-
1
-
-
0028024928
-
Specific nucleus as the transition state for protein folding. Evidence from the lattice model
-
Abkevich V. I., Gutin A. M., Shakhnovich E. I. Specific nucleus as the transition state for protein folding. Evidence from the lattice model. Biochemistry. 33:1994;10026-10036.
-
(1994)
Biochemistry
, vol.33
, pp. 10026-10036
-
-
Abkevich, V.I.1
Gutin, A.M.2
Shakhnovich, E.I.3
-
2
-
-
0030342453
-
Improved design of stable and fast-folding model proteins
-
Abkevich V. I., Gutin A. M., Shakhnovich E. I. Improved design of stable and fast-folding model proteins. Fold. Des. 1:1996;221-230.
-
(1996)
Fold. Des.
, vol.1
, pp. 221-230
-
-
Abkevich, V.I.1
Gutin, A.M.2
Shakhnovich, E.I.3
-
3
-
-
0028802181
-
Initial hydrophobic collapse in the folding of barstar
-
Agashe V. R., Shastry M. C. R., Udgaonkar J. B. Initial hydrophobic collapse in the folding of barstar. Nature. 377:1995;754-757.
-
(1995)
Nature
, vol.377
, pp. 754-757
-
-
Agashe, V.R.1
Shastry, M.C.R.2
Udgaonkar, J.B.3
-
4
-
-
36849126204
-
Studies in molecular dynamics I. General method
-
Alder B. J., Wainwright T. E. Studies in molecular dynamics I. General method. J. Chem. Phys. 31:1959;459-466.
-
(1959)
J. Chem. Phys.
, vol.31
, pp. 459-466
-
-
Alder, B.J.1
Wainwright, T.E.2
-
6
-
-
36749107785
-
Molecular dynamics simulations at constant pressure and/or constant temperature
-
Andersen H. C. Molecular dynamics simulations at constant pressure and/or constant temperature. J. Chem. Phys. 72:1980;2384-2393.
-
(1980)
J. Chem. Phys.
, vol.72
, pp. 2384-2393
-
-
Andersen, H.C.1
-
7
-
-
0016828929
-
Dynamics of ligand binding to myoglobin
-
Austin R. H., Beeson K. W., Eisenstein L., Frauenfelder H., Gunsalus I. C. Dynamics of ligand binding to myoglobin. Biochemistry. 14:1975;5355-5373.
-
(1975)
Biochemistry
, vol.14
, pp. 5355-5373
-
-
Austin, R.H.1
Beeson, K.W.2
Eisenstein, L.3
Frauenfelder, H.4
Gunsalus, I.C.5
-
8
-
-
0030755502
-
Absence of a stable intermediate on the folding pathway of protein A
-
Bai Y. W., Karimi A., Dyson H. J., Wright P. E. Absence of a stable intermediate on the folding pathway of protein A. Protein Sci. 6:1997;1449-1457.
-
(1997)
Protein Sci.
, vol.6
, pp. 1449-1457
-
-
Bai, Y.W.1
Karimi, A.2
Dyson, H.J.3
Wright, P.E.4
-
9
-
-
0029249945
-
The nature of protein folding pathways - The classical versus the new view
-
Baldwin R. L. The nature of protein folding pathways - the classical versus the new view. J. Biomol. NMR. 5:1995;103-109.
-
(1995)
J. Biomol. NMR
, vol.5
, pp. 103-109
-
-
Baldwin, R.L.1
-
10
-
-
0029973119
-
Direct observation of fast protein folding: The initial collapse of apomyoglobin
-
Ballew R. M., Sabelko J., Gruebele M. Direct observation of fast protein folding: the initial collapse of apomyoglobin. Proc. Natl Acad. Sci. USA. 93:1996;5759-5764.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 5759-5764
-
-
Ballew, R.M.1
Sabelko, J.2
Gruebele, M.3
-
11
-
-
84946639640
-
Molecular dynamics of rigid and non-rigid necklaces of hard discs
-
Bellemans A., Orban J., Belle D. V. Molecular dynamics of rigid and non-rigid necklaces of hard discs. Mol. Phys. 39:1980;781-782.
-
(1980)
Mol. Phys.
, vol.39
, pp. 781-782
-
-
Bellemans, A.1
Orban, J.2
Belle, D.V.3
-
12
-
-
0000019441
-
Langevin model of protein folding: Cooperativity and stability
-
Berriz G. F., Gutin A. M., Shakhnovich E. I. Langevin model of protein folding: cooperativity and stability. J. Chem. Phys. 106:1997;9276-9285.
-
(1997)
J. Chem. Phys.
, vol.106
, pp. 9276-9285
-
-
Berriz, G.F.1
Gutin, A.M.2
Shakhnovich, E.I.3
-
14
-
-
0032499770
-
Isolation of a myoglobin molten globule by selective cobalt (III) - induced unfolding
-
Blum O., Haick A., Cwikel D., Dori Z., Meade T. J., Gray H. B. R. S. Isolation of a myoglobin molten globule by selective cobalt (III) - induced unfolding. Proc. Natl Acad. Sci. USA. 95:1998;6659-6662.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 6659-6662
-
-
Blum, O.1
Haick, A.2
Cwikel, D.3
Dori, Z.4
Meade, T.J.5
Gray, H.B.R.S.6
-
15
-
-
0029151245
-
First principles calculation of the folding free energy of a three-helix bundle protein
-
Boczko E. M., Brooks C. L. III. First principles calculation of the folding free energy of a three-helix bundle protein. Science. 269:1995;393-396.
-
(1995)
Science
, vol.269
, pp. 393-396
-
-
Boczko, E.M.1
Brooks C.L. III2
-
16
-
-
0028608099
-
The stability and unfolding of an IgG binding protein based upon the B domain of protein A from Staphylococcus aureus probed by tryptophan substitution and fluorescence spectroscopy
-
Bottomley S. P., Popplewell A. G., Scawan M., Wan T., Sutton B. J., Gore M. G. The stability and unfolding of an IgG binding protein based upon the B domain of protein A from Staphylococcus aureus probed by tryptophan substitution and fluorescence spectroscopy. Protein Eng. 7:1994;1463-1470.
