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Volumn 289, Issue 2, 1999, Pages 371-384

The solution structure of the N-terminal proteinase domain of the hepatitis C virus (HCV) NS3 protein provides new insights into its activation and catalytic mechanism

Author keywords

HCV; NMR; NS3; Serine proteinase; Structure

Indexed keywords

CHYMOTRYPSIN; SERINE PROTEINASE;

EID: 0033522886     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1999.2745     Document Type: Article
Times cited : (104)

References (56)
  • 1
    • 0000072463 scopus 로고
    • Confirmation of the assignment of the low field proton resonance of serine proteinases by using specifically nitrogen-15 labeled enzyme
    • Bachovchin W. W. Confirmation of the assignment of the low field proton resonance of serine proteinases by using specifically nitrogen-15 labeled enzyme. Proc. Natl Acad. Sci. USA. 82:1985;7948-7951.
    • (1985) Proc. Natl Acad. Sci. USA , vol.82 , pp. 7948-7951
    • Bachovchin, W.W.1
  • 2
    • 0030862814 scopus 로고    scopus 로고
    • Molecular targets in inhibition of hepatitis C virus replication
    • Bartenschlager R. Molecular targets in inhibition of hepatitis C virus replication. Ann. Chem. Chemother. 8:1997;281-301.
    • (1997) Ann. Chem. Chemother. , vol.8 , pp. 281-301
    • Bartenschlager, R.1
  • 3
    • 12044252858 scopus 로고
    • Methodological advances in protein NMR
    • Bax A., Grzesiek S. Methodological advances in protein NMR. Acct. Chem. Res. 26:1993;131-138.
    • (1993) Acct. Chem. Res. , vol.26 , pp. 131-138
    • Bax, A.1    Grzesiek, S.2
  • 4
    • 0000686943 scopus 로고
    • Viral cysteine proteases are homologuos to the trypsyn-like family of serine proteases: Structural and functional implications
    • Bazan J. F., Fletterick R. J. Viral cysteine proteases are homologuos to the trypsyn-like family of serine proteases: structural and functional implications. Proc. Natl Acad. Sci. USA. 85:1988;7872-7876.
    • (1988) Proc. Natl Acad. Sci. USA , vol.85 , pp. 7872-7876
    • Bazan, J.F.1    Fletterick, R.J.2
  • 5
    • 0021943338 scopus 로고
    • The refinement and the structure of the dimer of α-chymotrypsin at 1.67 Å resolution
    • Blevins R. A., Tulinsky A. The refinement and the structure of the dimer of α-chymotrypsin at 1.67 Å resolution. J. Biol. Chem. 260:1985;4264-4275.
    • (1985) J. Biol. Chem. , vol.260 , pp. 4264-4275
    • Blevins, R.A.1    Tulinsky, A.2
  • 6
    • 0021111661 scopus 로고
    • Refined 2.0 Å X-ray structure of porcine pancreatic kallikrein A
    • Bode W., Chen Z., Bartels K., Kutzbach C., Schmidt G. Refined 2.0 Å X-ray structure of porcine pancreatic kallikrein A. J. Mol. Biol. 164:1983;237-282.
    • (1983) J. Mol. Biol. , vol.164 , pp. 237-282
    • Bode, W.1    Chen, Z.2    Bartels, K.3    Kutzbach, C.4    Schmidt, G.5
  • 7
    • 0021211223 scopus 로고
    • The refined 2.2 Å (0.22 nm) X-ray crystal structure of the ternary complex formed by bovine trypsinogen, valine-valine and the Arg15 analogue of bovine pancreatic trypsin inhibitor
    • Bode W., Walter J., Huber R., Wenzel H. R., Tschesche H. The refined 2.2 Å (0.22 nm) X-ray crystal structure of the ternary complex formed by bovine trypsinogen, valine-valine and the Arg15 analogue of bovine pancreatic trypsin inhibitor. Eur. J. Biochem. 144:1984;185-190.
    • (1984) Eur. J. Biochem. , vol.144 , pp. 185-190
    • Bode, W.1    Walter, J.2    Huber, R.3    Wenzel, H.R.4    Tschesche, H.5
  • 10
    • 0022911065 scopus 로고
    • The structures and proteolytic specificities of autolysed human thrombin
