-
1
-
-
0026337077
-
The coagulation cascade: Initiation, maintenance, and regulation
-
Davie, E. W.; Fujikawa, K.; Kisiel, W. The Coagulation Cascade: Initiation, Maintenance, and Regulation. Biochemistry 1991, 30, 10363-10370.
-
(1991)
Biochemistry
, vol.30
, pp. 10363-10370
-
-
Davie, E.W.1
Fujikawa, K.2
Kisiel, W.3
-
3
-
-
0027409404
-
A player of many parts: The spotlight falls on thrombin's structure
-
Stubbs, M. T.; Bode, W. A Player of Many Parts: The Spotlight Falls on Thrombin's Structure. Thromb. Res. 1993, 69, 1-58.
-
(1993)
Thromb. Res.
, vol.69
, pp. 1-58
-
-
Stubbs, M.T.1
Bode, W.2
-
4
-
-
0030013427
-
Molecular interactions of thrombin
-
Tulinsky, A. Molecular Interactions of Thrombin. Sem. Thromb. Hemostas. 1996, 22, 117-124
-
(1996)
Sem. Thromb. Hemostas.
, vol.22
, pp. 117-124
-
-
Tulinsky, A.1
-
5
-
-
0026530977
-
Natural protein proteinase inhibitors and their interaction with proteinases
-
Bode, W.; Huber, R. Natural Protein Proteinase Inhibitors and Their Interaction with Proteinases. Eur. J. Biochem. 1992, 204, 433-451.
-
(1992)
Eur. J. Biochem.
, vol.204
, pp. 433-451
-
-
Bode, W.1
Huber, R.2
-
6
-
-
0027410184
-
Active site and exosite binding of α-thrombin
-
Tulinsky, A.; Qiu, X. Active Site and Exosite Binding of α-Thrombin. Blood Coag. Fibrin. 1993, 4, 305-312.
-
(1993)
Blood Coag. Fibrin.
, vol.4
, pp. 305-312
-
-
Tulinsky, A.1
Qiu, X.2
-
7
-
-
0000784430
-
Nonpeptide mimetics of β-turns: A facile oxidation intramolecular cycloaddition of an azodicarbonyl system
-
Kahn, M.; Wilke, S.; Chen, B.; Fujita, K. Nonpeptide Mimetics of β-Turns: A Facile Oxidation Intramolecular Cycloaddition of an Azodicarbonyl System. J. Am. Chem. Soc. 1988, 110, 1638-1639.
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 1638-1639
-
-
Kahn, M.1
Wilke, S.2
Chen, B.3
Fujita, K.4
-
8
-
-
0026599016
-
Peptide mimetics of the thrombin-bound structure of fibrinopeptide A
-
Nakanishi, H.; Chrusciel, R. A.; Shen, R.; Bertenshaw, S.; Johnson, M. E.; Rydel, T. J.; Tulinsky, A.; Kahn, M. Peptide Mimetics of the Thrombin-Bound Structure of Fibrinopeptide A. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 1705-1709.
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 1705-1709
-
-
Nakanishi, H.1
Chrusciel, R.A.2
Shen, R.3
Bertenshaw, S.4
Johnson, M.E.5
Rydel, T.J.6
Tulinsky, A.7
Kahn, M.8
-
9
-
-
0027296565
-
The structure of a designed peptidomimetic inhibitor complex of α-thrombin
-
Wu, T.-P.; Yee, V.; Tulinsky, A.; Chrusciel, R. A.; Nakanishi, H.; Shen, R.; Priebe, C.; Kahn, M. The Structure of a Designed Peptidomimetic Inhibitor Complex of α-Thrombin. Protein Eng. 1993, 6, 471-478.
-
(1993)
Protein Eng.