-
(1994)
Protein Eng.
, vol.7
, pp. 1463-1470
-
-
Bottomley, S.P.1
Popplewell, A.G.2
Scawan, M.3
Wan, T.4
Sutton, B.J.5
Gore, M.G.6
-
18
-
-
0024733407
-
Intermediates and barrier crossing in a random energy model (with applications to protein folding)
-
Bryngelson J. D., Wolynes P. G. Intermediates and barrier crossing in a random energy model (with applications to protein folding). J. Phys. Chem. 93:1989;6902-6915.
-
(1989)
J. Phys. Chem.
, vol.93
, pp. 6902-6915
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
19
-
-
0031746429
-
From coiled coils to small globular proteins - design of a native-like three-helix bundle
-
Bryson J. W., Desjarlais J. R., Handel T. M., Degrado W. F. From coiled coils to small globular proteins - design of a native-like three-helix bundle. Protein Sci. 7:1998;1404-1414.
-
(1998)
Protein Sci.
, vol.7
, pp. 1404-1414
-
-
Bryson, J.W.1
Desjarlais, J.R.2
Handel, T.M.3
Degrado, W.F.4
-
20
-
-
0032554626
-
Protein folding dynamics. Quantitative comparison between theory and experiment
-
Burton R. E., Myers J. K., Oas T. G. Protein folding dynamics. Quantitative comparison between theory and experiment. Biochemistry. 37:1998;5337-5343.
-
(1998)
Biochemistry
, vol.37
, pp. 5337-5343
-
-
Burton, R.E.1
Myers, J.K.2
Oas, T.G.3
-
21
-
-
0026793589
-
Kinetic resolution of peptide bond and side-chain far-UV circular dichroism during the folding of hen egg-white lysozyme
-
Chaffotte A. F., Guillou Y., Goldberg M. E. Kinetic resolution of peptide bond and side-chain far-UV circular dichroism during the folding of hen egg-white lysozyme. Biochemistry. 31:1992;9694-9702.
-
(1992)
Biochemistry
, vol.31
, pp. 9694-9702
-
-
Chaffotte, A.F.1
Guillou, Y.2
Goldberg, M.E.3
-
22
-
-
0025150383
-
The origins of structure in globular proteins
-
Chan H. S., Dill K. A. The origins of structure in globular proteins. Proc. Natl Acad. Sci. USA. 83:1990;6388-6392.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 6388-6392
-
-
Chan, H.S.1
Dill, K.A.2
-
24
-
-
0003166498
-
Protein folding in the landscape perspective - chevron plots and non-Arrhenius kinetics
-
Chan Y., Dill K. A. Protein folding in the landscape perspective - chevron plots and non-Arrhenius kinetics. Proteins: Struct. Funct. Genet. 30:1998;1-33.
-
(1998)
Proteins: Struct. Funct. Genet.
, vol.30
, pp. 1-33
-
-
Chan, Y.1
Dill, K.A.2
-
26
-
-
1842298212
-
From Levinthal to pathways to funnels
-
Dill K. A., Chan H. S. From Levinthal to pathways to funnels. Nature Struct. Biol. 4:1997;10-19.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 10-19
-
-
Dill, K.A.1
Chan, H.S.2
-
27
-
-
0028929556
-
Principles of protein folding - A perspective from simple exact models
-
Dill K. A., Bromberg S., Yue K., Fiebig K. M., Yee D. P., Thomas P. D., Chan H. S. Principles of protein folding - a perspective from simple exact models. Protein Sci. 4:1995;561-602.
-
(1995)
Protein Sci.
, vol.4
, pp. 561-602
-
-
Dill, K.A.1
Bromberg, S.2
Yue, K.3
Fiebig, K.M.4
Yee, D.P.5
Thomas, P.D.6
Chan, H.S.7
-
28
-
-
0345409221
-
The thermodynamics and kinetics of protein folding. A lattice model analysis of multiple pathways with intermediates
-
Dinner A. R., Karplus M. The thermodynamics and kinetics of protein folding. A lattice model analysis of multiple pathways with intermediates. J. Mol. Biol. 1999.
-
(1999)
J. Mol. Biol
-
-
Dinner, A.R.1
Karplus, M.2
-
29
-
-
0029781355
-
The folding mechanism of larger model proteins: Role of native structure
-
Dinner A. R., Šali A., Karplus M. The folding mechanism of larger model proteins: role of native structure. Proc. Natl Acad. Sci. USA. 93:1996;8356-8361.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 8356-8361
-
-
Dinner, A.R.1
Šali, A.2
Karplus, M.3
-
31
-
-
0344301982
-
Protein folding: A perspective from theory and experiment
-
Dobson C. M., Šali A., Karplus M. Protein folding: a perspective from theory and experiment. Angew Chem. Int. Ed. 37:1998;868-893.
-
(1998)
Angew Chem. Int. Ed.
, vol.37
, pp. 868-893
-
-
Dobson, C.M.1
Šali, A.2
Karplus, M.3
-
33
-
-
0001563395
-
On the transition coordinate for the protein folding
-
Du R., Pande V. S., Grosberg A. Y., Tanaka T., Shakhnovich E. S. On the transition coordinate for the protein folding. J. Chem. Phys. 108:1998;334-350.
-
(1998)
J. Chem. Phys.
, vol.108
, pp. 334-350
-
-
Du, R.1
Pande, V.S.2
Grosberg, A.Y.3
Tanaka, T.4
Shakhnovich, E.S.5
-
34
-
-
0032561237
-
Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution
-
Duan Y., Kollman P. A. Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution. Science. 282:1998;740-744.
-
(1998)
Science
, vol.282
, pp. 740-744
-
-
Duan, Y.1
Kollman, P.A.2
-
35
-
-
0000810764
-
Infrared studies of fast events in protein folding
-
Dyer R. B., Gai F., Woodruff W. H., Gilmanshin R., Cakllender R. H. Infrared studies of fast events in protein folding. Acc. Chem. Res. 31:1998;709-716.
-
(1998)
Acc. Chem. Res.
