Purification and biophysical characterization of a new [2Fe-2S] ferredoxin from Azotobacter vinelandii, a putative [Fe-S] cluster assembly/repair protein

Journal of Biological Chemistry

Volumn 274, Issue 45, 1999, Pages 32402-32410

  Jung, Yean Sung ^a   Gao Sheridan, H Samantha ^a,c   Christiansen, Jason ^b   Dean, Dennis R ^b   Burgess, Barbara K ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b VIRGINIA POLYTECHNIC INSTITUTE AND STATE UNIVERSITY   (United States)

^c HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FERREDOXIN; OXIDOREDUCTASE;

AMINO TERMINAL SEQUENCE; ARTICLE; AZOTOBACTER VINELANDII; ELECTRON SPIN RESONANCE; MASS SPECTROMETRY; MOLECULAR WEIGHT; NONHUMAN; OPERON; OXIDATIVE STRESS; PRIORITY JOURNAL; PROTEIN PURIFICATION; RECEPTOR UPREGULATION; SEQUENCE ANALYSIS; SITE DIRECTED MUTAGENESIS;

AMINO ACID SEQUENCE; AZOTOBACTER VINELANDII; CIRCULAR DICHROISM; DNA REPAIR; DNA, BACTERIAL; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FERREDOXINS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 0033527754     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.274.45.32402     Document Type: Article

References (86)