, vol.6
, pp. 471-478
-
-
Wu, T.-P.1
Yee, V.2
Tulinsky, A.3
Chrusciel, R.A.4
Nakanishi, H.5
Shen, R.6
Priebe, C.7
Kahn, M.8
-
10
-
-
0345098217
-
Dipeptide mimetics for thrombin substrates and inhibitors
-
Orlando, FL, MEDI 125
-
Eguchi, M.; Boatman, P. D.; Ogbu, C. O.; Nakanishi, H.; Bolong, C.; Lee, M. S.; Kahn, M. Dipeptide Mimetics for Thrombin Substrates and Inhibitors. 212th American Chemical Society National Meeting, Orlando, FL, 1996; MEDI 125.
-
(1996)
212th American Chemical Society National Meeting
-
-
Eguchi, M.1
Boatman, P.D.2
Ogbu, C.O.3
Nakanishi, H.4
Bolong, C.5
Lee, M.S.6
Kahn, M.7
-
11
-
-
0030767555
-
Short synthesis of (3S,6S,9S)-2-Oxo-3-(N-Boc-amino)-1-azabicyclo[4.3.0]nonane-9-carboxylic acid methyl ester: Tandem cyclization protocol
-
Kim, H.-O.; Kahn, M. Short Synthesis of (3S,6S,9S)-2-Oxo-3-(N-Boc-amino)-1-azabicyclo[4.3.0]nonane-9-carboxylic Acid Methyl Ester: Tandem Cyclization Protocol. Tetrahedron Lett. 1997, 38, 6483-6484.
-
(1997)
Tetrahedron Lett.
, vol.38
, pp. 6483-6484
-
-
Kim, H.-O.1
Kahn, M.2
-
12
-
-
0344236010
-
Synthesis of dipeptide secondary structure mimetics
-
Kluwer Academic Publishers: Dordrecht, The Netherlands
-
th Am. Pept. Symposium; Kluwer Academic Publishers: Dordrecht, The Netherlands, 1998.
-
(1998)
th Am. Pept. Symposium
-
-
Eguchi, M.1
Kim, H.-O.2
Gardner, B.S.3
Boatman, P.D.4
Lee, M.S.5
Nakanishi, H.6
Kahn, M.7
-
13
-
-
0000064504
-
The assembly of blood clotting complexes on membranes
-
Mann, K. G. The Assembly of Blood Clotting Complexes on Membranes. Trends Biochem. Sci. 1987, 12, 229-233.
-
(1987)
Trends Biochem. Sci.
, vol.12
, pp. 229-233
-
-
Mann, K.G.1
-
14
-
-
0014221653
-
Structures of N-terminal fragments of fibrinogen and specificity of thrombin
-
Blomback, B.; Blomback, M.; Hessel, B.; Iwanaga, S. Structures of N-Terminal Fragments of Fibrinogen and Specificity of Thrombin. Nature 1967, 215, 1445-1448.
-
(1967)
Nature
, vol.215
, pp. 1445-1448
-
-
Blomback, B.1
Blomback, M.2
Hessel, B.3
Iwanaga, S.4
-
15
-
-
0026493575
-
Structure of the hirulog 3-thrombin complex and nature of the S1′ subsites of substrates and inhibitors
-
Qiu, X.; Padmanabhan, K. P.; Carperos, V. E.; Tulinsky, A.; Kline, T.; Maraganore, J. M.; Fenton, J. W. Structure of the Hirulog 3-Thrombin Complex and Nature of the S1′ Subsites of Substrates and Inhibitors. Biochemistry 1992, 31, 11689-11697.
-
(1992)
Biochemistry
, vol.31
, pp. 11689-11697
-
-
Qiu, X.1
Padmanabhan, K.P.2
Carperos, V.E.3
Tulinsky, A.4
Kline, T.5
Maraganore, J.M.6
Fenton, J.W.7
-
16
-
-
0027487088
-
Crystal structure of the complex of human α-thrombin and nonhydrolyzable bifunctional inhibitors, hirutonin-2 and hirutonin-6
-
Zdanov, A.; Wu, S.; DiMaio, J.; Konishi, Y.; Li, Y.; Wu, X.; Edwards, B. F. P.; Martin, P. D.; Cygler, M. Crystal Structure of the Complex of Human α-Thrombin and Nonhydrolyzable Bifunctional Inhibitors, Hirutonin-2 and Hirutonin-6. Proteins 1993, 17, 252-265.