, vol.31
, pp. 709-716
-
-
Dyer, R.B.1
Gai, F.2
Woodruff, W.H.3
Gilmanshin, R.4
Cakllender, R.H.5
-
36
-
-
0023140044
-
Multiple conformational states of proteins: A molecular dynamics analysis of myoglobin
-
Elber R., Karplus M. Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin. Science. 235:1987;318-321.
-
(1987)
Science
, vol.235
, pp. 318-321
-
-
Elber, R.1
Karplus, M.2
-
37
-
-
0028352044
-
Kinetic mechanism of cytochrome c folding: Involvement of the heme and its ligands
-
Elöve G. A., Bhuyan A. K., Roder H. Kinetic mechanism of cytochrome c folding: involvement of the heme and its ligands. Biochemistry. 33:1994;5925-6935.
-
(1994)
Biochemistry
, vol.33
, pp. 5925-6935
-
-
Elöve, G.A.1
Bhuyan, A.K.2
Roder, H.3
-
38
-
-
0000108661
-
Fast and slow folding in cytochrome c
-
Englander S. W., Sosnick T. R., Mayne L. C., Shtilerman M., Qi P. X., Bai Y. Fast and slow folding in cytochrome c. Acc. Chem. Res. 31:1998;737-744.
-
(1998)
Acc. Chem. Res.
, vol.31
, pp. 737-744
-
-
Englander, S.W.1
Sosnick, T.R.2
Mayne, L.C.3
Shtilerman, M.4
Qi, P.X.5
Bai, Y.6
-
39
-
-
0011875725
-
Equilibrium electrostatic effects on behavior of polyions in solution: Polyion-mobile ion interaction
-
Ermak D. L., Yeh Y. Equilibrium electrostatic effects on behavior of polyions in solution: polyion-mobile ion interaction. Chem. Phys. Letters. 24:1974;243-248.
-
(1974)
Chem. Phys. Letters
, vol.24
, pp. 243-248
-
-
Ermak, D.L.1
Yeh, Y.2
-
40
-
-
0027491027
-
Thermal motions and functions of bacteriorhodopsin in purple membranes: Effects of temperature and hydration studied by neutron scattering
-
Ferrand M., Dianoux A. J., Petry W., Zaccai G. Thermal motions and functions of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering. Proc. Natl Acad. Sci. USA. 90:1993;9668-9672.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 9668-9672
-
-
Ferrand, M.1
Dianoux, A.J.2
Petry, W.3
Zaccai, G.4
-
42
-
-
0031043161
-
Nucleation mechanisms in protein folding
-
Fersht A. R. Nucleation mechanisms in protein folding. Curr. Opin. Struct. Biol. 7:1997;3-9.
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 3-9
-
-
Fersht, A.R.1
-
43
-
-
0029157429
-
Compact intermediate states in protein folding
-
Fink A. L. Compact intermediate states in protein folding. Annu. Rev. Biophys. Biomol. Struct. 24:1995;495-522.
-
(1995)
Annu. Rev. Biophys. Biomol. Struct.
, vol.24
, pp. 495-522
-
-
Fink, A.L.1
-
44
-
-
0031933289
-
Discrete intermediate versus molten globule models for protein folding - 'characterization' of partially folded intermediates of apomyoglobin
-
Fink A. L., Oberg K. A., Seshadri S. Discrete intermediate versus molten globule models for protein folding - 'characterization' of partially folded intermediates of apomyoglobin. Fold. Des. 3:1998;19-25.
-
(1998)
Fold. Des.
, vol.3
, pp. 19-25
-
-
Fink, A.L.1
Oberg, K.A.2
Seshadri, S.3
-
46
-
-
0032574827
-
Dynamics and function of proteins: The search for general concepts
-
Frauenfelder H., McMahon B. Dynamics and function of proteins: the search for general concepts. Proc. Natl Acad. Sci. USA. 95:1998;4795-4797.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 4795-4797
-
-
Frauenfelder, H.1
McMahon, B.2
-
48
-
-
0026801084
-
Three-dimensional solution structure of the B domain of staphylococcal protein A: Comparisons of the solution and crystal structures
-
Gouda H., Torigoe H., Saito A., Sato M., Arata Y., Shimada I. Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures. Biochemistry. 31:1992;9665.
-
(1992)
Biochemistry
, vol.31
, pp. 9665
-
-
Gouda, H.1
Torigoe, H.2
Saito, A.3
Sato, M.4
Arata, Y.5
Shimada, I.6
-
50
-
-
0002689652
-
Thermodynamics of protein folding - A statistical mechanical study of a small all-beta protein
-
Guo Z. Y., Brooks C. L. III. Thermodynamics of protein folding - a statistical mechanical study of a small all-beta protein. Biopolymers. 42:1997;745-757.
-
(1997)
Biopolymers
, vol.42
, pp. 745-757
-
-
Guo, Z.Y.1
Brooks C.L. III2
-
51
-
-
0029010695
-
Kinetics of protein folding: Nucleation mechanism, time scales, and pathways
-
Guo Z., Thirumalai D. Kinetics of protein folding: nucleation mechanism, time scales, and pathways. Biopolymers. 36:1995;83-102.
-
(1995)
Biopolymers
, vol.36
, pp. 83-102
-
-
Guo, Z.1
Thirumalai, D.2
-
52
-
-
0030601851
-
Kinetics and thermodynamics of folding of a de novo designed four-helix bundle protein
-
Guo Z., Thirumalai D. Kinetics and thermodynamics of folding of a de novo designed four-helix bundle protein. J. Mol. Biol. 263:1996;323-343.
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 323-343
-
-
Guo, Z.1
Thirumalai, D.2
-
53
-
-
0031303354
-
The nucleation-collapse mechanism in protein folding: Evidence for the non-uniqueness of the folding nucleus
-
Guo Z., Thirmulai D. The nucleation-collapse mechanism in protein folding: evidence for the non-uniqueness of the folding nucleus. J. Mol. Biol. 2:1997;377-391.
