Modeling studies of the interactions between the insulin receptor kinase domain and protein tyrosine phosphatase 1B

Journal of the American Chemical Society

Volumn 121, Issue 15, 1999, Pages 3579-3589

  Glover, Nicholas R ^a,b   Tracey, Alan S ^a  

^a SIMON FRASER UNIVERSITY   (Canada)

^b University Medical Discoveries Inc   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

INSULIN RECEPTOR; INSULIN RECEPTOR KINASE; PROTEIN TYROSINE PHOSPHATASE;

ARTICLE; MODEL; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE;

EID: 0033594330     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja984354q     Document Type: Article

References (60)

1. White, M. F.; Kahn, C. R. J. Biol. Chem. 1994, 269, 1-4.
2. Lee, J.; Pilch, P. F. Am. J. Physiol. 1994, 266, C319-C334.
3. Drake, P. G.; Bevan, A. P.; Burgess, J. W.; Bergeron, J. J. M.; Posner, B. I. Endocrinology 1996, 137, 4960-4968.
4. Li, P.-M; Zhang, W.-R.; Goldstein, B. J. Cell. Signalling 1996, 8, 467-473.
5. Kenner, K. A.; Anyanwu, E.; Olefsky, J. M.; Kusari, J. J. Biol. Chem. 1996, 271, 19810-19816.
6. Kulas, D. T.; Goldstein, B. J.; Mooney, R. A. J. Biol. Chem. 1996, 271, 748-754.
7. Ahmad, F.; Goldstein, B. J. J. Biol. Chem. 1997, 272, 448-457.
8. Bandyopadhyay, D.; Kusari, A.; Kenner, K. A.; Liu, F.; Chernoff, J.; Gustafson, T. A.; Kusari, J. J. Biol. Chem. 1997, 272, 1639-1645.
9. Seely, B. L.; Staubs, P. A.; Reichart, D. R.; Berhanu, P.; Milarski. K. L.; Saltiel, A. R.; Kusari, J.; Olefsky, J. M. Diabetes 1996, 45, 1379-1385.
10. Byon, J. C. H.; Kusari, A. B.; Kusari, J. Mol. Cell. Biochem. 1998, 182, 101-108.
11. Hubbard, S. R.; Wei, L.; Ellis, L.; Hendrickson, W. A. Nature 1994, 372, 746-754.
12. Hubbard, S. R. EMBO J. 1997, 16, 5572-5581.
13. Hubbard, S. R. Personal Communication, 1998.
14. Ramachandran, C.; Aebersold, R.; Tonks, N. K.; Pot, D. A. Biochemistry 1992, 31, 4232-4238.
15. Desmarais, S.; Jia, Z.; Ramachandran, C. Arch. Biochem. Biophys. 1998, 354, 225-231.
16. Glover, N. R.; Tracey, A. S. Biochemistry, in press.
17. Huyer, G.; Liu, S.; Kelly, J.; Moffat, J.; Payette, P.; Kennedy, B.; Tsaprailis, G.; Gresser, M. J.; Ramachandran, C. J. Biol. Chem. 1997, 272, 843-851.
18. Bradford, M. M. Anal. Biochem. 1976, 72, 248-254.
19. Mach, H.; Middaugh, C. R.; Lewis, R. V. Anal. Biochem. 1992, 200, 74-80.
20. Nxumalo, F. Influence of vanadium complexes on the catalytic activity of the protein tyrosine phosphatases. M.Sc. Thesis, Simon Fraser University, Canada, 1997.
21. Marion, D.; Wüthrich, K. Biochem. Biophys. Res. Commun. 1983, 113, 967-974.
22. Piotto, M.; Saudek, V.; Sklenár, V. J. Biomol. NMR 1992, 2, 661-665.
23. Jeener, J.; Meier, B. H.; Bachman, P.; Earnst, R. R. J. Chem. Phys. 1979, 71, 4546-4553.
24. Bax, A.; Davis, D. G. J. Magn. Reson. 1985, 65, 355-360.
25. Wider, G.; Macura, S.; Ernst, R. R.; Wüthrich, K. J. Magn. Reson. 1984, 56, 207-234.
26. Braunschweiler, L.; Ernst, R. R. J. Magn. Reson. 1983, 53, 521-558.