-
(1993)
Proteins
, vol.17
, pp. 252-265
-
-
Zdanov, A.1
Wu, S.2
DiMaio, J.3
Konishi, Y.4
Li, Y.5
Wu, X.6
Edwards, B.F.P.7
Martin, P.D.8
Cygler, M.9
-
17
-
-
0029879577
-
Synthesis, structures, and structure-activity relationships of divalent thrombin inhibitors containing an α-ketoamide transition state mimetic
-
Krishnan, R. A.; Tulinsky, A.; Vlasuk, G. P.; Pearson, D.; Vallar, P.; Bergum, P.; Brunck, T. K.; Ripka, W. C. Synthesis, Structures, and Structure-Activity Relationships of Divalent Thrombin Inhibitors Containing an α-Ketoamide Transition State Mimetic. Protein Sci. 1996, 5, 422-433.
-
(1996)
Protein Sci.
, vol.5
, pp. 422-433
-
-
Krishnan, R.A.1
Tulinsky, A.2
Vlasuk, G.P.3
Pearson, D.4
Vallar, P.5
Bergum, P.6
Brunck, T.K.7
Ripka, W.C.8
-
18
-
-
0030064793
-
An ambiguous structure of a DNA 15-mer thrombin complex
-
Padmanabhan, K.; Tulinsky, A. An Ambiguous Structure of a DNA 15-mer Thrombin Complex. Acta Crystallogr. 1996, B52, 272-282.
-
(1996)
Acta Crystallogr.
, vol.B52
, pp. 272-282
-
-
Padmanabhan, K.1
Tulinsky, A.2
-
19
-
-
0032484901
-
Design of potent selective zinc-mediated serine protease inhibitors
-
Katz, B. A.; Clark, J. M.; Finer-Moore, J. S.; Jenkins, T. E.; Johnson, C. R.; Ross, M. J.; Luong, C.; Moore, W. R.; Stroud, R. M. Design of Potent Selective Zinc-Mediated Serine Protease Inhibitors. Nature 1998, 391, 608-612.
-
(1998)
Nature
, vol.391
, pp. 608-612
-
-
Katz, B.A.1
Clark, J.M.2
Finer-Moore, J.S.3
Jenkins, T.E.4
Johnson, C.R.5
Ross, M.J.6
Luong, C.7
Moore, W.R.8
Stroud, R.M.9
-
20
-
-
0026546559
-
Design, synthesis, and kinetic evaluation of a unique class of elastase inhibitors, the peptidyl α-ketobenzoxazoles, and the X-ray crystal structure of the covalent complex between porcine pancreatic elastase and Ac-Val-Pro-Val-2-Benzoxazole
-
Edwards, P. D.; Meyer, E. F., Jr.; Vijayalakshmi, J.; Tuthill, P. A.; Andisik, D. A.; Gomes, B.; Strimpler, A. Design, Synthesis, and Kinetic Evaluation of a Unique Class of Elastase Inhibitors, the Peptidyl α-Ketobenzoxazoles, and the X-ray Crystal Structure of the Covalent Complex Between Porcine Pancreatic Elastase and Ac-Val-Pro-Val-2-Benzoxazole. J. Am. Chem. Soc. 1992, 114, 1854-1863.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 1854-1863
-
-
Edwards, P.D.1
Meyer E.F., Jr.2
Vijayalakshmi, J.3
Tuthill, P.A.4
Andisik, D.A.5
Gomes, B.6
Strimpler, A.7
-
21
-
-
0029965611
-
Crystal structures of thrombin with thiazole-containing inhibitors: Probes of the S1′ binding site
-
Matthews, J. H.; Krishnan, R.; Costanzo, M. J.; Maryanoff, B. E.; Tulinsky, A. Crystal Structures of Thrombin with Thiazole-Containing Inhibitors: Probes of the S1′ Binding Site. Biophys. J. 1996, 71, 2830-2839.