-
(1997)
J. Mol. Biol.
, vol.2
, pp. 377-391
-
-
Guo, Z.1
Thirmulai, D.2
-
54
-
-
0030967896
-
Exploring the folding free energy surface of a three-helix bundle protein
-
Guo Z. Y., Brooks C. L. III, Boczko E. M. Exploring the folding free energy surface of a three-helix bundle protein. Proc. Natl Acad. Sci. USA. 94:1997;10161-10166.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 10161-10166
-
-
Guo, Z.Y.1
Brooks C.L. III2
Boczko, E.M.3
-
55
-
-
0028944346
-
Is burst hydrophobic collapse necessary for protein folding
-
Gutin A. M., Abkevich V. I., Shakhnovich E. I. Is burst hydrophobic collapse necessary for protein folding. Biochemistry. 34:1995;3066-2076.
-
(1995)
Biochemistry
, vol.34
, pp. 3066-2076
-
-
Gutin, A.M.1
Abkevich, V.I.2
Shakhnovich, E.I.3
-
56
-
-
0029964867
-
Diffusion-limited contact formation in unfolded cytochrome c: Estimating the maximum rate of protein folding
-
Hagen S. J., Hofrichter J., Szabo A., Eaton W. A. Diffusion-limited contact formation in unfolded cytochrome c: estimating the maximum rate of protein folding. Proc. Natl Acad. Sci. USA. 93:1996;11615-11617.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 11615-11617
-
-
Hagen, S.J.1
Hofrichter, J.2
Szabo, A.3
Eaton, W.A.4
-
57
-
-
0032502803
-
Molecular mechanisms for cooperative folding of proteins
-
Hao M. H., Scheraga H. A. Molecular mechanisms for cooperative folding of proteins. J. Mol. Biol. 277:1998;973-983.
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 973-983
-
-
Hao, M.H.1
Scheraga, H.A.2
-
58
-
-
0001043435
-
Square-well and square-shoulder fluids: Simulation and equations of state
-
Heyes D. M., Aston P. J. Square-well and square-shoulder fluids: simulation and equations of state. J. Chem. Phys. 97:1992;5738-5748.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 5738-5748
-
-
Heyes, D.M.1
Aston, P.J.2
-
59
-
-
0026643094
-
The nature of folded states of globular proteins
-
Honeycutt J. D., Thirumalai D. The nature of folded states of globular proteins. Biopolymers. 32:1992;695-709.
-
(1992)
Biopolymers
, vol.32
, pp. 695-709
-
-
Honeycutt, J.D.1
Thirumalai, D.2
-
60
-
-
0001842441
-
Adding backbone to protein folding why proteins are polypeptides
-
Honig B., Cohen F. E. Adding backbone to protein folding why proteins are polypeptides. Fold. Des. 1:1997;R17-R20.
-
(1997)
Fold. Des.
, vol.1
-
-
Honig, B.1
Cohen, F.E.2
-
61
-
-
0001538909
-
Nonequilibrium molecular dynamics
-
Hoover W. G. Nonequilibrium molecular dynamics. Phys. Rev. ser. A. 31:1985;1695.
-
(1985)
Phys. Rev. Ser. a
, vol.31
, pp. 1695
-
-
Hoover, W.G.1
-
62
-
-
0027992140
-
The origins of protein secondary structure. Effects of packing density and hydrogen bonding studied by a fast conformational search
-
Hunt N. G., Gregoret L. M., Cohen F. E. The origins of protein secondary structure. Effects of packing density and hydrogen bonding studied by a fast conformational search. J. Mol. Biol. 241:1994;214-225.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 214-225
-
-
Hunt, N.G.1
Gregoret, L.M.2
Cohen, F.E.3
-
63
-
-
0028868995
-
The structure of the transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods. Evidence for a nucleation-condensation mechanism for protein folding
-
Itzhaki L. S., Otzen D. E., Fersht A. R. The structure of the transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods. Evidence for a nucleation-condensation mechanism for protein folding. J. Mol. Biol. 254:1995;260-288.
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 260-288
-
-
Itzhaki, L.S.1
Otzen, D.E.2
Fersht, A.R.3
-
64
-
-
0026345750
-
Folding of chymotrypsin inhibitor 2. I. Evidence for a two-state transition
-
Jackson S. E., Fersht A. R. Folding of chymotrypsin inhibitor 2. I. Evidence for a two-state transition. Biochemistry. 30:1991;10428-10435.
-
(1991)
Biochemistry
, vol.30
, pp. 10428-10435
-
-
Jackson, S.E.1
Fersht, A.R.2
-
65
-
-
0030626588
-
The Levinthal paradox: Yesterday and today
-
Karplus M. The Levinthal paradox: yesterday and today. Fold. Des. 2:1997;S68-S75.
-
(1997)
Fold. Des.
, vol.2
-
-
Karplus, M.1
-
67
-
-
0028949547
-
Theoretical studies of protein folding and unfolding
-
Karplus M., Šali A. Theoretical studies of protein folding and unfolding. Curr. Opin. Struct. Biol. 5:1995;58-73.
-
(1995)
Curr. Opin. Struct. Biol.
, vol.5
, pp. 58-73
-
-
Karplus, M.1
Šali, A.2
-
68
-
-
84985656311
-
Diffusion-collision model for protein folding
-
Karplus M., Weaver D. L. Diffusion-collision model for protein folding. Biopolymers. 18:1979;1421-1437.
-
(1979)
Biopolymers
, vol.18
, pp. 1421-1437
-
-
Karplus, M.1
Weaver, D.L.2
-
69
-
-
0028327236
-
Protein folding dynamics - The diffusion-collision model and experimental data
-
Karplus M., Weaver D. L. Protein folding dynamics - the diffusion-collision model and experimental data. Protein Sci. 3:1994;650-668.
-
(1994)
Protein Sci.
, vol.3
, pp. 650-668
-
-
Karplus, M.1
Weaver, D.L.2
-
70
-
-
0029025915
-
Kinetic traps in lysozyme folding
-
Kiefhaber T. Kinetic traps in lysozyme folding. Proc. Natl Acad. Sci. USA. 92:1995;9029-9033.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 9029-9033
-
-
Kiefhaber, T.1
-
71
-
-
0025345415
-
Intermediates in the folding reactions of small proteins
-
Kim P. S., Baldwin R. L. Intermediates in the folding reactions of small proteins. Annu. Rev. Biochem. 59:1990;631-660.