1. Mortenson, L. E., Valentine, R. C., and Carnahan, J. E. (1962) Biochem. Biophys. Res. Commun. 7, 448-452
2. Lovenberg, W. (ed) (1973) Iron-Sulfur Proteins, Vois. I and II, Academic Press, New York
3. Beinert, H., Holm, R. H., and Münck, E. (1997) Science 277, 653-659
4. Holm, R. H., Kennepohl, P., and Solomon, E. I. (1996) Chem. Rev. 96, 2239-2314
5. Johnson, M. K. (1994) in Encyclopedia of Inorganic Chemistry (King, R. B., ed.) Vol. 4, pp. 1896-1915, Wiley Interscience, New York
6. Cammack, R. (1992) Adv. Inorg. Chem. 38, 281-322
7. Howard, J. B., and Rees, D. C. (1991) Adv. Protein Chem. 42, 199-280
8. Beinert, H. (1990) FASEB J. 4, 2483-2491
9. Lindahl, P. A., and Kovacs, J. A. (1990) J. Cluster Sci. 1, 29-73
10. Beinert, H., Kennedy, M. C., and Stout, C. D. (1996) Chem. Rev. 96, 2335-2373
11. Flint, D. H., and Allen, R. M. (1996) Chem. Rev. 96, 2315-2334
12. Rouault, T. A., Haile, D. J., Downey, W. E., Philpott, C. C., Tang, C., Samaniego, F., Chin, J., Paul, I., Orloff, D., and Harford, J. B. (1992) Biometals 5, 131-140
13. Hentze, M. W., and Kuhn, L. C. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 8175-8182
14. Beinert, H., and Kiley, P. (1996) FEBS Lett. 382, 218-219
15. Gaudu, P., and Weiss, B. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 10094-10098
16. Hidalgo, E., Bollinger, J. M., Jr., Bradley, T. M., Walsh, C. T., and Demple, B. (1995) J. Biol. Chem. 270, 20908-20914
17. Khoroshilova, N., Beinert, H., and Kiley, P. J. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 2499-2503
18. Lazazzera, B. A., Beinert, H., Khoroshilova, N., Kennedy, M. C., and Kiley, P. J. (1996) J. Biol. Chem. 271, 2762-2768
19. Haile, D. J., Rouault, T. A., Harford, J. B., Kennedy, M. C., Blondin, G. A., and Klausner, R. D. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 11735-11739
20. Frey, P. A., and Reed, G. H. (1993) Adv. Enzymol. Relat. Areas Mol. Biol. 66, 1-39
21. Reichard, P. (1993) J. Biol. Chem. 268, 8383-8386
22. Staples, C. R., Ameyibor, E., Fu, W., Gardet-Salvi, L., Stritt-Etter, A.-L., Schürmann, P., Knaff, D. B., and Johnson, M. K. (1996) Biochemistry 35, 11425-11434
23. Broderick, J. B., Duderstadt, R. E., Fernandez, D. C., Wojtuszewski, K., Henshaw, T. F., and Johnson, M. K. (1997) J. Am. Chem. Soc. 119, 7936-7937
24. Peters, J. W., Lanzilotta, W. N., Lemon, B. J., and Seefeldt, L. C. (1998) Science 282, 1853-1858
25. Nicolet, Y., Piras, C., Legrand, P., Hatchikian, C. E., and Fontecilla-Camps, J. C. (1999) Structure 7, 13-23
26. Mataubara, H., and Saeka, K. (1992) Adv. Inorg. Chem. 38, 223-280
27. Chen, J. C., and Mortensen, L. E. (1992) Biochim. Biophys. Acta 1131, 122-124
28. Shethna, Y. I., DerVartanian, D. V., and Beinert, H. (1968) Biochem. Biophys. Res. Commun. 31, 862-867
29. Chatelet, C., and Meyer, J. (1999) J. Biol. Inorg. Chem. 4, 311-317
30. Moshiri, F., Kim, J. W., Fu, C., and Maier, R. J. (1994) Mol. Microbiol. 14, 101-114
31. Scherings, G., Haaker, H., and Veeger, C. (1977) Eur. J. Biochem. 77, 621-630
32. Zheng, L., Cash, V. L., Flint, D. H., and Dean, D. R. (1998) J. Biol. Chem. 273, 13264-13272
33. Morgan, T. V., Lundell, D. J., and Burgess, B. K. (1988) J. Biol. Chem. 263, 1370-1375
34. Stephens, P. J., Jensen, G. M., Devlin, F. J., Morgan, T. V., Stout, C. D., Martin, A. E., and Burgess, B. K. (1991) Biochemistry 30, 3200-3209
35. Yoch, D. C., and Arnon, D. I. (1972) J. Biol. Chem. 247, 4514-4520
36. Le, O., Shen, B., Iismaa, S. E., and Burgess, B. K. (1993) J. Bacteriol. 175, 7707-7710
37. Wientjens, R. (1993) Molecular Cloning of fix A, fix B, fix C, and fix X Genes of Azotobacter vinelandii, PhD. thesis, Agricultural University, Wageningen, The Netherlands
38. Jacobson, M. R., Brigle, K. E., Bennett, L. T., Setterquist, R. A., Wilson, M. S., Cash, V. L., Beynon, J., Newton, W. E., and Dean, D. R. (1989) J. Bacteriol. 171, 1017-1027
39. Raina, R., Bageshwar, U. K., and Das, H. K. (1993) Mol. Gen. Genet. 236, 459-462
40. Raina, R., Reddy, M. A., Ghosal, D., and Das, H. K. (1988) Mol. Gen. Genet. 214, 121-127
41. Rodriguez-Quiñones, F., Bosch, R., and Imperial, J. (1993) J. Bacteriol. 175, 2926-2935
42. Joerger, R. D., and Bishop, P. E. (1988) J. Bacteriol. 170, 1475-1487
43. Gao-Sheridan, H. S., Pershad, H. R., Armstrong, F. A., and Burgess, B. K. (1998) J. Biol. Chem. 273, 5514-5519
44. Reyntjens, B., Jollie, D. R., Stephens, P. J., Gao-Sheridan, H. S., and Burgess, B. K. (1997) J. Biol. Inorg. Chem. 2, 595-602
45. Ta, D. T., and Vickery, L. E. (1992) J. Biol Chem. 267, 11120-11125
46. Martin, A. E., Burgess, B. K., Stout, C. D., Cash, V. L., Dean, D. R., Jensen, G. M., and Stephens, P. J. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 598-602
47. Iismaa, S. E., Vázquez, A. E., Jensen, G. M., Stephens, P. J., Butt, J. N., Armstrong, F. A., and Burgess, B. K. (1991) J. Biol. Chem. 266, 21563-21571