27. Piatini, U.; Sorensen, O. W.; Ernst, R. R. J. Am. Chem. Soc. 1982, 104, 4, 6800-6801.
28. Rance, M.; Sorensen, O. W.; Bodenhausen, G.; Wagner, G.; Ernst, R. R.; Wüthrich, K. Biochem. Biophys. Res. Commun. 1983, 117, 479-485.
29. Biosym/MSI. InsightII Molecular Modeling System (v. 95.0); Biosym/MSI: San Diego, CA, 1995.
30. Biosym/MSI. Discover (v. 2.9.7./95.0/3.0.0); Biosym/MSI: San Diego, CA, 1995.
31. Oshiro, C. M.; Kuntz, I. D.; Dixon, J. S. J. Comput.-Aided. Mol. Des. 1995, 9, 113-130.
32. Leach, A. R. Molecular Modelling: Principles and Applications; Addison-Wesley Longman, Ltd.: Harlow, Essex, UK, 1996.
33. van Gunsteren, W. F.; Mark, A. E. Eur. J. Biochem. 1992, 204, 947-961.
34. Lee, B.; Richards, F. M. J. Mol. Biol. 1971, 55, 379-400.
35. Hubbard, S. J.; Thornton, J. M. NACCESS; Department of Biochemistry and Molecular Biology, University College: London, 1993.
36. Wüthrich, K. NMR of Proteins and Nucleic Acids; John Wiley & Sons: New York, 1986.
37. Ni, F. Prog. Nucl. Magn. Reson. Spectrosc. 1994, 26, 517-606.
38. Dyson, H. J.; Wright, P. E. Annu. Rev. Biophys. Biophys. Chem. 1991, 20, 519-538.
39. Daggett, V.; Levitt, M. Annu. Rev. Biophys. Biomol. Struct. 1993, 22, 353-380.
40. Kollman, P. A. Curr. Opin. Struct. Biol. 1994, 4, 240-245.
41. Glover, N. R.; Tracey, A. S. Structure, modelling and molecular dynamics studies of the inhibition of protein tyrosine phosphatase 1B by sulfotyrosine peptides. Unpublished work, 1998.
42. Zhang, Z.-Y. Curr. Top. Cell. Regul. 1997, 35, 21-68.
43. Jia, Z.; Barford, D.; Flint, A. J.; Tonks, N. K. Science 1995, 268, 1754-1758.
44. Katchalski-Katzir, E.; Shariv, I.; Eisenstein, M.; Friesen, A. A.; Aflalo, C.; Vasker, I. A. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 2195-2199.
45. Vasker, I. A. Protein Eng. 1995, 8, 371-377.
46. Janin, J.; Miller, S.; Chothia, C. J. Mol. Biol. 1988, 204, 155-164.
47. Jones, S.; Thornton, J. M. Prog. Biophys. Mol. Biol. 1995, 63, 31-65.
48. Tsai, C.-J.; Lin, S. L.; Wolfson, H. J.; Nussinov, R. Protein Sci. 1997, 6, 53-64.
49. Stites, W. E. Chem. Rev. 1997, 97, 1233-1250.
50. Janin, J.; Chothia, C. J. Biol. Chem. 1990, 265, 16027-16030.
51. Jones, S.; Thornton, J. M. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 13-20.
52. Young, L.; Jernigan, R. L.; Covell, D. G. Protein Sci. 1994, 3, 717-729.
53. Laskowski, R. A. SURFNET; Department of Biochemistry and Molecular Biology, University College: London, 1991.
54. van Gunsteren, W. F. Curr. Opin. Struct. Biol. 1993, 3, 277-281.
55. Muegge, I.; Schweins, T.; Warshel, A. Proteins: Struct., Fund. Genet. 1998, 30, 407-423.
56. Puius, Y. A.; Zhao, Y.; Lawrence, D. S.; Almo, S. A.; Zhang, Z.- Y. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 13420-13425.
57. McDonald, I. K.; Thornton, J. M. J. Mol. Biol. 1994, 238, 777-793.
58. Connolly, M. L. J. Appl. Crystallogr. 1983, 16, 548-558.
59. Connolly, M. L. Science 1983, 221, 709-713.
60. Nicholls, A.; Sharp, K. A.; Honig, B. Proteins 1991, 11, 281-296.