-
(1990)
Annu. Rev. Biochem.
, vol.59
, pp. 631-660
-
-
Kim, P.S.1
Baldwin, R.L.2
-
72
-
-
0032374086
-
Energy landscape of a native protein. Jumping-among-minima model
-
Kitao A., Hayward S., Go N. Energy landscape of a native protein. Jumping-among-minima model. Proteins: Struct. Funct. Genet. 33:1998;496-577.
-
(1998)
Proteins: Struct. Funct. Genet.
, vol.33
, pp. 496-577
-
-
Kitao, A.1
Hayward, S.2
Go, N.3
-
73
-
-
0029809182
-
On the origin of the cooperativity of protein folding: Implication from model simulations
-
Kolinski A., Galazka W., Skolnick J. On the origin of the cooperativity of protein folding: Implication from model simulations. Proteins: Struct. Funct. Genet. 26:1996;271-287.
-
(1996)
Proteins: Struct. Funct. Genet.
, vol.26
, pp. 271-287
-
-
Kolinski, A.1
Galazka, W.2
Skolnick, J.3
-
74
-
-
0000542656
-
Monte Carlo studies of the thermodynamics and kinetics of reduced protein models application to small helical, beta, and alpha/beta proteins
-
Kolinski A., Galazka W., Skolnick J. Monte Carlo studies of the thermodynamics and kinetics of reduced protein models application to small helical, beta, and alpha/beta proteins. J. Chem. Phys. 108:1998;2608-2617.
-
(1998)
J. Chem. Phys.
, vol.108
, pp. 2608-2617
-
-
Kolinski, A.1
Galazka, W.2
Skolnick, J.3
-
75
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis P. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Applied Crystallog. 24:1991;946-950.
-
(1991)
J. Applied Crystallog.
, vol.24
, pp. 946-950
-
-
Kraulis, P.1
-
76
-
-
0031311964
-
Molten globule as an intermediate on the human prostatic phosphatase folding pathway
-
Kuciel R., Mazurkiewicz A. Molten globule as an intermediate on the human prostatic phosphatase folding pathway. Acta Biochim. Polonica. 44:1997;645-657.
-
(1997)
Acta Biochim. Polonica
, vol.44
, pp. 645-657
-
-
Kuciel, R.1
Mazurkiewicz, A.2
-
77
-
-
0031465967
-
Multiple unfolding simulations reconcile the "new view" of protein folding with the old
-
Lazaridis T., Karplus M. Multiple unfolding simulations reconcile the "new view" of protein folding with the old. Science. 278:1997;1928-1931.
-
(1997)
Science
, vol.278
, pp. 1928-1931
-
-
Lazaridis, T.1
Karplus, M.2
-
78
-
-
0002006297
-
Are three pathways for protein folding?
-
Levinthal C. Are three pathways for protein folding? J. Chim. Phys. 65:1968;44-45.
-
(1968)
J. Chim. Phys.
, vol.65
, pp. 44-45
-
-
Levinthal, C.1
-
79
-
-
0001861319
-
How to fold graciously
-
P. Debrunner, J. C. M. Tsibris, & E. Münck. Urbana: University of Illinois Press
-
Levinthal C. How to fold graciously. Debrunner P., Tsibris J. C. M., Münck E. Mossbauer Spectroscopy in Biological Systems, Proceedings of a Meeting held at Allerton House, Monticello, Illinois. 1969;University of Illinois Press, Urbana.
-
(1969)
Mossbauer Spectroscopy in Biological Systems, Proceedings of a Meeting Held at Allerton House, Monticello, Illinois
-
-
Levinthal, C.1
-
80
-
-
0000936038
-
The calculation of molecular vibration frequencies
-
Lindemann F. A. The calculation of molecular vibration frequencies. Physik, Z. 11:1910;609-612.
-
(1910)
Physik, Z.
, vol.11
, pp. 609-612
-
-
Lindemann, F.A.1
-
81
-
-
0028406756
-
Discontinuous molecular dynamics simulation of hydrogen-bonding systems
-
Liu J., Bowman T. L. II, Elliott J. R. Jr. Discontinuous molecular dynamics simulation of hydrogen-bonding systems. Ind. Eng. Chem. Res. 33:1994;957-964.
-
(1994)
Ind. Eng. Chem. Res.
, vol.33
, pp. 957-964
-
-
Liu, J.1
Bowman T.L. II2
Elliott J.R., Jr.3
-
82
-
-
0032584210
-
The crystal structure of a 3D domain-swapped dimer of RNase A at a 2.1-Å resolution
-
Liu Y., Hart P. J., Schlunegger M. P., Eisenberg D. The crystal structure of a 3D domain-swapped dimer of RNase A at a 2.1-Å resolution. Proc. Natl Acad. Sci. USA. 95:1998;3437-3442.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 3437-3442
-
-
Liu, Y.1
Hart, P.J.2
Schlunegger, M.P.3
Eisenberg, D.4
-
83
-
-
0031576990
-
Fast and slow tracks in lysozyme folding: Insight into the role of domains in the folding process
-
Matagne A., Radford S. E., Dobson C. M. Fast and slow tracks in lysozyme folding: insight into the role of domains in the folding process. J. Mol. Biol. 267:1997;1068-1074.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 1068-1074
-
-
Matagne, A.1
Radford, S.E.2
Dobson, C.M.3
-
84
-
-
33845377127
-
Estimation of effective interresidue contact energies from protein crystal structures: Quasi-chemical approximation
-
Miyazawa S., Jernigan R. L. Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation. Macromolecules. 18:1985;534-552.
-
(1985)
Macromolecules
, vol.18
, pp. 534-552
-
-
Miyazawa, S.1
Jernigan, R.L.2
-
85
-
-
0038502170
-
Folding dynamics and mechanism of beta-hairpin formation
-
Muñnoz V., Thompson P. A., Hofrichter J., Eaton W. A. Folding dynamics and mechanism of beta-hairpin formation. Nature. 390:1997;196-199.