    • Chang J. Y. The structures and proteolytic specificities of autolysed human thrombin. Biochem. J. 240:1986;797-802.
    • (1986) Biochem. J. , vol.240 , pp. 797-802
    • Chang, J.Y.1
  • 12
    • 0024509701 scopus 로고
    • Isolation of a cDNA clone derived from a blood borne non-A non-B viral hepatitis genome
    • Choo Q.-L., Kuo G., Weiner A. J., Bradley L. R. D. W., Houghton M. Isolation of a cDNA clone derived from a blood borne non-A non-B viral hepatitis genome. Science. 244:1989;359-362.
    • (1989) Science , vol.244 , pp. 359-362
    • Choo, Q.-L.1    Kuo, G.2    Weiner, A.J.3    Bradley, L.R.D.W.4    Houghton, M.5
  • 14
    • 0025871254 scopus 로고
    • Structures of larger proteins in solution: Three and four dimensional heteronuclear NMR spectroscopy
    • Clore G. M., Gronenborn A. M. Structures of larger proteins in solution: three and four dimensional heteronuclear NMR spectroscopy. Science. 252:1991a;1390-1399.
    • (1991) Science , vol.252 , pp. 1390-1399
    • Clore, G.M.1    Gronenborn, A.M.2
  • 15
    • 0002608849 scopus 로고
    • Applications of three and four dimensional heteronuclear NMR spectroscopy to protein structure determination
    • Clore G. M., Gronenborn A. M. Applications of three and four dimensional heteronuclear NMR spectroscopy to protein structure determination. Prog. NMR Spectrosc. 23:1991b;43-92.
    • (1991) Prog. NMR Spectrosc. , vol.23 , pp. 43-92
    • Clore, G.M.1    Gronenborn, A.M.2
  • 16
    • 0030064016 scopus 로고    scopus 로고
    • Distinct mechanisms contribute to stringent substrate specificity of tissue-type plasminogen activator
    • Coombs G. S., Dang A. T., Madison E. L., Corey D. R. Distinct mechanisms contribute to stringent substrate specificity of tissue-type plasminogen activator. J. Biol. Chem. 271:1996;4461-4467.
    • (1996) J. Biol. Chem. , vol.271 , pp. 4461-4467
    • Coombs, G.S.1    Dang, A.T.2    Madison, E.L.3    Corey, D.R.4
  • 19
    • 0028851296 scopus 로고
    • An amino-terminal domain of the hepatitis C virus NS3 proteinase is essential for interaction with NS4A
    • Failla C., Tomei L., De Francesco R. An amino-terminal domain of the hepatitis C virus NS3 proteinase is essential for interaction with NS4A. J. Virol. 69:1995;1769-1777.
    • (1995) J. Virol. , vol.69 , pp. 1769-1777
    • Failla, C.1    Tomei, L.2    De Francesco, R.3
  • 21
    • 0028040716 scopus 로고
    • A low-barrier hydrogen bond in the catalytic triad of serine proteinases
    • Frey P. A., Whitt S. A., Tobin J. B. A low-barrier hydrogen bond in the catalytic triad of serine proteinases. Science. 82:1994;1927-1930.
    • (1994) Science , vol.82 , pp. 1927-1930
    • Frey, P.A.1    Whitt, S.A.2    Tobin, J.B.3
  • 22
    • 0023192209 scopus 로고
    • Rat submaxillary gland serine proteinase tonin structure resolution and refinement at 1.8 Å resolution
    • Fujinaga M., James M. N. G. Rat submaxillary gland serine proteinase tonin structure resolution and refinement at 1.8 Å resolution. J. Mol. Biol. 195:1987;373-396.
    • (1987) J. Mol. Biol. , vol.195 , pp. 373-396
    • Fujinaga, M.1    James, M.N.G.2
  • 23
    • 0021881957 scopus 로고
    • Refined structure of α-lytic proteinase at 1.7 Å resolution
    • Fujinaga M., Delbaere T. J., Brayer G. D., James M. N. G. Refined structure of α-lytic proteinase at 1.7 Å resolution. J. Mol. Biol. 183:1985;479-502.
    • (1985) J. Mol. Biol. , vol.183 , pp. 479-502
    • Fujinaga, M.1    Delbaere, T.J.2    Brayer, G.D.3    James, M.N.G.4
  • 24
    • 0025287330 scopus 로고
    • Comparative modeling methods: Application to the family of the mammalian serine proteinases
