pages 11554-11559

  Graham, James E ^a,b   Clark Curtiss, Josephine E ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b VANDERBILT UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; CATION TRANSPORTER; COMPLEMENTARY DNA; ENDONUCLEASE; ISOCITRATE LYASE; PENICILLIN BINDING PROTEIN; POLYKETIDE SYNTHASE; SIGMA FACTOR; UNCLASSIFIED DRUG;

ANALYTIC METHOD; ARTICLE; BACTERIAL VIRULENCE; CATION TRANSPORT; DIAGNOSTIC ACCURACY; GENE EXPRESSION REGULATION; MACROPHAGE ACTIVATION; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PHAGOCYTOSIS; PRIORITY JOURNAL; RNA ANALYSIS; RNA SEQUENCE; TRANSCRIPTION REGULATION;

BACTERIAL PROTEINS; CELLS, CULTURED; DNA, COMPLEMENTARY; HUMANS; MACROPHAGES; MYCOBACTERIUM TUBERCULOSIS; PHAGOCYTOSIS; RNA, BACTERIAL; RNA, MESSENGER; SIGMA FACTOR; TRANS-ACTIVATORS;

BACILLI; BACTERIA (MICROORGANISMS); MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS; SIGE;

EID: 0033613213     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.20.11554     Document Type: Article

References (49)