-
(1997)
Nature
, vol.390
, pp. 196-199
-
-
Muñnoz, V.1
Thompson, P.A.2
Hofrichter, J.3
Eaton, W.A.4
-
86
-
-
0027530219
-
Termination of right-handed helices in proteins by residues in left-handed helical conformations
-
Nagarajara H. A., Sowdhamini R., Ramakrishnan C., Balaram P. Termination of right-handed helices in proteins by residues in left-handed helical conformations. FEBS Letters. 321:1993;79-83.
-
(1993)
FEBS Letters
, vol.321
, pp. 79-83
-
-
Nagarajara, H.A.1
Sowdhamini, R.2
Ramakrishnan, C.3
Balaram, P.4
-
87
-
-
0001849773
-
Proline isomerization as a rate-limiting step
-
R. H. Pain. Oxford, New York, Tokyo: IRL Press at Oxford University Press
-
Nall B. T. Proline isomerization as a rate-limiting step. Pain R. H. Mechanisms of Protein Folding. 1994;IRL Press at Oxford University Press, Oxford, New York, Tokyo.
-
(1994)
Mechanisms of Protein Folding
-
-
Nall, B.T.1
-
88
-
-
0029908737
-
Initial loss of secondary structure in the unfolding of barstar
-
Nath U., Agashe V. R., Udganokar J. B. Initial loss of secondary structure in the unfolding of barstar. Nature Struct. Biol. 3:1996;920-923.
-
(1996)
Nature Struct. Biol.
, vol.3
, pp. 920-923
-
-
Nath, U.1
Agashe, V.R.2
Udganokar, J.B.3
-
89
-
-
0000329743
-
Symmetry and kinetic optimization of protein like heteropolymers
-
Nelson E. D., Teneyck F., Onuchic J. N. Symmetry and kinetic optimization of protein like heteropolymers. Phys. Rev. Letters. 79:1997;3534-3537.
-
(1997)
Phys. Rev. Letters
, vol.79
, pp. 3534-3537
-
-
Nelson, E.D.1
Teneyck, F.2
Onuchic, J.N.3
-
90
-
-
0031777173
-
Initial hydrophobic collapse is not necessary for folding RNAse A
-
Nöppert A., Gast K., Zirwer D., Damaschun G. Initial hydrophobic collapse is not necessary for folding RNAse A. Fold. Des. 3:1998;213-221.
-
(1998)
Fold. Des.
, vol.3
, pp. 213-221
-
-
Nöppert, A.1
Gast, K.2
Zirwer, D.3
Damaschun, G.4
-
91
-
-
84943502952
-
A molecular dynamics method for simulations in the canonical ensemble
-
Nosé S. A molecular dynamics method for simulations in the canonical ensemble. Mol. Phys. 52:1984;255-268.
-
(1984)
Mol. Phys.
, vol.52
, pp. 255-268
-
-
Nosé, S.1
-
92
-
-
0032568599
-
Folding funnels and frustration in off-lattice minimalist protein landscapes
-
Nymeyer H., García A. E., Onuchic J. N. Folding funnels and frustration in off-lattice minimalist protein landscapes. Proc. Natl Acad. Sci. USA. 95:1998;5921-5928.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 5921-5928
-
-
Nymeyer, H.1
García, A.E.2
Onuchic, J.N.3
-
93
-
-
0030763302
-
Low temperature study of myoglobin ligand rebinding kinetics with Mössbauer spectroscopy
-
Ober C., Burkardt M., Winkler H., Trautwein A. X., Zharikov A. A., Fischer S. F., Paarak F. Low temperature study of myoglobin ligand rebinding kinetics with Mössbauer spectroscopy. Eur. Biophys. J. 26:1997;227-237.
-
(1997)
Eur. Biophys. J.
, vol.26
, pp. 227-237
-
-
Ober, C.1
Burkardt, M.2
Winkler, H.3
Trautwein, A.X.4
Zharikov, A.A.5
Fischer, S.F.6
Paarak, F.7
-
95
-
-
0032539684
-
Is the molten globule a third phase of proteins?
-
Pande V. S., Rokhsar D. S. Is the molten globule a third phase of proteins? Proc. Natl Acad. Sci. USA. 95:1998;1490-1494.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 1490-1494
-
-
Pande, V.S.1
Rokhsar, D.S.2
-
97
-
-
0031940406
-
The early folding kinetics of apomyoglobin
-
Pappu R. V., Weaver D. The early folding kinetics of apomyoglobin. Protein Sci. 7:1998;480-490.
-
(1998)
Protein Sci.
, vol.7
, pp. 480-490
-
-
Pappu, R.V.1
Weaver, D.2
-
98
-
-
0030272670
-
Time-resolved biophysical methods in the study of protein folding
-
Plaxco K. W., Dobson C. M. Time-resolved biophysical methods in the study of protein folding. Curr. Opin. Struct. Biol. 6:1996;630-636.
-
(1996)
Curr. Opin. Struct. Biol.
, vol.6
, pp. 630-636
-
-
Plaxco, K.W.1
Dobson, C.M.2
-
99
-
-
0007463680
-
Statistical mechanics of a correlated energy landscape model for protein folding funnels
-
Plotkin S. S., Wang J., Wolynes P. G. Statistical mechanics of a correlated energy landscape model for protein folding funnels. J. Chem. Phys. 106:1997;2932-2948.
-
(1997)
J. Chem. Phys.
, vol.106
, pp. 2932-2948
-
-
Plotkin, S.S.1
Wang, J.2
Wolynes, P.G.3
-
101
-
-
0029124248
-
Molten globule and protein folding
-
Ptitsyn O. B. Molten globule and protein folding. Advan. Protein Chem. 47:1995;83-230.
-
(1995)
Advan. Protein Chem.
, vol.47
, pp. 83-230
-
-
Ptitsyn, O.B.1
-
103
-
-
36149044755
-
Molecular dynamics simulation of polymer chains with excluded volume
-
Rapaport D. C. Molecular dynamics simulation of polymer chains with excluded volume. J. Phys. A: Math. Gen. 11:1978;L213-L216.