-
(1996)
Biophys. J.
, vol.71
, pp. 2830-2839
-
-
Matthews, J.H.1
Krishnan, R.2
Costanzo, M.J.3
Maryanoff, B.E.4
Tulinsky, A.5
-
22
-
-
0002676730
-
Inhibitors of serine proteinases
-
Barrett, A. J., Salvesen, G., Eds.; Elsevier Science Publishers BV: The Netherlands
-
Powers, J, C.; Harper, J. W. Inhibitors of Serine Proteinases. In Proteinase Inhibitors; Barrett, A. J., Salvesen, G., Eds.; Elsevier Science Publishers BV: The Netherlands, 1986; pp 55-152.
-
(1986)
Proteinase Inhibitors
, pp. 55-152
-
-
Powers, J.C.1
Harper, J.W.2
-
23
-
-
0027296861
-
Molecular basis for the inhibition of human α-thrombin by the macrocyclic peptide cyclotheonamide A
-
Maryanoff, B. E.; Qiu, X.; Padmanabhan, K. P.; Tulinsky, A.; Almond, H. R., Jr.; Andrade-Gordon, P.; Greco, M. N.; Kauffman, J. A.; Nicolaou, K. C.; Liu, A.; Brungs, P. H.; Fusetani, N. Molecular Basis for the Inhibition of Human α-Thrombin by the Macrocyclic Peptide Cyclotheonamide A. Proc. Natl. Acad. Sci. U.S.A. 1893, 90, 8048-8052.
-
(1893)
Proc. Natl. Acad. Sci. U.S.A.
, vol.90
, pp. 8048-8052
-
-
Maryanoff, B.E.1
Qiu, X.2
Padmanabhan, K.P.3
Tulinsky, A.4
Almond H.R., Jr.5
Andrade-Gordon, P.6
Greco, M.N.7
Kauffman, J.A.8
Nicolaou, K.C.9
Liu, A.10
Brungs, P.H.11
Fusetani, N.12
-
24
-
-
0033594506
-
Secondary structure peptide mimetics: Design, synthesis, and evaluation of β-strand mimetic thrombin inhibitors
-
Details of design and synthesis appear in the preceding paper; see: Boatman, P. D.; et al. Secondary Structure Peptide Mimetics: Design, Synthesis, and Evaluation of β-Strand Mimetic Thrombin Inhibitors. J. Med. Chem. 1999, 42, 1367-1375.
-
(1999)
J. Med. Chem.
, vol.42
, pp. 1367-1375
-
-
Boatman, P.D.1
-
26
-
-
0026091628
-
Structure of the hirugen and hirulog 1 complexes of α-thrombin
-
Skrzypczk-Jankun, E.; Carperos, V. E.; Ravichandran, K. G.; Tulinsky, A.; Westbrook, M.; Maraganore, J. M. Structure of the Hirugen and Hirulog 1 Complexes of α-Thrombin. J. Mol. Biol. 1991, 221, 1379-1393.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 1379-1393
-
-
Skrzypczk-Jankun, E.1
Carperos, V.E.2
Ravichandran, K.G.3
Tulinsky, A.4
Westbrook, M.5
Maraganore, J.M.6
-
27
-
-
84967851020
-
The use of an imaging proportional counter in macromolecular crystallography
-
Howard, A. J.; Gilliland, G. L.; Finzel, B. C.; Poulos, T. L.; Ohlendorf, D. H.; Salemme, F. R. The Use of An Imaging Proportional Counter in Macromolecular Crystallography. J. Appl. Crystallogr. 1987, 20, 383-387.
-
(1987)
J. Appl. Crystallogr.
, vol.20
, pp. 383-387
-
-
Howard, A.J.1
Gilliland, G.L.2
Finzel, B.C.3
Poulos, T.L.4
Ohlendorf, D.H.5
Salemme, F.R.6
-
28
-
-
0001008852
-
Auto-indexing of oscillation images
-
Higashi, T. Auto-indexing of Oscillation Images. J. Appl. Crystallogr. 1990, 23, 253-257.