48. Shen, B., Martin, L. L., Butt, J. N., Armstrong, F. A., Stout, C. D., Jensen, G. M., Stephens, P. J., La Mar, G. N., Gorst, C. M., and Burgess, B. K. (1993) J. Biol. Chem. 268, 25928-25939
49. Shen, B., Jollie, D. R., Diller, T. C., Stout, C. D., Stephens, P. J., and Burgess, B. K. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 10064-10068
50. Kemper, M. A., Gao-Sheridan, H. S., Shen, B., Duff, J. L. C., Tilley, G. J., Armstrong, F. A., and Burgess, B. K. (1998) Biochemistry 37, 12829-12837
51. Vázquez, A., Shen, B., Negaard, K., Iismaa, S., and Burgess, B. (1994) Protein Expression Purif. 5, 96-102
52. Gao-Sheridans, H. S. (1998) Engineering Fe-S Cluster Composition and Ligand Coordination in Azotobacter vinelandii ferredoxin I, Ph.D. thesis, University of California, Irvine
53. Tabor, S., and Richardson, C. C. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 1074-1078
54. Burgess, B. K., Jacobs, D. B., and Stiefel, E. I. (1980) Biochim. Biophys. Acta 614, 196-209
55. Hugo, N., Armengaud, J., Gaillard, J., Timmis, K. N., and Jouanneau, Y. (1998) J. Biol. Chem. 273, 9622-9629
56. Aasa, R., and Vänngård, T. (1975) J. Magn. Reson. 19, 308-315
57. Jung, Y.-S., Roberts, V. A., Stout, C. D., and Burgess, B. K. (1999) J. Biol. Chem. 274, 2978-2987
58. Vidakovic, M. S., Fraczkiewicz, G., and Germanas, J. P. (1996) J. Biol. Chem. 271, 14734-14739
59. Sundin, G. W., Shankar, S., Chugani, S. A., Chopade, B. A., Kavanaugh-Black, A., and Chakrabarty, A. M. (1996) Mol. Microbiol. 20, 965-979
60. Blatter, F. R., Plunkett, G., III, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., and Shao, Y. (1997) Science 277, 1453-1474
61. Fleischmann, R. D., Adam, M. D., White, O., Clayton, R. A., Kirkness, E. F., Kerlavage, A. R., Bult, C. J., Tomb, J. F., Dougherty, B. A., Merrick, J. M., McKenney, K., Sutton, G. G., FitzHugh, W., Fields, C. A., Gocayne, J. D., Scott, J. D., Shirley, R., Liu, L.-I., Glodex, A., Kelley, J. M., Weidman, J. F., Phillips, C. A., Spriggs, T., Hedblom, E., Cotton, M. D., Utterback, T. R., Hanna, M. C., Nguyen, D. T., Saudek, D. M., Brandon, R. C., Fine, L. D., Fritchman, J. L., Fuhrmann, J. L., Geoghagen, N. S., Gnehm, C. L., McDonald, L. A., Small, K. V., Fraser, C. M., Smith, H. O., and Venter, J. C. (1995) Science 269, 496-512
62. Clark, M. A., Baumann, L., and Baumann, P. (1998) Curr. Microbiol. 36, 158-163
63. Siuzdak, G. (1996) Maas Spectrometry for Bio/Technology, pp. 56-76, Academic Press, San Diego
64. Pétillot, Y., Forest, E., Meyer, J., and Moulis, J.-M. (1995) Anal. Biochem. 228, 56-63
65. Meyer, J., Gagnon, J., Gaillard, J., Lutz, M., Achim, C., Münck, E., Pétillot, Y., Colangelo, C. M., and Scott, R. A. (1997) Biochemistry 36, 13374-13380
66. Atta, M., Lafferty, M. E., Johnson, M. K., Gaillard J., and Meyer, J. (1998) Biochemistry 37, 15974-15980
67. Mittal, S., Zhu, Y. Z., and Vickery, L. E. (1988) Arch. Biochem. Biophys. 264, 383-391
68. Peterson, J. A, Lorence, M. C., and Amarneh, B. (1990) J. Biol. Chem. 265, 6066-6073
69. Cupp, J. R., and Vickery, L. E. (1988) J. Biol. Chem. 263, 17418-17421
70. Uhlmann, H., Beckert, V., Schwarz, D., and Bernhardt, R. (1992) Biochem. Biophys. Res. Commun. 188, 1131-1138
71. Tsukihara, T., Fukuyama, K., Mizushima, M., Harioka, T., Kusunoki, M., Katsube, Y., Hase, T., and Matsubara, H. (1990) J. Mol. Biol. 216, 399-410
72. Jacobson, B. L., Chae, Y. K., Markley, J. L., Rayment, I., and Holden, H. M. (1993) Biochemistry 32, 6788-6793
73. Peisach, J., Blumberg, W. E., Lode, E. T., and Coon, M. J. (1971) J. Biol. Chem. 246, 5877-5881
74. Farinas, E., and Regan, L. (1998) Protein Sci. 7, 1939-1946
75. Stephens, P. J., Thomson, A. J., Dunn, J. B. R., Keiderling, T. A., Rawlings, J., Rao, K. K., and Hall, D. O. (1978) Biochemistry 17, 4770-4778
76. Cheng, H., Xia, B., Reed, G. H., and Markley, J. L. (1994) Biochemistry 33, 3155-3164
77. Knoell, H.-E., and Knappe, J. (1974) Eur. J. Biochem. 50, 245-252
78. Crouse, B. R., Yano, T., Finnegan, M. G., Yagi, T., and Johnson, M. K. (1994) J. Biol. Chem. 269, 21030-21036
79. Golinelli, M.-P., Chatelet, C., Duin, E. C., Johnson, M. K., and Meyer, J. (1998) Biochemistry 37, 10429-10437
80. Isas, J. M., and Burgess, B. K. (1994) J. Biol. Chem. 269, 19404-19409
81. Coghlan, V. M., and Vickery, L. E. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 835-839
82. Böhme, H., and Haselkorn, R. (1989) Plant Mol. Biol. 12, 667-672
83. Baur, J. R., Graves, M. C., Feinberg, B. A., and Ragsdale, S. W. (1990) Biofactors 2, 197-203
84. Davasse, V., and Moulis, J.-M. (1992) Biochem. Biophys. Res. Commun. 185, 341-349
85. Jouanneau, Y., Duport, C., Meyer, C., and Gaillard, J. (1992) Biochem. J. 286, 267-273
86. Yannone, S. M., and Burgess, B. K. (1998) J. Biol. Inorg. Chem. 3, 253-258