1. Murray, C. J. & Salomon, J. A. (1998) Proc. Natl. Acad. Sci. USA 95, 13881-13886.
2. Dannenberg, A. M. & Rook, G. A. W. (1994) in Tuberculosis: Pathogenesis, Protection, and Control, ed. Bloom, B. R. (ASM Press, Washington, DC), pp. 459-484.
3. Scott-Craig, J. S., Guerinot, M. L. & Chelm, B. K. (1991) Mol. Gen. Genet. 228, 356-360.
4. Abshire, K. Z. & Neidhardt, F. C. (1993) J. Bacteriol. 175, 3734-3743.
5. Mahan, M. J., Slauch, J. M. & Mekalanos, J. J. (1993) Science 259, 686-688.
6. Plum, G. & Clark-Curtiss, J. E. (1994) Infect. Immun. 62, 476-483.
7. Hensel, M., Shea, J. E., Gleeson, C., Jones, M. D., Dalton, E. & Holden, D. W. (1995) Science 269, 400-403.
8. Abu Kwaik, Y. & Pederson, L. L. (1996) Mol. Microbiol. 21, 543-556.
9. Valdivia, R. H. & Falkow, S. (1997) Science 277, 2007-2011.
10. de Saizieu, A., Certa, U., Warrington, J., Gray, C., Keck, W. & Mous, J. (1998) Nat. Biotechnol. 16, 45-48.
11. Ko, M. S. (1990) Nucleic Acids Res. 18, 5705-5711.
12. Schlesinger, L. S. & Horwitz, M. A. (1991) J. Immunol. 147, 1983-1994.
13. Clemens, D. L. & Horwitz, M. A. (1995) J. Exp. Med. 181, 257-270.
14. Clark-Curtiss, J. E., Jacobs, W. R., Docherty, M. A., Ritchie, L. R. & Curtiss, R., III (1985) J. Bacteriol. 161, 1093-1102.
15. van Soolingen, D., de Haas, P. E., Hermans, P. W. & van Embden, J. D. (1994) Methods Enzymol. 235, 196-205.
16. Cheung, A. L., Eberhardt, K. J. & Fischetti, V. A. (1994) Anal. Biochem. 222, 511-514.
17. Chomczynski, P. & Sacchi, N. (1987) Anal. Biochem. 162, 156-159.
18. Froussard, P. (1992) Nucleic Acids Res. 20, 2900.
19. Innis, M. A., Gelfand, D. H., Sninsky, J. J. & White, T. J. (1990) PCR Protocols: A Guide to Methods and Applications (Academic Press, San Diego).
20. Hahn, W. E., Pettijohn, D. E. & Van Ness, J. (1977) Science 197, 582-585.
21. Wieland, I., Bolger, G., Asouline, G. & Wigler, M. (1990) Proc. Natl. Acad. Sci. USA 87, 2720-2724.
22. Manganelli, R., Dubnau, E., Tyagi, S., Kramer, F. R. & Smith, I. (1999) Mol. Microbiol. 31, 715-724.
23. Lee, B. Y. & Horwitz, M. A. (1995) J. Clin. Invest. 96, 245-249.
24. Heithoff, D. M., Conner, C. P., Hanna, P. C., Julio, S. M., Hentschel, U. & Mahan, M. J. (1997) Proc. Natl. Acad. Sci. USA 94, 934-939.
25. Mei, J. M., Nourbakhsh, F., Ford, C. W. & Holden, D. W. (1997) Mol. Microbiol. 26, 399-407.
26. Lowe, A. M., Beattie, D. T. & Deresiewicz, R. L. (1998) Mol. Microbiol. 27, 967-976.
27. Polissi, A., Pontiggia, A., Feger, G., Altieri, M., Mottl, H., Ferrari, L. & Simon, D. (1998) Infect. Immun. 66, 5620-5629.
28. Arruda, S., Bomfim, G., Knights, R., Huima-Byron, T. & Riley, L. W. (1993) Science 261, 1454-1457.
29. Sonnhammer, E. L. L., von Heijne, G. & Krogh, A. (1998) in Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (AAAI Press, Menlo Park, CA).
30. Alland, D., Kramnik, I., Weisbrod, T. R., Otsubo, L., Cerny, R., Miller, L. P., Jacobs, W. R., Jr., & Bloom, B. R. (1998) Proc. Natl. Acad. Sci. USA 95, 13227-13232.
31. Ko, M. S., Ko, S. B., Takahashi, N., Nishiguchi, K. & Abe, K. (1990) Nucleic Acids Res. 18, 4293-4294.
32. Grothues, D., Cantor, C. R. & Smith, C. L. (1993) Nucleic Acids Res. 21, 1321-1322.
33. Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E., III, et al. (1998) Nature (London) 393, 537-544.
34. DeMaio, J., Zhang, Y., Ko, C., Young, D. B. & Bishai, W. R. (1996) Proc. Natl. Acad. Sci. USA 93, 2790-2794.
35. Humphreys, S., Stevenson, A., Bacon, A., Weinhardt, A. B. & Roberts, M. (1999) Infect. Immun. 67, 1560-1568.
36. Missiakas, D. & Raina, S. (1998) Mol. Microbiol. 28, 1059-1066.
37. Heithoff, D. M., Conner, C. P. & Mahan, M. J. (1997) Trends Microbiol. 5, 509-513.
38. Garcia Vescovi, E., Soncini, F. C. & Groisman, E. A. (1996) Cell 84, 165-174.
39. Coulter, S. N., Schwan, W. R., Ng, E. Y., Langhorne, M. H., Ritchie, H. D., Westbrock-Wadman, S., Hufnagle, W. O., Folger, K. R., Bayer, A. S. & Stover, C. K. (1998) Mol. Microbiol. 30, 393-404.
40. Young, G. M. & Miller, V. L. (1997) Mol. Microbiol. 25, 319-328.
41. Schlesinger, L. S. (1996) J. Invest. Med. 44, 312-323.
42. Fang, F. C. (1997) J. Clin. Invest. 99, 2818-2825.
43. Murray, T., Popham, D. L. & Setlow, P. (1998) J. Bacteriol. 180, 4555-4563.
44. Chubb, A. J., Woodman, Z. L., da Silva Tatley, F. M., Hoffmann, H. J., Scholle, R. R. & Ehlers, M. R. (1998) Microbiology 144, 1619-1629.
45. Romero, D. & Palacios, R. (1997) Annu. Rev. Genet. 31, 91-111.
46. Kolattukudy, P. E., Fernandes, N. D., Azad, A. K., Fitzmaurice, A. M. & Sirakova, T. D. (1997) Mol. Microbiol. 24, 263-270.
47. George, K. M., Chatterjee, D., Gunawardana, G., Welty, D., Hayman, J., Lee, R. & Small, P. L. (1999) Science 283, 854-857.
48. Motamedi, H., Cai, S. J., Shafiee, A. & Elliston, K. O. (1997) Eur. J. Biochem. 244, 74-80.
49. Hu, K. H., Liu, E., Dean, K., Gingras, M., DeGraff, W. & Trun, N. J. (1996) Genetics 143, 1521-1532.