-
(1990)
J. Appl. Crystallogr.
, vol.23
, pp. 253-257
-
-
Higashi, T.1
-
29
-
-
0028586082
-
The isomorphous structures of prethrombin 2, hirugen, and PPACK-thrombin: Changes accompanying activation and exosite binding to thrombin
-
Vijayalakshmi, J.; Padmanabhan, K. P.; Mann, K. G.; Tulinsky, A. The Isomorphous Structures of Prethrombin 2, Hirugen, and PPACK-Thrombin: Changes Accompanying Activation and Exosite Binding to Thrombin. Protein Sci. 1994, 3, 2254-2271.
-
(1994)
Protein Sci.
, vol.3
, pp. 2254-2271
-
-
Vijayalakshmi, J.1
Padmanabhan, K.P.2
Mann, K.G.3
Tulinsky, A.4
-
30
-
-
0022333121
-
Stereochemically restrained refinement of macromolecular structure
-
Hendrickson, W. A. Stereochemically Restrained Refinement of Macromolecular Structure. Methods Enzymol. 1985, 115, 252-270.
-
(1985)
Methods Enzymol.
, vol.115
, pp. 252-270
-
-
Hendrickson, W.A.1
-
31
-
-
0029090336
-
+ binding site of thrombin
-
+ Binding Site of Thrombin. J. Biol. Chem. 1995, 270, 22089-22092.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 22089-22092
-
-
Dicera, E.1
Guinto, E.R.2
Vindigni, A.3
Dang, Q.D.4
Ayala, Y.M.5
Meng, W.6
Tulinsky, A.7
-
33
-
-
0027050807
-
The refined 1.9-å x-ray crystal structure of D-Phe-Pro-Arg-Chloromethyl ketone-inhibited human α-thrombin: Structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships
-
Bode, W.; Turk, D.; Karshikov, A. The Refined 1.9-Å X-ray Crystal Structure of D-Phe-Pro-Arg-Chloromethyl Ketone-Inhibited Human α-Thrombin: Structure Analysis, Overall Structure, Electrostatic Properties, Detailed Active-Site Geometry, and Structure-Function Relationships. Protein Sci. 1992, 1, 426-471.
-
(1992)
Protein Sci.
, vol.1
, pp. 426-471
-
-
Bode, W.1
Turk, D.2
Karshikov, A.3
-
35
-
-
0028209977
-
Crystallographic structures of thrombin complexed with thrombin receptor peptides: Existence of expected and novel binding modes
-
Mathews, I. I.; Padmanabhan, K. P.; Ganesh, V.; Tulinsky, A.; Ishii, M.; Chen, J.; Turck, C. W.; Coughlin, S. R.; Fenton, J. W., II. Crystallographic Structures of Thrombin Complexed with Thrombin Receptor Peptides: Existence of Expected and Novel Binding Modes. Biochemistry 1994, 33, 3266-3279.
-
(1994)
Biochemistry
, vol.33
, pp. 3266-3279
-
-
Mathews, I.I.1
Padmanabhan, K.P.2
Ganesh, V.3
Tulinsky, A.4
Ishii, M.5
Chen, J.6
Turck, C.W.7
Coughlin, S.R.8
Fenton J.W. II9
-
36
-
-
0028930160
-
Kinetic and crytallographic studies of thrombin with Ac-(D)Phe-Pro-Boro-Arg-OH and its lysine, amidine, homolysine, and ornithine analogues
-
Weber, P. C.; Lee, S. L.; Lewandowski, F. A.; Schadt, M. C.; Chang, C. H.; Kettner, C. A. Kinetic and Crytallographic Studies of Thrombin with Ac-(D)Phe-Pro-Boro-Arg-OH and Its Lysine, Amidine, Homolysine, and Ornithine Analogues. Biochemistry 1995, 34, 3750-3757.