    • Greer J. Comparative modeling methods: Application to the family of the mammalian serine proteinases. Proteins: Struct. Funct. Genet. 7:1990;317-334.
    • (1990) Proteins: Struct. Funct. Genet. , vol.7 , pp. 317-334
    • Greer, J.1
  • 25
    • 0001449190 scopus 로고
    • Multiple quantum line narrowing for measurements of Hα-Hβ J couplings in isotopically enriched proteins
    • Grzesiek S., Kuboniwa H., Hinck A. P., Bax A. Multiple quantum line narrowing for measurements of Hα-Hβ J couplings in isotopically enriched proteins. J. Am. Chem. Soc. 117:1994;5312-5315.
    • (1994) J. Am. Chem. Soc. , vol.117 , pp. 5312-5315
    • Grzesiek, S.1    Kuboniwa, H.2    Hinck, A.P.3    Bax, A.4
  • 26
    • 0000361013 scopus 로고    scopus 로고
    • Hepatatis C virus
    • B. N. Fields, D. M. Knipe, & P. M. Howley. New York: River Press
    • Houghton M. Hepatatis C virus. Fields B. N., Knipe D. M., Howley P. M. Fields Virology. 1996;1035-1058 River Press, New York.
    • (1996) Fields Virology , pp. 1035-1058
    • Houghton, M.1
  • 30
    • 0028545648 scopus 로고
    • Measurement of HN-H alpha J coupling in calcium free calmodulin using new 2D and 3D water flip back methods
    • Kuboniwa H., Grzesiek S., Delaglio F., Bax A. Measurement of HN-H alpha J coupling in calcium free calmodulin using new 2D and 3D water flip back methods. J. Biomol. NMR. 4:1994;871-878.
    • (1994) J. Biomol. NMR , vol.4 , pp. 871-878
    • Kuboniwa, H.1    Grzesiek, S.2    Delaglio, F.3    Bax, A.4
  • 32
    • 34249765651 scopus 로고
    • NMRView: A computer program for the visualization and analysis of NMR data
    • Johnson B., Blevins R. A. NMRView: a computer program for the visualization and analysis of NMR data. J. Biomol. NMR. 4:1994;603-614.
    • (1994) J. Biomol. NMR , vol.4 , pp. 603-614
    • Johnson, B.1    Blevins, R.A.2
  • 33
    • 0030871616 scopus 로고    scopus 로고
    • Mechanistic role of an NS4A peptide cofactor with the truncated NS3 proteinase of hepatitis C virus: Elucidation of the NS4A stimulatory effect via kinetic analysis and inhibitor mapping
    • Landro J. A., Raybuck S. A., Luong Y. P. C., O'Malley E. T., Haberson S. L., Morgenstern K. A., Rao G., Livingston D. J. Mechanistic role of an NS4A peptide cofactor with the truncated NS3 proteinase of hepatitis C virus: elucidation of the NS4A stimulatory effect via kinetic analysis and inhibitor mapping. Biochemistry. 36:1997;9340-9348.
    • (1997) Biochemistry , vol.36 , pp. 9340-9348
    • Landro, J.A.1    Raybuck, S.A.2    Luong, Y.P.C.3    O'Malley, E.T.4    Haberson, S.L.5    Morgenstern, K.A.6    Rao, G.7    Livingston, D.J.8
  • 34
  • 35
    • 0029962944 scopus 로고    scopus 로고
    • Conservation and variability in the structures of serine proteinases of chymotrypsin family
    • Lesk A., Fordham W. D. Conservation and variability in the structures of serine proteinases of chymotrypsin family. J. Mol. Biol. 258:1996;501-537.
    • (1996) J. Mol. Biol. , vol.258 , pp. 501-537
    • Lesk, A.1    Fordham, W.D.2
  • 36
    • 0030592514 scopus 로고    scopus 로고
    • The crystal strcture of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site
    • Love R. A., Parge H. E., Wickersham J. A., Hostomsky Z., Habuka N., Moomaw E. W., Adachi T., Hostomska Z. The crystal strcture of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site. Cell. 87:1996;331-342.
    • (1996) Cell , vol.87 , pp. 331-342
    • Love, R.A.1    Parge, H.E.2    Wickersham, J.A.3    Hostomsky, Z.4    Habuka, N.5    Moomaw, E.W.6    Adachi, T.7    Hostomska, Z.8
  • 38
    • 0018141241 scopus 로고
    • Hydrogen bonds in serine proteinases and their complexes with protein proteinase inhibitors