-
(1978)
J. Phys. A: Math. Gen.
, vol.11
-
-
Rapaport, D.C.1
-
104
-
-
0000439253
-
Molecular dynamics study of a polymer chain in solution
-
Rapaport D. C. Molecular dynamics study of a polymer chain in solution. J. Chem. Phys. 71:1979;3299-3303.
-
(1979)
J. Chem. Phys.
, vol.71
, pp. 3299-3303
-
-
Rapaport, D.C.1
-
105
-
-
0001412006
-
The event scheduling problem in molecular dynamics simulation
-
Rapaport D. C. The event scheduling problem in molecular dynamics simulation. J. Comput. Phys. 34:1980;184-201.
-
(1980)
J. Comput. Phys.
, vol.34
, pp. 184-201
-
-
Rapaport, D.C.1
-
106
-
-
0027232632
-
Computer modeling and folding of four helix bundles
-
Rey A., Skolnick J. Computer modeling and folding of four helix bundles. Proteins: Struct. Funct. Genet. 16:1993;199-219.
-
(1993)
Proteins: Struct. Funct. Genet.
, vol.16
, pp. 199-219
-
-
Rey, A.1
Skolnick, J.2
-
107
-
-
0029961470
-
Equilibrium stability and sub-millisecond refolding of a designed single-chain arc repressor
-
Robinson C. R., Sauer R. T. Equilibrium stability and sub-millisecond refolding of a designed single-chain arc repressor. Biochemistry. 35:1996;13878-13884.
-
(1996)
Biochemistry
, vol.35
, pp. 13878-13884
-
-
Robinson, C.R.1
Sauer, R.T.2
-
108
-
-
0002775727
-
Early stage of protein folding
-
R. H. Pain. Oxford, New York, Tokyo: IRL Press at Oxford University Press
-
Roder H., Elöve g. A. Early stage of protein folding. Pain R. H. Mechanisms of Protein Folding. 1994;26-54 IRL Press at Oxford University Press, Oxford, New York, Tokyo.
-
(1994)
Mechanisms of Protein Folding
, pp. 26-54
-
-
Roder, H.1
Elöve, G.A.2
-
110
-
-
0028270634
-
Kinetics of protein folding: A lattice model study of the requirements for folding to the native state
-
Šali A., Shakhnovich E. I., Karplus M. Kinetics of protein folding: a lattice model study of the requirements for folding to the native state. J. Mol. Biol. 235:1994b;1614-1636.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 1614-1636
-
-
Šali, A.1
Shakhnovich, E.I.2
Karplus, M.3
-
111
-
-
0030770294
-
Oligomer formation by 3D domain swapping: A model for protein assembly and misassembly
-
Schlunegger M., Bennett M., Eisenberg D. Oligomer formation by 3D domain swapping: a model for protein assembly and misassembly. Advan. Protein Chem. 50:1997;61-122.
-
(1997)
Advan. Protein Chem.
, vol.50
, pp. 61-122
-
-
Schlunegger, M.1
Bennett, M.2
Eisenberg, D.3
-
112
-
-
4243114736
-
Molecular dynamics study of a three-dimensional one-component model for distortive phase transition
-
Schneider T., Stroll E. Molecular dynamics study of a three-dimensional one-component model for distortive phase transition. Phys. Rev. ser. B. 17:1978;1302-1322.
-
(1978)
Phys. Rev. Ser. B
, vol.17
, pp. 1302-1322
-
-
Schneider, T.1
Stroll, E.2
-
113
-
-
0002698766
-
Modeling protein folding: The beauty and power of simplicity
-
Shakhnovich E. I. Modeling protein folding: the beauty and power of simplicity. Fold. Des. 1:1996;R50-R54.
-
(1996)
Fold. Des.
, vol.1
-
-
Shakhnovich, E.I.1
-
114
-
-
0024357911
-
Formation of unique structure in polypeptide chains. Theoretical investigation with the aid of a replica approach
-
Shaknovich E. I., Gutin A. M. Formation of unique structure in polypeptide chains. Theoretical investigation with the aid of a replica approach. Biophys. Chem. 34:1989;187-199.
-
(1989)
Biophys. Chem.
, vol.34
, pp. 187-199
-
-
Shaknovich, E.I.1
Gutin, A.M.2
-
115
-
-
0542421561
-
Kinetic and structural analysis of submillisecond folding events in cytochrome c
-
Shastry M. C. R., Sauder J. M., Roder H. Kinetic and structural analysis of submillisecond folding events in cytochrome c. Acc. Chem. Res. 31:1998;717-725.
-
(1998)
Acc. Chem. Res.
, vol.31
, pp. 717-725
-
-
Shastry, M.C.R.1
Sauder, J.M.2
Roder, H.3
-
116
-
-
0000449653
-
Molecular dynamic study of entangled hard-chain fluids
-
Smith S. W., Hall C. K., Freeman B. D. Molecular dynamic study of entangled hard-chain fluids. J. Chem. Phys. 104:1996;5616-5637.
-
(1996)
J. Chem. Phys.
, vol.104
, pp. 5616-5637
-
-
Smith, S.W.1
Hall, C.K.2
Freeman, B.D.3
-
117
-
-
0001669870
-
Kinetic and thermodynamic analysis of protein like heteropolymers: Monte Carlo histogram technique
-
Socci N. D., Onuchic J. N. Kinetic and thermodynamic analysis of protein like heteropolymers: Monte Carlo histogram technique. J. Chem. Phys. 103:1995;4732-4744.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 4732-4744
-
-
Socci, N.D.1
Onuchic, J.N.2
-
118
-
-
0000778705
-
Properties and origins of protein secondary structure
-
Socci N. D., Bialek W. S., Onuchic J. N. Properties and origins of protein secondary structure. Phys. Rev. ser. A. 49:1994;3440-3443.
-
(1994)
Phys. Rev. Ser. a
, vol.49
, pp. 3440-3443
-
-
Socci, N.D.1
Bialek, W.S.2
Onuchic, J.N.3
-
121
-
-
0029940033
-
Molecular collapse: The rate-limiting step in two-state cytochrome c folding
-
Sosnick T. R., Mayne L., Englander S. W. Molecular collapse: the rate-limiting step in two-state cytochrome c folding. Proteins: Struct. Funct. Genet. 24:1996;413-426.