-
(1995)
Biochemistry
, vol.34
, pp. 3750-3757
-
-
Weber, P.C.1
Lee, S.L.2
Lewandowski, F.A.3
Schadt, M.C.4
Chang, C.H.5
Kettner, C.A.6
-
37
-
-
0029985841
-
Comparison of the structures of the cyclotheonamide A complexes of human α-thrombin and bovine β-trypsin
-
Ganesh, V.; Lee, A. Y.; Clardy, J.; Tulinsky, A. Comparison of the Structures of the Cyclotheonamide A Complexes of Human α-Thrombin and Bovine β-Trypsin. Protein Sci. 1996, 5, 825-835.
-
(1996)
Protein Sci.
, vol.5
, pp. 825-835
-
-
Ganesh, V.1
Lee, A.Y.2
Clardy, J.3
Tulinsky, A.4
-
38
-
-
0029099770
-
Crystallographic structures of a peptidyl keto acid inhibitor and human α-thrombin
-
Hakansson, K.; Tulinsky, A.; Abelman, M. M.; Miller, T. A.; Vlasuk, G. P.; Bergum, P. W.; Lim-Wilby, M. S. L.; Brunck, T. K. Crystallographic Structures of a Peptidyl Keto Acid Inhibitor and Human α-Thrombin. Bioorg. Med. Chem. 1995, 3, 1009-1017.
-
(1995)
Bioorg. Med. Chem.
, vol.3
, pp. 1009-1017
-
-
Hakansson, K.1
Tulinsky, A.2
Abelman, M.M.3
Miller, T.A.4
Vlasuk, G.P.5
Bergum, P.W.6
Lim-Wilby, M.S.L.7
Brunck, T.K.8
-
39
-
-
0031024174
-
Synthesis, evaluation and crystallographic analysis of l-371,912
-
Lyle, T. A.; Chen, Z.; Appleby, S. D.; Freidinger, R. M.; Gardell, S. J.; Lewis, S. D.; Li, Y.; Lyle, E. A.; Lynch, J. J.; Mulichak, A. M.; Ng, A. S.; Naylor-Olsen, A. M.; Sanders, W. M. Synthesis, Evaluation and Crystallographic Analysis of L-371,912. Bioorg. Med. Chem. Lett. 1997, 7, 67-72.
-
(1997)
Bioorg. Med. Chem. Lett.
, vol.7
, pp. 67-72
-
-
Lyle, T.A.1
Chen, Z.2
Appleby, S.D.3
Freidinger, R.M.4
Gardell, S.J.5
Lewis, S.D.6
Li, Y.7
Lyle, E.A.8
Lynch, J.J.9
Mulichak, A.M.10
Ng, A.S.11
Naylor-Olsen, A.M.12
Sanders, W.M.13
-
40
-
-
0020806688
-
The x-ray crystal structure analysis of the refined complex formed by bovine trypsin and ρ-amidinophenylpyruvate at 1.4 å resolution
-
Walter, J.; Bode, W. The X-ray Crystal Structure Analysis of the Refined Complex Formed by Bovine Trypsin and ρ-Amidinophenylpyruvate at 1.4 Å Resolution. Z. Physiol. Chem. 1983, 364, 949-959.
-
(1983)
Z. Physiol. Chem.
, vol.364
, pp. 949-959
-
-
Walter, J.1
Bode, W.2
-
41
-
-
0029088844
-
Crystal structure of human α-thrombin complexed with hirugen and ρ-amidinophenylpyruvate at 1.6 Å resolution
-
Chen, Z.; Li, Y.; Mulichak, A. M.; Lewis, S. D.; Shafer, J. A. Crystal Structure of Human α-Thrombin Complexed with Hirugen and ρ-Amidinophenylpyruvate at 1.6 Å Resolution. Arch. Biochem. Biophys. 1995, 322, 198-203.
-
(1995)
Arch. Biochem. Biophys.
, vol.322
, pp. 198-203
-
-
Chen, Z.1
Li, Y.2
Mulichak, A.M.3
Lewis, S.D.4
Shafer, J.A.5
|