    • Markley J. L. Hydrogen bonds in serine proteinases and their complexes with protein proteinase inhibitors. Biochemistry. 17:1978;4648-4656.
    • (1978) Biochemistry , vol.17 , pp. 4648-4656
    • Markley, J.L.1
  • 39
    • 0002104779 scopus 로고
    • Structure of native porcine pancreatic elastase at 1.65 Å resolution
    • Meyer E., Cole G., Radhakrishnan R. Structure of native porcine pancreatic elastase at 1.65 Å resolution. Acta Crystallog. sect. B. 44:1988;26-38.
    • (1988) Acta Crystallog. Sect. B , vol.44 , pp. 26-38
    • Meyer, E.1    Cole, G.2    Radhakrishnan, R.3
  • 40
    • 0022405087 scopus 로고
    • Electron density calculation as an extension of protein structure refinement, Streptomyces griseus proteinase A at 1.5 Å resolution
    • Moult J., Sussman F., James M. N. G. Electron density calculation as an extension of protein structure refinement, Streptomyces griseus proteinase A at 1.5 Å resolution. J. Mol. Biol. 182:1985;555-566.
    • (1985) J. Mol. Biol. , vol.182 , pp. 555-566
    • Moult, J.1    Sussman, F.2    James, M.N.G.3
  • 43
    • 0024285896 scopus 로고
    • Determination of three dimensional structures of proteins from interproton distance data by hybrid distance geometry simulated annealing calculations
    • Nilges M., Clore G. M., Gronenborn A. M. Determination of three dimensional structures of proteins from interproton distance data by hybrid distance geometry simulated annealing calculations. FEBS Letters. 229:1988;317-324.
    • (1988) FEBS Letters , vol.229 , pp. 317-324
    • Nilges, M.1    Clore, G.M.2    Gronenborn, A.M.3
  • 44
    • 0025110477 scopus 로고
    • High resolution three dimensional structure of a single zinc finger from a human enhancer binding protein in solution
    • Omichinski J. G., Clore G. M., Appella E., Sakaguchi K., Gronenborn A. M. High resolution three dimensional structure of a single zinc finger from a human enhancer binding protein in solution. Biochemistry. 29:1990;9324-9334.
    • (1990) Biochemistry , vol.29 , pp. 9324-9334
    • Omichinski, J.G.1    Clore, G.M.2    Appella, E.3    Sakaguchi, K.4    Gronenborn, A.M.5
  • 48
    • 0021102433 scopus 로고
    • Structure of the complex of Streptomyces griseus proteinase B and the third domain of the turkey ovomucoid inhibitor at 1.8 Å resolution
    • Read R. J., Fujinaga M., Sielecki A. R., James M. N. G. Structure of the complex of Streptomyces griseus proteinase B and the third domain of the turkey ovomucoid inhibitor at 1.8 Å resolution. Biochemistry. 22:1983;4420-4433.
    • (1983) Biochemistry , vol.22 , pp. 4420-4433
    • Read, R.J.1    Fujinaga, M.2    Sielecki, A.R.3    James, M.N.G.4
  • 52
    • 0027474021 scopus 로고
    • Refined structure of Sindbis virus core protein and comparison with other chymotripsin-like serine proteinase structures
    • Tong L., Wengler G., Rossmann M. G. Refined structure of Sindbis virus core protein and comparison with other chymotripsin-like serine proteinase structures. J. Mol. Biol. 230:1993;228-247.
    • (1993) J. Mol. Biol. , vol.230 , pp. 228-247
    • Tong, L.1    Wengler, G.2    Rossmann, M.G.3
  • 56
    • 0019793958 scopus 로고
    • Reactivity of human leukocyte elastase and porcine pancreatic elastase toward peptide 4-nitroanilides containing model desmosine residues
    • Yasutake A., Powers J. C. Reactivity of human leukocyte elastase and porcine pancreatic elastase toward peptide 4-nitroanilides containing model desmosine residues. Biochemistry. 20:1981;3675-3679.
    • (1981) Biochemistry , vol.20 , pp. 3675-3679
    • Yasutake, A.1    Powers, J.C.2


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