-
(1996)
Proteins: Struct. Funct. Genet.
, vol.24
, pp. 413-426
-
-
Sosnick, T.R.1
Mayne, L.2
Englander, S.W.3
-
122
-
-
0016696599
-
Studies on protein folding, unfolding and fluctuations by computer simulations
-
Taketomi H., Ueda Y., Go N. Studies on protein folding, unfolding and fluctuations by computer simulations. Int. J. Pept. Protein Res. 7:1975;445-459.
-
(1975)
Int. J. Pept. Protein Res.
, vol.7
, pp. 445-459
-
-
Taketomi, H.1
Ueda, Y.2
Go, N.3
-
123
-
-
0031285905
-
Kinetic partitioning mechanism as a unifying theme in the folding of biomolecules
-
Thirumalai D., Klimov D. K., Woodson S. A. Kinetic partitioning mechanism as a unifying theme in the folding of biomolecules. Theoret. Chem. Acc. 96:1997;14-22.
-
(1997)
Theoret. Chem. Acc.
, vol.96
, pp. 14-22
-
-
Thirumalai, D.1
Klimov, D.K.2
Woodson, S.A.3
-
124
-
-
0026606219
-
Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K
-
Tilton R. F. Jr, Dewan J. C., Petsko G. A. Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K. Biochemistry. 31:1992;2469-2481.
-
(1992)
Biochemistry
, vol.31
, pp. 2469-2481
-
-
Tilton R.F., Jr.1
Dewan, J.C.2
Petsko, G.A.3
-
125
-
-
0017842051
-
Studies on protein folding, unfolding and fluctuations by computer simulations. II. A three-dimensional lattice model of lysozyme
-
Ueda Y., Taketomi H., Go N. Studies on protein folding, unfolding and fluctuations by computer simulations. II. A three-dimensional lattice model of lysozyme. Biopolymers. 17:1978;1531-1548.
-
(1978)
Biopolymers
, vol.17
, pp. 1531-1548
-
-
Ueda, Y.1
Taketomi, H.2
Go, N.3
-
127
-
-
0025132269
-
Nucleation in protein folding - confusion of structure and process
-
Wetlaufer D. B. Nucleation in protein folding - confusion of structure and process. Trends Biochem. Sic. 15:1990;414-415.
-
(1990)
Trends Biochem. Sic.
, vol.15
, pp. 414-415
-
-
Wetlaufer, D.B.1
-
128
-
-
0030796986
-
Three-state model for lysozyme folding: Triangular folding mechanism with an energetically trapped intermediate
-
Wildegger G., Kiefhaber T. Three-state model for lysozyme folding: triangular folding mechanism with an energetically trapped intermediate. J. Mol. Biol. 270:1997;294-304.
-
(1997)
J. Mol. Biol.
, vol.270
, pp. 294-304
-
-
Wildegger, G.1
Kiefhaber, T.2
-
130
-
-
0040994037
-
Computer studies on fluid systems of hard-core particles
-
Amsterdam, New York: North-Holland/American Elsevier. p. 331
-
Wood W. W. Computer studies on fluid systems of hard-core particles. Fundamental Problems in Statistical Mechanics III. 1975;North-Holland/American Elsevier, Amsterdam, New York. p. 331.
-
(1975)
Fundamental Problems in Statistical Mechanics III
-
-
Wood, W.W.1
-
131
-
-
0028124611
-
Does compactness induce secondary structure in proteins. A study of polyalanine chains computed by distance geometry
-
Yee D. P., Chan H. S., Havel T. F., Dill K. A. Does compactness induce secondary structure in proteins. A study of polyalanine chains computed by distance geometry. J. Mol. Biol. 241:1994;557-573.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 557-573
-
-
Yee, D.P.1
Chan, H.S.2
Havel, T.F.3
Dill, K.A.4
-
132
-
-
0000519105
-
Cytochrome c folding and unfolding: A biphasic mechanism
-
Yeh S., Hun S., Rousseau D. Cytochrome c folding and unfolding: a biphasic mechanism. Acc. Chem. Res. 31:1998;727-736.
-
(1998)
Acc. Chem. Res.
, vol.31
, pp. 727-736
-
-
Yeh, S.1
Hun, S.2
Rousseau, D.3
-
133
-
-
0031475159
-
Folding thermodynamics of a model three-helix bundle protein
-
Zhou Y., Karplus M. Folding thermodynamics of a model three-helix bundle protein. Proc. Natl Acad. Sci. USA. 94:1997;14429-14432.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 14429-14432
-
-
Zhou, Y.1
Karplus, M.2
-
134
-
-
0001351693
-
A first-order disorder-to-order transition in an isolated homopolymer model
-
Zhou Y., Hall C. K., Karplus M. A first-order disorder-to-order transition in an isolated homopolymer model. Phys. Rev. Letters. 77:1996;2822-2825.
-
(1996)
Phys. Rev. Letters
, vol.77
, pp. 2822-2825
-
-
Zhou, Y.1
Hall, C.K.2
Karplus, M.3
-
135
-
-
0001015060
-
Equilibrium thermodynamics of homopolymers and clusters: Molecular dynamics and Monte Carlo simulations of systems with square-well interactions
-
Zhou Y., Karplus M., Wichert J. M., Hall C. K. Equilibrium thermodynamics of homopolymers and clusters: molecular dynamics and Monte Carlo simulations of systems with square-well interactions. J. Chem. Phys. 107:1997;10691-10708.
-
(1997)
J. Chem. Phys.
, vol.107
, pp. 10691-10708
-
-
Zhou, Y.1
Karplus, M.2
Wichert, J.M.3
Hall, C.K.4
-
136
-
-
0033613906
-
Native proteins are surface-molten solids: Application of the Lindemann criterion for the solid versus liquid state
-
Zhou Y., Vitkup D., Karplus M. Native proteins are surface-molten solids: application of the Lindemann criterion for the solid versus liquid state. J. Mol. Biol. 285:1999;1371-1377.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1371-1377
-
-
Zhou, Y.1
Vitkup, D.2
Karplus, M.3
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